Basic Information

Insect: Gonocerus acuteangulatus
Gene Symbol: -
Assembly: GCA_946811585.1
Location: CAMPFD010000202.1:200290-202110[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 9.3e-07 0.00019 23.5 0.7 1 23 72 94 72 94 0.98

2 19 5e-06 0.001 21.2 1.7 1 23 100 122 100 122 0.98

3 19 0.0016 0.33 13.3 2.3 1 23 128 150 128 150 0.99

4 19 2.5e-05 0.0053 19.0 0.6 1 23 156 178 156 178 0.98

5 19 4.9e-07 0.0001 24.3 2.1 1 23 184 206 184 206 0.99

6 19 1.2e-05 0.0024 20.0 2.4 1 23 212 234 212 234 0.98

7 19 2.8e-06 0.00058 22.0 0.2 1 23 240 262 240 262 0.98

8 19 1.2e-06 0.00025 23.1 1.6 1 23 268 290 268 290 0.97

9 19 2.2e-07 4.6e-05 25.4 0.4 1 23 296 318 296 318 0.98

10 19 1e-07 2.2e-05 26.5 0.5 1 23 324 346 324 346 0.99

11 19 3e-07 6.2e-05 25.0 2.4 1 23 352 374 352 374 0.99

12 19 0.00028 0.059 15.7 0.6 1 23 380 402 380 402 0.98

13 19 5.9e-08 1.2e-05 27.2 0.5 1 23 408 430 408 430 0.99

14 19 4.8e-05 0.0099 18.1 1.8 1 23 436 458 436 458 0.98

15 19 3.9e-08 8e-06 27.8 0.2 1 23 464 486 464 486 0.98

16 19 2.1e-07 4.3e-05 25.5 1.2 1 23 492 514 492 514 0.99

17 19 3e-05 0.0062 18.7 2.5 1 23 520 542 520 542 0.98

18 19 4.7e-07 9.9e-05 24.4 0.5 1 23 548 570 548 570 0.98

19 19 6.6e-08 1.4e-05 27.1 2.2 1 23 576 598 576 598 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	9.3e-07	0.00019	23.5	0.7	1	23	72	94	72	94	0.98
2	19	5e-06	0.001	21.2	1.7	1	23	100	122	100	122	0.98
3	19	0.0016	0.33	13.3	2.3	1	23	128	150	128	150	0.99
4	19	2.5e-05	0.0053	19.0	0.6	1	23	156	178	156	178	0.98
5	19	4.9e-07	0.0001	24.3	2.1	1	23	184	206	184	206	0.99
6	19	1.2e-05	0.0024	20.0	2.4	1	23	212	234	212	234	0.98
7	19	2.8e-06	0.00058	22.0	0.2	1	23	240	262	240	262	0.98
8	19	1.2e-06	0.00025	23.1	1.6	1	23	268	290	268	290	0.97
9	19	2.2e-07	4.6e-05	25.4	0.4	1	23	296	318	296	318	0.98
10	19	1e-07	2.2e-05	26.5	0.5	1	23	324	346	324	346	0.99
11	19	3e-07	6.2e-05	25.0	2.4	1	23	352	374	352	374	0.99
12	19	0.00028	0.059	15.7	0.6	1	23	380	402	380	402	0.98
13	19	5.9e-08	1.2e-05	27.2	0.5	1	23	408	430	408	430	0.99
14	19	4.8e-05	0.0099	18.1	1.8	1	23	436	458	436	458	0.98
15	19	3.9e-08	8e-06	27.8	0.2	1	23	464	486	464	486	0.98
16	19	2.1e-07	4.3e-05	25.5	1.2	1	23	492	514	492	514	0.99
17	19	3e-05	0.0062	18.7	2.5	1	23	520	542	520	542	0.98
18	19	4.7e-07	9.9e-05	24.4	0.5	1	23	548	570	548	570	0.98
19	19	6.6e-08	1.4e-05	27.1	2.2	1	23	576	598	576	598	0.98

