Basic Information

Insect: Gonocerus acuteangulatus
Gene Symbol: salm
Assembly: GCA_946811585.1
Location: CAMPFD010003200.1:32413-55609[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.57 1.2e+02 5.3 0.0 3 20 97 114 96 116 0.91

2 10 5.2e-06 0.0011 21.1 0.9 1 23 357 379 357 379 0.98

3 10 7.1e-06 0.0015 20.7 1.9 1 23 385 407 385 407 0.98

4 10 0.065 14 8.2 3.8 2 23 687 708 686 708 0.98

5 10 6.3e-08 1.3e-05 27.2 0.6 1 23 714 736 714 736 0.97

6 10 0.00071 0.15 14.4 2.7 1 23 746 768 746 768 0.98

7 10 0.0049 1 11.8 2.2 2 23 987 1008 986 1008 0.97

8 10 2.8e-07 5.9e-05 25.1 1.3 1 23 1014 1036 1014 1036 0.99

9 10 1.4e-06 0.0003 22.9 4.0 3 23 1143 1163 1141 1163 0.96

10 10 1.7e-07 3.5e-05 25.8 2.2 1 23 1169 1191 1169 1191 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.57	1.2e+02	5.3	0.0	3	20	97	114	96	116	0.91
2	10	5.2e-06	0.0011	21.1	0.9	1	23	357	379	357	379	0.98
3	10	7.1e-06	0.0015	20.7	1.9	1	23	385	407	385	407	0.98
4	10	0.065	14	8.2	3.8	2	23	687	708	686	708	0.98
5	10	6.3e-08	1.3e-05	27.2	0.6	1	23	714	736	714	736	0.97
6	10	0.00071	0.15	14.4	2.7	1	23	746	768	746	768	0.98
7	10	0.0049	1	11.8	2.2	2	23	987	1008	986	1008	0.97
8	10	2.8e-07	5.9e-05	25.1	1.3	1	23	1014	1036	1014	1036	0.99
9	10	1.4e-06	0.0003	22.9	4.0	3	23	1143	1163	1141	1163	0.96
10	10	1.7e-07	3.5e-05	25.8	2.2	1	23	1169	1191	1169	1191	0.98

Sequence Information

Coding Sequence: ATGTCGAATGAGACAGCGACTCTGAGAGGAGAGGGGATATCACGAAATGATCCTCTAGCAACACAGATTGATAGAGGAAGGATGAGAAGGAagggagaaagagagagggGAGAAGAGGCCACGCCCACCTGTCATAACTGTAGTATATTAGATGATCAGAGACCTCAACCAGCTCCTAACGAGATTCGAATCCTCTTCTCCTACGTGATAATCCAGATATCTTGCCTCTGTGAAAGTTGTTCCGGCTCGGATGAAGAAGCAGCTGCTACAGAGTCATTGGGTCCGTCGTGCGCCCAGTGCGGTGCTGAGTTCGCTAGCTATGCTGAGCTGGCAGAGCATAGCAAGCTCTGTCTGCTCGGCGAAGAAGGCAGCAAGGCCGACGAAGCACGGCGTCAGGACGCAGAAAACAACAACAGCCTTGAAGAGGAGGAACAAGTGGTGTTCCCATTCGGAAGTCCTGGACACGTCACGCTGGAAGCCCTGCAGAACACCAAGGTGGCGGTGGCACAGTTCGCAGCGACGGCGATGGCCAACAATGCTGACAACCCTGCAGCTCTCCAGGAGCTGGCAGTTCTTCAGTCCACTCTCTATACCTTACAGCACCAGCAGATGATGCAACTGAACCTCATCCAGCAACTGCAGCAACAGCTCCAGATCACGAGGCCGAAGGAGTCGACGCCGCCTCTACCTCCGCCAAAGCGAAGCCGCAGCCCGACGCCAGTAAAGCCCGAATCTCCACCTCCAGTGACAGCAGCAGAGACTCCAACGCCTCCCGCATCGGTGCCGGTCCCTCCGCAGCCTTCCCCGCCCGTCTCCTTGCCGCCTTGCTCCATATCGTCGTCCTTTGCTTCCTCCATCATCACAAACCTCGACCCGCCGCCTTCTCCAAGCGAGCCCAACACATTAGAAATGCTTCAACGTCGTGCTCAGGAAGTCTTGGATAATGCCAGTCAAGGCCTTCTTGCCAATAATTTGGCAGATGAGCTCGCTTTTAGAAAGAACGGTGGAAAGGGCAGTATGTCACCGTACGATTCTAAAACTGGAGGAAGGAATGAACCGTTTTTCAAACACCGGTGTCGCTATTGTGGTAAAGTTTTCGGAAGTGACTCTGCCTTGCAAATTCATATCAGGTCCCACACAGGAGAAAGACCATACAAGTGCAATGTTTGCGGGAGCAGGTTTACGACTAAGGGAAACCTTAAAGTTCATTTCCAAAGGCATTCCCAAAAATTTCCGCATATAAAAATGAACCCGAACCCAGTCCCAGAGCACCTGGACAAATATCATCCCCCACTTCTGGCGCAGATGGGTGCTCATCAAAGCCTACCGCCGGGGCCGCCACCCTTCCCTCCCCAGTTCTCACCCCTCTACCGTCCGCCCCACGACCTCGTCCTTCCCCCTCAGAGGTCACACGAACCCGTCAACAAGCCAATCCTACCTGTCAGTGTATTCGGCCCTCGGATAGAGCAAGATATGCCCGAAAATCTGAGTAAGGCCCCGGAATCGACCTCCCCTGACGATTACAAAAAGGAGCCGTCGGAGGAAGAGCCAAGGGAAGAAAGGCTGAGCCCTAAGCGGGAGGTCGAGGTAGAAGGGGAGATGGAAAGGTACCCATCGCCTCCGGTCTACGACGACTGCAGCCTCGACAGCAAGTATACCACAGATGACATCCCCGGAGACAGAGACAGCCCAGGAATTGAAAAGAACGATGACAGTTTCCAGGAGCAACCGGAGAACCTCTCAAATAAAAGTACGTCTGACTTAGGTCATTTATCTTTAACCCCAGATCACAGATTTCAACAATCCGTGAGTTTTCCTAATATAGCCTCACCTCCTAGTAGTACTTCTTCAGGTAGTGTTCATAGATTGACTCCGAGGGGGTTCCTTCCCAACGAACCCGATCCCATTAAAGATCCCGCCTTTTATTCCAGTCTCCTTCCCAGGCCCGGCAGCACCGACAATTCTTGGGAGAGCCTCATCGAGATCACCAAGACGTCGGAGACTTCCAAACTCCAACAATTAGTCGATAATATCGAAAACAAACTTACAGATCCTAACCAATGTGTAATATGTCACAGGGTGCTATCATGCAAAAGCGCCTTACAGATGCATTACCGTACCCACACTGGGGAGCGACCATTCCGTTGTAAGATCTGTGGCAGGGCTTTCACGACGAAGGGCAATTTGAAGACGCATATGGGCGTCCACAGGATCAAGCCACCTATGAGGATGCTCCATCAGTGTCCTGTCTGTCATAAAAAATTCACCAATGGCCTAGTTCTCCAACAACACATTAGGCTACACACAGGAGAGCCAACAGATCTCACGCCCGAACAGATCCAAGCAGCCGAAATCAAAGAGTTTGCTCCTCAGCCAAACTTCCTCCATCATTTTCCTCTCCCTCAACCCTCCCCGAGTCCGAACAAAGACGAGAAGAACGACTACCCTGAAGAGGTGCGGGCTAATTCCATCAGTCCTATTTCCGATGCAGCCTTTTCCACTTCCATAACTGCCCTTGAGAACCAAGTTCGAACAATCACAACTACCGCATCCCATTACCTTCCTTCAAAACTTGTTAATGACCCTGACGATGTTTCGAGTAACAAAGATTATCCAACTCTTACAGTGAATGGTGAGAAGTCTCCAGGACTGGAACGAAGCTGCGCAGGGAGTCCCAGCGGCGCCTCTGATGGTGGCGGTCAGCTGACACCCTCACCAGCAGGACTCGCCTTGACTCGAGAGAGCCCTGCAGCCTCAGAATCCTCATCCCTTGGAGCCCTCGACCTCACACCAAGGTCAACCTCCACCATGTTCCCAGGATTCTTTCCACCAGGGCCTCCGAGTTCAGGATCGCCTCTAATCACCTCTGCTTTGTCGTCACTCACCTCTTCGGTCCTCACGACGACAGCTTTCAACCCGTTGGGGCTCGCCGTAGGACCTCCAGTTCGAGGGAATACAACTTGCCAGATTTGCTTCAAGACTTTTGCCTGCAATTCTGCGCTTGAAATCCACTACAGGAGCCATACCAAGGAGCGTCCGTTCAAGTGCTCCATTTGCGATAGGGGATTTTCAACGAAAgGTAACATGAAGCAGCACATGCTGACCCACAAAATCAGAGACATGCCTCCACACCTCTTCGAGCAGAAAGGCGGGGCAGGAGGACCACCGAGTGTCCCTATCAGCAGTTCGACCGAGAACAGCCTGAGCTGTAGCAGTCAGCCTCCGACTCCTCAGCAACAGACGCAGCCACCCCCGCCAACTCCCCAGATACCTCAGCAGGTCGTCGGCCAGCCGCACGAAGTCCAGCCGCAGTCTGTCAGCCCTCCGGAGCAGAAACCGGAGCTAGGGGTCAAAAGGTCGCCTCCTCAGGGAGACACCCCTTCAATGCCCCTCCCCAAAAGGCAGCCGAGCTTGCCCAAGCACTTGTGCCATGTTTGCAATAAGAACTTCTCCTCATCGTCTGCTCTCCAGATCCACATGAGGACGCACACTGGGGACAAGCCGTTCCGATGTTCTATCTGTCACAAAGCCTTCACCACCAAAGGAAACCTCAAGGTCCATATGGGAACACACATGTGGACAAACGGAGCTTCCAGGCGAGGGAGACGAATGTCGTTAGAGCTGCCGCAGCTGCCCAAAGACACAGAGTTCCTTCACAGGCGGCCCGATCTCTTCTACCCATACCTCCCAGCCCCTTTCCTTAATGGAATACATCAAAAGcTGTCGGAGATGCCGATGAGTGGAGGAGGCGGGAGCCATAACGGAATGATGGCCTTTGGAGGATTCCCTCCGGAGATGAAGGGTGAACCTCACTCCCCCGAGAAGCCGCCTCAATCCGGAACAACACCTCCGTCCCTCTGGGAACTACACTTCGAACGGAAGGCAGAGGAACAGTCCATGCCTCCGCCTCCGAGAGGAGAAGGACTGGCCGCATGA
Protein Sequence: MSNETATLRGEGISRNDPLATQIDRGRMRRKGERERGEEATPTCHNCSILDDQRPQPAPNEIRILFSYVIIQISCLCESCSGSDEEAAATESLGPSCAQCGAEFASYAELAEHSKLCLLGEEGSKADEARRQDAENNNSLEEEEQVVFPFGSPGHVTLEALQNTKVAVAQFAATAMANNADNPAALQELAVLQSTLYTLQHQQMMQLNLIQQLQQQLQITRPKESTPPLPPPKRSRSPTPVKPESPPPVTAAETPTPPASVPVPPQPSPPVSLPPCSISSSFASSIITNLDPPPSPSEPNTLEMLQRRAQEVLDNASQGLLANNLADELAFRKNGGKGSMSPYDSKTGGRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPYKCNVCGSRFTTKGNLKVHFQRHSQKFPHIKMNPNPVPEHLDKYHPPLLAQMGAHQSLPPGPPPFPPQFSPLYRPPHDLVLPPQRSHEPVNKPILPVSVFGPRIEQDMPENLSKAPESTSPDDYKKEPSEEEPREERLSPKREVEVEGEMERYPSPPVYDDCSLDSKYTTDDIPGDRDSPGIEKNDDSFQEQPENLSNKSTSDLGHLSLTPDHRFQQSVSFPNIASPPSSTSSGSVHRLTPRGFLPNEPDPIKDPAFYSSLLPRPGSTDNSWESLIEITKTSETSKLQQLVDNIENKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFRCKICGRAFTTKGNLKTHMGVHRIKPPMRMLHQCPVCHKKFTNGLVLQQHIRLHTGEPTDLTPEQIQAAEIKEFAPQPNFLHHFPLPQPSPSPNKDEKNDYPEEVRANSISPISDAAFSTSITALENQVRTITTTASHYLPSKLVNDPDDVSSNKDYPTLTVNGEKSPGLERSCAGSPSGASDGGGQLTPSPAGLALTRESPAASESSSLGALDLTPRSTSTMFPGFFPPGPPSSGSPLITSALSSLTSSVLTTTAFNPLGLAVGPPVRGNTTCQICFKTFACNSALEIHYRSHTKERPFKCSICDRGFSTKGNMKQHMLTHKIRDMPPHLFEQKGGAGGPPSVPISSSTENSLSCSSQPPTPQQQTQPPPPTPQIPQQVVGQPHEVQPQSVSPPEQKPELGVKRSPPQGDTPSMPLPKRQPSLPKHLCHVCNKNFSSSSALQIHMRTHTGDKPFRCSICHKAFTTKGNLKVHMGTHMWTNGASRRGRRMSLELPQLPKDTEFLHRRPDLFYPYLPAPFLNGIHQKLSEMPMSGGGGSHNGMMAFGGFPPEMKGEPHSPEKPPQSGTTPPSLWELHFERKAEEQSMPPPPRGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01096009;
90% Identity: iTF_01309651;
80% Identity: -