Gacu005023.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Gonocerus acuteangulatus
Gene Symbol
-
Assembly
GCA_946811585.1
Location
CAMPFD010000227.1:502094-514903[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 47 0.21 43 6.7 4.6 2 23 142 163 142 163 0.97
2 47 0.076 16 8.0 3.5 1 23 170 192 170 192 0.98
3 47 0.0046 0.95 11.9 1.3 1 23 198 220 198 220 0.98
4 47 0.0097 2 10.8 0.3 1 23 226 248 226 248 0.98
5 47 0.0039 0.81 12.1 2.3 1 23 254 277 254 277 0.97
6 47 0.81 1.7e+02 4.8 4.0 2 23 286 307 285 307 0.95
7 47 0.066 14 8.2 1.3 1 23 313 336 313 336 0.96
8 47 5 1e+03 2.3 3.4 1 23 346 368 346 368 0.95
9 47 0.001 0.21 13.9 1.0 1 23 374 396 374 396 0.98
10 47 0.044 9.2 8.8 2.2 1 23 402 424 402 424 0.97
11 47 0.15 32 7.1 7.1 1 23 430 452 430 452 0.99
12 47 0.0049 1 11.8 1.1 1 23 458 481 458 481 0.94
13 47 0.0024 0.49 12.8 2.2 1 23 486 508 486 508 0.98
14 47 0.45 94 5.6 7.8 1 23 515 537 515 537 0.98
15 47 0.0018 0.37 13.2 3.9 1 23 543 565 543 565 0.98
16 47 0.078 16 8.0 0.7 2 23 571 592 570 592 0.96
17 47 0.26 53 6.4 6.1 1 23 597 619 597 619 0.99
18 47 0.26 55 6.3 8.3 2 23 626 647 625 647 0.97
19 47 0.0016 0.34 13.3 0.7 1 23 679 701 679 701 0.96
20 47 0.00016 0.034 16.4 1.2 1 23 707 729 707 729 0.98
21 47 0.05 11 8.6 5.7 1 23 735 757 735 757 0.98
22 47 0.49 1e+02 5.5 0.6 2 23 764 785 763 785 0.96
23 47 0.00064 0.13 14.6 0.4 1 23 791 814 791 814 0.95
24 47 0.0029 0.6 12.5 1.0 1 23 820 842 820 842 0.99
25 47 6e-06 0.0013 20.9 0.7 1 23 848 870 848 870 0.97
26 47 0.011 2.3 10.7 0.4 2 23 982 1003 981 1003 0.97
27 47 0.55 1.1e+02 5.3 5.4 1 23 1033 1055 1033 1055 0.98
28 47 0.013 2.8 10.4 1.0 1 23 1061 1083 1061 1083 0.93
29 47 0.0076 1.6 11.2 1.0 1 23 1088 1110 1088 1110 0.97
30 47 0.0016 0.33 13.3 4.2 1 23 1116 1138 1116 1138 0.98
31 47 0.0018 0.38 13.1 2.2 1 23 1144 1166 1144 1166 0.96
32 47 0.00052 0.11 14.8 1.6 1 23 1172 1194 1172 1194 0.96
33 47 0.18 37 6.8 1.3 1 23 1200 1222 1200 1222 0.97
34 47 0.74 1.5e+02 4.9 0.9 1 23 1228 1250 1228 1250 0.95
35 47 0.75 1.6e+02 4.9 5.0 1 23 1256 1278 1256 1278 0.95
36 47 0.38 79 5.8 4.2 1 23 1284 1306 1284 1306 0.98
37 47 0.0022 0.46 12.9 1.7 1 23 1312 1334 1312 1334 0.97
38 47 0.00027 0.056 15.7 1.4 1 23 1340 1362 1340 1362 0.99
39 47 0.025 5.2 9.5 3.3 2 23 1369 1390 1368 1390 0.97
40 47 4.5e-05 0.0093 18.2 2.6 1 23 1396 1418 1396 1418 0.98
41 47 0.19 40 6.8 0.9 2 23 1425 1446 1424 1446 0.96
42 47 0.0073 1.5 11.2 1.2 1 20 1452 1471 1452 1474 0.93
43 47 0.0034 0.72 12.3 1.1 1 23 1480 1502 1480 1502 0.98
44 47 0.017 3.5 10.1 1.6 1 23 1508 1530 1508 1530 0.96
45 47 0.3 63 6.1 5.3 5 23 1539 1557 1536 1557 0.95
46 47 0.011 2.4 10.6 2.8 2 23 1564 1585 1563 1585 0.97
47 47 0.059 12 8.4 3.3 1 23 1591 1613 1591 1613 0.96

Sequence Information

Coding Sequence
ATGCACGATGAAAACGAGACCATTGTACTTTCAGGAAATGTTATCAACATTAAGCAAGAACCCTTGGACATCCCTCCTGAAACTGAAGAAAATTTAGATGAATATGAAGAAAGTGAATTTAACATTAAGGCTGAACCCCCAGACTCGCCAGTATATGAAGATCATGAAATGTTTGAGGGTGGTTATGAAGACGAGGAACAGGCAGCACAGGAAAGTCATCAAGAGGAAGATAATGCTGaagtGCCTCCAAATTGGCAAGTGATGAATATAAAGTTTGAACCTGATGTTCATCCAATTCATCCTACTATGTACGTTAGTAAGGACCAATTGCCAATTGAGTTCAACCAAGCTTCTGATGATGAACCGATGCCTGAACCAGAGCCAGAAGaAGAAAATCTTCGTGGTAAACGGCTAAGGTTAAGACGATGCAATTTCTGCAATTACAAAACAAATCGTGTGAAATTCTTTAGAAGACACATGAAACTTCACAGTGGGAGAGTAAAGGCATTTTCTTGTCCTCACTGTGCATACTTCAGTGGTACAGCTTGCCAACTGCAGTTACACCTCCGAAAGCATACTGGCGAGAAACCTTATGCATGTGATCAGTGTTCTTATCGGACAGCATATCCTCATGCTCTTAAAGTTCATACTAGGAGGCATGATAATATTAAGGCTTATATGTGTAATTTGTGTGACTATGGTACCAATTCAGAACAGGCTCTCAAAGTTCATTTAACCAAACACACTGGTGAAAAAGcttttaaatgtaatgattgtGACTATTGCTCTGCATATCCTAACGCCCTAAAGATGCATAGAGAGAGAAAGCATGGGGATGTTGATGATAGTGAGTTACACTGTCAGTATTGCGATTTCAAGACTTCCGAGCGACGGCAGtataaaattcatttatatagaCACACTGGTGAGAAATTGTTTAGATGTGATAAATGCGATTTTGAAACAATTTACACGTATGCACTTAAGGTACATCGTGAGCGTAGGCATAATCCCTCTAGACCTGGAGAAACAGAATTCTCTTGTGAGTATTGTGAATTCAAAACGTATCgcgaaaaacgttttaaacttcACGTATATTCACACACAGGAGAAAAACCGTATGCTTGTCCTGATTGTAACTACCGGACCCTCTACAATTATAGTCTGAAGCTTCATATGAGGACTCATACAGGTGAGAACTTGTATGCATGTAGTCAATGTGAATATACAACTGCTATTTCGAGCCATTTTCAGACTCATATTTATAAGCATAAAGGTGTTAAACCTTATTCATGCCCTCATTGTGAATATAGAACACGGTGGAGACATTGTTTGAAAGTGCATATTCGAACACATACTGGAGAGAAACCCTTTGCCTGCCCTAAATGTGAGTTTCATTCAGCCAATCCATCTTCActgaaaaatcatattattcaTGTACATAGGGATAAAGAatattcttgtaaaaaatgTGATCACAAAGCTATCTCTTTAGCAAATTTGAAAAATCACCTAAAATCTCATTCCGGAGAAAGTGCACCATTCAAATGTTCATCATGCAGTTATTGCACTTTTAATTCAGGCCACTTTAAAGTTCATCAGTTAAAGCACTCAGGTGAGAAACCCTTTAAATGCAGTCATTGCAGTTTTACCACTGCGAGTTCCTGGTATCTTAAGAAACACCTGAAAATCCATGGTAGGGCTACTATATCTTGTCCTAAGTGTGACTATAATACTGTTTTCCCCTCTAGATTTAAGCTTCATCTCACAAAACACGAAAAGAAGGAATTTAAATGTGACCAATGTGAATTTCATACTTCTTATTCATGGTACTTGAAATACCACAAGCGAAAACATTCAGACACTAAACCTCTTCAGTGCCCCCATTGTGaatataaaacttgtatttcgAGTCACTTAAAAGTACACTTACACAAGCATCTAAAAGACAGTGCAGACATTGATATGACTATTGAACGCTTGTCTGCAGCTGCATCTCTTGATGTCCTAGATCCTCAAGACCCTGAAAAACCATATTTGTGTGAGATTTGTGATTATCGAACTACTAAAGAGAAATATCTGAACCTTCACTTACGAATACATTCatctgaaaaattattttcgtgTACTTTATGCGATTATAAGACTCCTCGGAGAAGCTATCTCCTGATTCATATTAGGAAACATACAGGTGAAAAGCCTTACTCATGCGATTCTTGTGAGTACAGGTGTTCAAGAAAAAGTCGGTTGAATGAACACAAGAAAAAGCATTCTCTAGATAAAGTGCTTAAATGTAAGTCATGCAGTTTTGAAACACCTGATTCTATTAGCCTGAAGGAACATGTGAAGCAACATTCTGAAGATAATGTTTATAAATGCGAAGAGTGCGACTTCGTAACTAGTCTATCTTATAGCCTGAAAGTTCACATGGCACAGCAACATTCAGGGGTCAAACCATACAAATGTAATCAATGCGATTATGCATCAGCACTTCCACATTCTCTTAAGCTACATCTTCAGTCTCATTCAGGCAGCAAACCATACGCCTGCAATCAATGTCCCTTTCGCTTCCGCAATGCTTCTAATTTGAAGGCACATCTACAATATCATTTACAAATGGCTCAAAGGTACAGCTTACTAAAATTGAATAGTATTAGTCCTGAAAGTGTACCTGTGATGCCGTTAAATAGCTTAGTCACAGTACCTGTCAATCTTCCTATTCAAATACCAATAAAAATTCCTGTTGTTAGGCCTGCATCTACCTCAAAAACTGCCATAACTAAAGCTGCTAAGTCTTCTCCATTAAAAGCTGTCAAGGAAGAAAGTACTGAAATTGTTGTCAAATTAAACCCTGCAGAGGTAATTAAAAAGCCTAGATTAAGAAATGAATCCAAATCGTGTAAAGTTACTAAAAGTAAACAACTCCCTGAggcaaaaaaaattaagtgtCCCTATTGTGACTTTTATGCAGTTAGTAAAAACTCActtaaaaatcatgaaaaaatccATAGAAATTGCTGTGAAAATTGTGGTTTCAGATCTTCTGATGAAGCTTCATTTAAACAACATAAATGCAATGGAACTGATTCTAAATCTTTTACTTGTCAATTTTGTGGCTACAGTTCTCCTTTTGTTTATTGTCTTGAGCTTCACCATAGAAAGCACACTGACACAAAGACGTTTTTGTGTGAACTTTGTGAATGCCCTTTCTCAAATCCAGTGCAGCTTCATTCACATCTTGCCGAACATGGGAATGAGAAGTTTTCATGTCCAGATTGTCACTTTGTTACGCCTACTGCTAATGTTCTAAAAAAGCATGTCACCAAGCACAGGGATGAAAAACCATTTAAGTGCTCTCAATGTGACTACCGATGCGCTAAATCGTATTCTTTGAAGTTACATATATTGAAGCATACCGGAGAGAAGCCTCACGCATGTCCTAATTGTGAATTCAGAAGTTCTACTTCGTACTCACTCAAGACACACATAATGAAACACAGTGGGGAAAAGCCTTTCAAGTGTACAGAATGTAATTATTCTGCAACTCATTCGTCTAGTCTAAAAATTCATGTTGCCAATCATTCTAAGGAAAAGAAATTTTCATGTGAACTTTGTGATTACAAAACAGCAATTTTATCATGTTTGAAAGCTCATAATCGCGAACATTCATCTAAAAAACCTTATAAATGTGCTCATTGTGCTTTTGCTACACCTAAATTAAAGTACCTCATAAAGCATACTGCTGATCACTCAGGAGAAAAATCATACTGTTGCCCTCACTGTCAATTCAAAACAAACGAGACCACTCTGTTAAAGCGCCATCTTGATGAACATCCTGAagaaaaaccattttcatgTTCGAAATGTGAGTTCCGTGCTCGAAATTCTCCTCATTTTAAAGCACATTCTAAAAAACACAATGGGATCAATGTTCATTCTTGCCCTGAGTGTGATTATTGTATAGATGTAGCAAACAGTTTAAGAATACATATGAAAAAACATGCAAATGTGTGGCCTTACAAATGCAACCAGTGTGACTATGTTTCTGCAAATCGTGCTAGACTTAAAAAACATCTTAAAAGCCATTCTGGAGAGAAGCctattaaatgtaaagaatgTTCCTACTCATGCTCAAGTGTTAAAGAACTTAATTTGCATCAATTTAAACACTCTGGAAAGAAACCATTTTCGTGTAAATATTGTTCATTTAGTACTGCTAGATCCTCTTACCTTAATATCCACATGAGGAAACATACTGGCGAGAAAGTATTAAGCTGTACATATTGTAATTTCACTGCAACACTTAAAGCAATACTGACACGTCATTTAAAGACACACACCGGAGATAAACCTTATATTTGTGAAGAGTGTGGTTTTAAATCTGCTTCAAAATACCATTTGAAACTACACATTTGGAAACATAGTGACTCAAAGCCATATGCTTGTAAACAATGtggttataaaacaatttacttgACTAGCCTCAAAATACACGAAAGAAAACATTCTGGAGAAAAACCTTTTAACTGTACAGAATGTAGTTTTAAAGGAACAAGCAAGGTTTCATTAAAAAGGCATTTGGTAAAACATGATATTGGAAATGTACACTCTTGTGATTGTGGTTATAAAACAACTACACATTATTCATTGAGAAAACACAAGATTACACATTCTCAGGACAAGCCTTTATCTTGTTCCCAATGCAATTTTAAAACTGCACACAACTGGTCTCTAAAAGTTCATTTGCGAAagcataaaaataagaaaacacatGTTTGCACCAAGTGCAACTTTTCTACtgagagaaaaaaagaatttaatgcTCACAATCTGATGCATAGAAATAGCCTGAGGTCTTTAAAAGACCAGGAAGTAGAAGCTGAAATGGGCAATCAAAAGGCAGATGAAGAGGAAGGGGAAAGCTTGGTAGACTATGGCTTGGGCAATGAAAAAGATATTAAAGATATTGAAAAACCTGAAAAAATAACAACTGAACCTGTTGAAGGCTAG
Protein Sequence
MHDENETIVLSGNVINIKQEPLDIPPETEENLDEYEESEFNIKAEPPDSPVYEDHEMFEGGYEDEEQAAQESHQEEDNAEVPPNWQVMNIKFEPDVHPIHPTMYVSKDQLPIEFNQASDDEPMPEPEPEEENLRGKRLRLRRCNFCNYKTNRVKFFRRHMKLHSGRVKAFSCPHCAYFSGTACQLQLHLRKHTGEKPYACDQCSYRTAYPHALKVHTRRHDNIKAYMCNLCDYGTNSEQALKVHLTKHTGEKAFKCNDCDYCSAYPNALKMHRERKHGDVDDSELHCQYCDFKTSERRQYKIHLYRHTGEKLFRCDKCDFETIYTYALKVHRERRHNPSRPGETEFSCEYCEFKTYREKRFKLHVYSHTGEKPYACPDCNYRTLYNYSLKLHMRTHTGENLYACSQCEYTTAISSHFQTHIYKHKGVKPYSCPHCEYRTRWRHCLKVHIRTHTGEKPFACPKCEFHSANPSSLKNHIIHVHRDKEYSCKKCDHKAISLANLKNHLKSHSGESAPFKCSSCSYCTFNSGHFKVHQLKHSGEKPFKCSHCSFTTASSWYLKKHLKIHGRATISCPKCDYNTVFPSRFKLHLTKHEKKEFKCDQCEFHTSYSWYLKYHKRKHSDTKPLQCPHCEYKTCISSHLKVHLHKHLKDSADIDMTIERLSAAASLDVLDPQDPEKPYLCEICDYRTTKEKYLNLHLRIHSSEKLFSCTLCDYKTPRRSYLLIHIRKHTGEKPYSCDSCEYRCSRKSRLNEHKKKHSLDKVLKCKSCSFETPDSISLKEHVKQHSEDNVYKCEECDFVTSLSYSLKVHMAQQHSGVKPYKCNQCDYASALPHSLKLHLQSHSGSKPYACNQCPFRFRNASNLKAHLQYHLQMAQRYSLLKLNSISPESVPVMPLNSLVTVPVNLPIQIPIKIPVVRPASTSKTAITKAAKSSPLKAVKEESTEIVVKLNPAEVIKKPRLRNESKSCKVTKSKQLPEAKKIKCPYCDFYAVSKNSLKNHEKIHRNCCENCGFRSSDEASFKQHKCNGTDSKSFTCQFCGYSSPFVYCLELHHRKHTDTKTFLCELCECPFSNPVQLHSHLAEHGNEKFSCPDCHFVTPTANVLKKHVTKHRDEKPFKCSQCDYRCAKSYSLKLHILKHTGEKPHACPNCEFRSSTSYSLKTHIMKHSGEKPFKCTECNYSATHSSSLKIHVANHSKEKKFSCELCDYKTAILSCLKAHNREHSSKKPYKCAHCAFATPKLKYLIKHTADHSGEKSYCCPHCQFKTNETTLLKRHLDEHPEEKPFSCSKCEFRARNSPHFKAHSKKHNGINVHSCPECDYCIDVANSLRIHMKKHANVWPYKCNQCDYVSANRARLKKHLKSHSGEKPIKCKECSYSCSSVKELNLHQFKHSGKKPFSCKYCSFSTARSSYLNIHMRKHTGEKVLSCTYCNFTATLKAILTRHLKTHTGDKPYICEECGFKSASKYHLKLHIWKHSDSKPYACKQCGYKTIYLTSLKIHERKHSGEKPFNCTECSFKGTSKVSLKRHLVKHDIGNVHSCDCGYKTTTHYSLRKHKITHSQDKPLSCSQCNFKTAHNWSLKVHLRKHKNKKTHVCTKCNFSTERKKEFNAHNLMHRNSLRSLKDQEVEAEMGNQKADEEEGESLVDYGLGNEKDIKDIEKPEKITTEPVEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-