Sequence Information

Coding Sequence: ATGCTACTAAGCGTGAATTGTAGTGACTCAGAATCTATTCACGATTTCCAAAATGTAAGCCAAAATATAGACAGTACTAAACCACTTAGAGAAGAGCTATACAAGAAAACATTGTGTGAagaaaagtcatatacttttgaAGATTCTGGGAAACGGTTAGCCAACAGAGATTCCTTGACTAAACACAAGCCAATCCACAGTGGAGAAAAGCCATTTACATGTAAAGAATGTGGAAAAGGGTTTGCTGACAATAGATCATTGACTAAACACAAGTTAATTCACAGTGAAGAAAAGCTACATACATGTGAagaatgtgggaaagcatttacTCTGAGCTTTTATTTGGCCAAACACAGGCGAATTCACACTAAtcaaaagccatataaatgtgaAAATTGTGAGAAGGCATTTATCTGGTTTCATGAACTAACTAAACACAAGCGAATTCATAGTGGTGAAAACTCTTATACATGTGAAGAATGTGGGAAAGGATTTGTTGATAATATTGTATTGACTAAACACAGGCATATTCACAGTGGAGAAAAGCCGTATACATGTGAagaatgtgggaaagcatttacTCATAGTTCTTATATGGCCAAACACAAGCGAATTCACACTGGAGAAAAGCCACATACATGTACTAAATGTGGGAAAGGATTTATCTGGCCACATGAATTAACCAGACACATGCGAATTCATAGTGGTGAAAAGCCATATTCATGTGAAGATTGTGGAAAAAGATTTGCTGTAAAGATTGCATTGGCTAAGCACAAGCGTATTCACACAGGTGAAAAGCCATTTACATGTGAAGAATGTGGGAAAGGGTTTGTTGACAATAGTACATTGACTAAACACAAACATATTCACAGTAGAAAAAAGCTATATGTATGCAAAGAATGTGGGAAAGGTTTTGCCAACAGGTCTTTATTGATTAAACACAAGAAAATTCACGACGATGAAAAACCTTATACTTGCAACGAATGTGGAAAAGGGTTTATTAACAGAGATTCAATGACTAGACACATGCAAATTCATAGTGGCAAAAAGCCATATACATGTAAAGaatgtggaaaagcatttaCTAGAAGATTCTATTTGGTCAAACACAAGCGAATTCATAGTGGAGAAATGCCTTATGAATGTGAAGAATGTGGGAAACGATCTGCTGACTATACTACATGGACTAGGCACAAGCAAAGTCACAGTGGAGAAAACATATATACGTGTGAAGATTGTGGGAAAGTATTTACACAAAGTGTTTATTTGGCCAAACACAAGCGAATCCACACTGGAGATAAGCCACATACATGTAAAATATGTGGGAAGGGTTTCACCTGGGGTTATCAATTGACCAAACACCAGCGAATTCATACAGGAGAAAAGCCATATGCATGTAAAGAATGTGGGAAAGTATTTGCTGACAGTAGTGCATTGACTAAGCACAAGCGAATTCACAGTGAAGGAAAGATGTATACATGTGAAGAATGTGGGAAAGTATTCACTCAAAGTTTATATTTGACAAAACACAAGCGAATTCACACTGGAGAAAAGCCACATACTTGTAAAATATGTGGGAAGGGTTTCACCTGGGCACATGGCTTGACCAAACACCAGCGAATTCATAGAGGAGAAAAGCCATATGCATGTAAAGAATGTAGGAAAGTATTTGCTGACAGTAGTGCATTGACTAAGCACAAGCGAATTCACAGTGAAGGAAAGATGTATACATGTGAagaatgtgggaaagcattttCCCAGAATTCTCACTTGAAATCGCACAAGCAAATCCATAGTAGAGATAAACCATACAGATTTTAG
Protein Sequence: MLLSVNCSDSESIHDFQNVSQNIDSTKPLREELYKKTLCEEKSYTFEDSGKRLANRDSLTKHKPIHSGEKPFTCKECGKGFADNRSLTKHKLIHSEEKLHTCEECGKAFTLSFYLAKHRRIHTNQKPYKCENCEKAFIWFHELTKHKRIHSGENSYTCEECGKGFVDNIVLTKHRHIHSGEKPYTCEECGKAFTHSSYMAKHKRIHTGEKPHTCTKCGKGFIWPHELTRHMRIHSGEKPYSCEDCGKRFAVKIALAKHKRIHTGEKPFTCEECGKGFVDNSTLTKHKHIHSRKKLYVCKECGKGFANRSLLIKHKKIHDDEKPYTCNECGKGFINRDSMTRHMQIHSGKKPYTCKECGKAFTRRFYLVKHKRIHSGEMPYECEECGKRSADYTTWTRHKQSHSGENIYTCEDCGKVFTQSVYLAKHKRIHTGDKPHTCKICGKGFTWGYQLTKHQRIHTGEKPYACKECGKVFADSSALTKHKRIHSEGKMYTCEECGKVFTQSLYLTKHKRIHTGEKPHTCKICGKGFTWAHGLTKHQRIHRGEKPYACKECRKVFADSSALTKHKRIHSEGKMYTCEECGKAFSQNSHLKSHKQIHSRDKPYRF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -