Basic Information

Insect: Gonocerus acuteangulatus
Gene Symbol: -
Assembly: GCA_946811585.1
Location: CAMPFD010000332.1:519097-523322[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 3.3 6.9e+02 2.9 0.1 2 23 80 100 79 100 0.88

2 18 0.0011 0.22 13.8 8.1 1 23 106 128 106 128 0.98

3 18 0.026 5.4 9.5 0.4 2 23 135 156 134 156 0.95

4 18 0.0067 1.4 11.3 0.2 1 23 162 184 162 184 0.98

5 18 0.0061 1.3 11.5 4.1 1 23 190 212 190 212 0.98

6 18 0.00012 0.026 16.8 2.9 1 23 218 240 218 240 0.97

7 18 9.2e-05 0.019 17.2 0.1 1 23 246 268 246 268 0.98

8 18 0.013 2.6 10.5 1.2 1 23 274 296 274 296 0.98

9 18 0.00017 0.035 16.4 0.4 1 23 302 324 302 324 0.98

10 18 0.035 7.4 9.1 5.1 2 23 330 351 329 351 0.98

11 18 0.079 16 8.0 0.4 1 23 357 379 357 379 0.94

12 18 4.9e-05 0.01 18.1 3.7 1 23 385 407 385 407 0.98

13 18 0.0038 0.8 12.1 0.2 2 20 414 432 413 435 0.91

14 18 0.00032 0.066 15.5 1.0 1 23 441 463 441 463 0.98

15 18 0.13 26 7.3 3.8 1 23 469 491 469 491 0.96

16 18 3.1e-05 0.0065 18.7 1.0 1 23 497 519 497 519 0.99

17 18 0.0022 0.46 12.9 4.2 1 23 525 547 525 547 0.98

18 18 0.23 48 6.5 1.6 2 23 581 602 580 602 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	3.3	6.9e+02	2.9	0.1	2	23	80	100	79	100	0.88
2	18	0.0011	0.22	13.8	8.1	1	23	106	128	106	128	0.98
3	18	0.026	5.4	9.5	0.4	2	23	135	156	134	156	0.95
4	18	0.0067	1.4	11.3	0.2	1	23	162	184	162	184	0.98
5	18	0.0061	1.3	11.5	4.1	1	23	190	212	190	212	0.98
6	18	0.00012	0.026	16.8	2.9	1	23	218	240	218	240	0.97
7	18	9.2e-05	0.019	17.2	0.1	1	23	246	268	246	268	0.98
8	18	0.013	2.6	10.5	1.2	1	23	274	296	274	296	0.98
9	18	0.00017	0.035	16.4	0.4	1	23	302	324	302	324	0.98
10	18	0.035	7.4	9.1	5.1	2	23	330	351	329	351	0.98
11	18	0.079	16	8.0	0.4	1	23	357	379	357	379	0.94
12	18	4.9e-05	0.01	18.1	3.7	1	23	385	407	385	407	0.98
13	18	0.0038	0.8	12.1	0.2	2	20	414	432	413	435	0.91
14	18	0.00032	0.066	15.5	1.0	1	23	441	463	441	463	0.98
15	18	0.13	26	7.3	3.8	1	23	469	491	469	491	0.96
16	18	3.1e-05	0.0065	18.7	1.0	1	23	497	519	497	519	0.99
17	18	0.0022	0.46	12.9	4.2	1	23	525	547	525	547	0.98
18	18	0.23	48	6.5	1.6	2	23	581	602	580	602	0.96

Sequence Information

Coding Sequence: ATGGGAGCGATGTTTATTTTATGCATACTCCTTATCATTTCAGCCTCAACCAATCAGACACGTGTACATACAGGAGAGATACCCATCCTTGGAATTCTTGCGTCTCCGGGGGAATTTGCCATCGCCCTCTTTAGTCTATCCCATGTTGgtaatgATGAATCAATTGATACTAAAGTTAAATTAGAACAACCAAATGGTGATGATTTAAAATTGCGGCACTGGGTTAAAAAAACAGTGAAGTGTCCTTATTGTGCATACCGGGCAGTACCTAACACAATGAAGATCCATGTTAGGAAGCATACAGGAGAACGACCTTTTATGTGCCATCATTGTCAGTATAAATGCACCAGTCTTTCAGGTCTCCGAACGCATATTCAAACTCATAATAAGGACAAACCATTGAAGTGTGGTGACTGCAAATTCGCCACAATGTATCCATCGTCGCTGAAGATGCACCGAGCCCAGCACACTGGGGAAAAGCCTTTCCCTTGTCCCCATTGTTCCTATCGTGCTGCCATACCTGGGACTCTGAAGATCCATCTCAAGTCTCATAGTGATGAAAAAGCTTTTAGTTGTACCTTTTGTTCATACAAAGCCAAATATTTCTCCAGTCTAAAAACCCACCTTAGGACACATACTGGTGATAAACCTCATTCTTGTAAAATTTGTGGTTACCAAACAGCTCACCAAAGTAGTTTAAGATTACACTTAAGAGCCCACTCTGGCGAACGTCCTTACGTGTGCCCTACTTGTTCTTATAGAACTGGTGATCCTAGTTCATTAAAGCAGCATATTTTGATTCACACAAGAGACAAGCGTTTTAAGTGTGAATTATGTGATTTCCGTGCAATTCGCCTAACTCAcattcgagtccatatgctgtCGCATACCAAAGAGAAGAGATATTCTTGTCCTCAATGTTCCTACCGTACAGCATATTCTGGAAGTCTTAAAGTTCATATATCTACCCACGGAGAAAAGACAATGAAGTGCTCCTTGTGTAGTTACCGATGTGCTCATAAACAAGGTTTGAGATTGCATGTTCGAAGACACTCAGGGGAAAAACCATACGCCTGTTCTTATTGTGAATTTCGATCTTTGTCAAAGAATAATCTCAGAATTCATATTTTGGGCCATGAAGGCACAAAGCCTTTTAAATGTGAGTACTGCAGTTTCAGAACTGCGAGAAGTAGTCATCTAAAAAGACATTTGCTCATACATACTAAAACTACCGTCCTGCCATGCCCATTGTGCAATTTCACTACCACTCAGATGTCAAATTTGAAAGCACATGCTTGGACGCACACAAAGCAGAAACCGTACACTTGTGACCAATGTGATTACAGCTCTTCACGTAAGGATGGCCTTCTTGTTCACAAAACCAAGCACAGTGGCGATAAACCTCACGCCTGCCCCGTTTGTGCCCATCGAACTGCTGATTATCGGTGTCTTAGGGTTCACCTTAAAACCCATTCGAACGTGCGGCCCTACAAATGTCAAGAATGTTCGTACGCAGCTAAAAGGCCAGGCCTTCTGAAGAGGCATTATCGTCGTCATACTGGCGAAAAACCCTACCATTGCACCAAGTGCAAATTCAGAGCAAATCGGCCAGAAAATTTGCAAACCCACCTAAAGAAACATCAAAAGGGTTACAAAAGGAAAAATGATTGTTCTCTCTGTGATGGTTCTTATCTCAATCTTCAATTGCATTTATTCAGAGCTCATGCTGATGAAGTACTGAGATGTTTCCATTGTTCGTACTACACGGGTGACTTGTTTTCACTTGCAAAGCACGTTAAAATACACATCAAAAAGCCTAGTCAAGATGAAGAAGAAGTGTGa
Protein Sequence: MGAMFILCILLIISASTNQTRVHTGEIPILGILASPGEFAIALFSLSHVGNDESIDTKVKLEQPNGDDLKLRHWVKKTVKCPYCAYRAVPNTMKIHVRKHTGERPFMCHHCQYKCTSLSGLRTHIQTHNKDKPLKCGDCKFATMYPSSLKMHRAQHTGEKPFPCPHCSYRAAIPGTLKIHLKSHSDEKAFSCTFCSYKAKYFSSLKTHLRTHTGDKPHSCKICGYQTAHQSSLRLHLRAHSGERPYVCPTCSYRTGDPSSLKQHILIHTRDKRFKCELCDFRAIRLTHIRVHMLSHTKEKRYSCPQCSYRTAYSGSLKVHISTHGEKTMKCSLCSYRCAHKQGLRLHVRRHSGEKPYACSYCEFRSLSKNNLRIHILGHEGTKPFKCEYCSFRTARSSHLKRHLLIHTKTTVLPCPLCNFTTTQMSNLKAHAWTHTKQKPYTCDQCDYSSSRKDGLLVHKTKHSGDKPHACPVCAHRTADYRCLRVHLKTHSNVRPYKCQECSYAAKRPGLLKRHYRRHTGEKPYHCTKCKFRANRPENLQTHLKKHQKGYKRKNDCSLCDGSYLNLQLHLFRAHADEVLRCFHCSYYTGDLFSLAKHVKIHIKKPSQDEEEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -