Gacu014107.2
Basic Information
- Insect
- Gonocerus acuteangulatus
- Gene Symbol
- SMARCC2_1
- Assembly
- GCA_946811585.1
- Location
- CAMPFD010000688.1:279803-298189[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.6e-15 1.5e-11 46.0 0.2 3 44 554 595 552 597 0.95
Sequence Information
- Coding Sequence
- ATGCGGTGCTTTATGGATTTCAAGCCAGGAGGAGCTTTGTGTCATATCCTCGCAACAGTTTATAAGTATAAAAGTGAGCAAGGTTGGAGGAGGTTCGACTTTCAGGTCAGGAGAGTTTTAAAaggaagaattatttttatacttcatTGTGTAGTGATGACTGAACAAAGATATGTTGTGAGTGCTTTGGAAATGTTGCAGAGCCCTTCAAGAATGGATCGGAATGTGGAAATGTTCATGGCTGTCGAAAAAGCTCTAATACAGGCAAAGTGTCTAACTCTGCCATGCGTCTACGTACGTCCCGAGGTTGAGAAGGGCATTGCATTAAAAGTAAAAGATATAATAAAGAGGCATCAGGGATCAGTCAATgAAAATGAAGAAGGAGCGAGCCACATTATCTATCCCGTCGTAGACCCTCTGGATGAAGAGTACGCTCGGCCAGTTCTTCGTCGAGACAAAATGACTCTTATGCATTGGTACTACTTTCCGGATTCTTATGATTCTTGGTATTCTGTGGACCTTCCTATTGATCCACCAGATTCACCACCTCAGCATCAGTTGCCTTGGCGGGTAACTGCATCTTGGGCAATTGAATTGGATATGTATAATGAATGGATGAATGAAGAAGATTATGAAGTAGATGAAAGTGGGAAGAAAAAAGTTCACAAGctcCGGTTGTCAGTTGACGATTTGATGGGCCAGTCTGATTcagcaaccaaaaaaaaacctaaaagaaAGCGGTCTCCTTCTCCAGTACAGAAGCCTGGTAAAAGAAAAAGCGGTAGGAGCTCAATCGTCGGACCTAAAAAGAATAAAAGTGATGAAGAAGAAAATGACTTAACTAGAGATATGGACGATCCAACACCTGAGCCTAACATACAGGAAGTTCCTATGCCCAAACCAGGTCTTTCAAATAACAAGAAAGATAGTGAATGCTTGCCAGTAAAGACAGGTGTAGTTTTAGATTTAGACGAGGAGGCAGCTGAGCGAAATGAAGACAGTCAGATGGGGAAGACCACTGATACTACAACAACACAGGCTACAAATGCTTTAACTAATgaAGCTATGCCTCCAAAAGAAGATGGCCAAGAAGATAATGTTACTGAACAAACACATCACATAATTGTTCCTTCCTATTCCGCATGGTTTGACTACAATTCTGTACATACAATCGAGAAGAGAGCACTGCCTGagttttttaacaataaaaacaagtcAAAAACCCCCGAGATTTATCTCGCCTACCGTAATTTCATGATAGATACTTACAGACTGAATCCTACCGAATACCTCACTTCAACAGCCAGCCGGAGAAATTTGGCAGGAGACGTTTGTGCAATTATGAGAGTTCACGCTTTCCTCGAGCAGTGGGGTCTCATTAATTATCAGGTCGATGCAGATAGCAGACCAACGCCAATGGGTCCTCCTCCAACTTCACACTTCCATGTTCTTGCCGATACTCCATCTGGCCTCATGCCTGTCAATCCTCCTAAGACGCAACAGGGCTCTGCTGCAAAGACTCTCTTGGACATGGGACAGACAAATAAGGCTTCCGTTAAGACTGAGCCAGAACTTGGTAGCAATTTCGGACTCAAATTAGATCAGTACGCCAAGAAACCTGCTGTATTGAAAAATAAGCAAGCAGCATCAGTCACACGGGATTGGACCGAACAAGAGACTCTTCTGTTGCTCGAAGCATTGGAACTTTACAAGGACGATTGGAACAAAGTATGTGAGCATGTTGGTTCAAGGACTCAGGATGAATGCATTTTACATTTCCTTCGACTACCTATAGAAGATCCTTATCTTGAAGACCATGAAGCAGGTGGAGCTTTAGGACCATTAGCTTACCAACCTATTCCATTTTCAAAGGCTGGTAATCCAATTATGTCTACAGTAGCTTTTCTTGCTTCCGTTGTCGATCCGAGAGTAGCTTCCTCTGCTGCAAAGGCAGCCATGATTGAATTTGCAAATATTAAAGATGAAGTTCCCGCTGCGCTTCTGGATCaacatattaaaaatgttgaagcATCTACTGCTGATGGAAAATATGACCCTGCAGCAGGTTTACTTCAGagtgGAATCGCAGGAACAGCGCCAGAAAAAGAAGAGGACTctgaaaaagagaaaaaagagGGAGAGAGCGAACAAAGCAGCGATAGTATTAGCAAAGGGActgaaacagaaaataaatcTGATGACGTTCCAATAAAAGGAGAAGTCGGATCCGAAGAGGAAGCTGAAAAGAAAGAAAGCGAAGAGCCTCCGTCTAAAGAGACCATCGAGAGGGAAAGGTTAGTCAAAGACGCACAGCTTCAGTCAGCAGCAGCTGCAGCTCTCGCAGCGGCAGCAGTGAAGGCAAAGCATTTAGCGGCCGTGGAGGAAAGGAAAATCAAATCACTCGTTGCACTTCTCGTCGAAACTCAAATGAAGAAACTCGAAATTAAACTGAGACACTTCGAAGAGTTGGAGACGACAATGGAAAAAGAAAGAGAAGGCCTCGAATACCAAAGACAGCAGCTTATAGCCGAGAAGCAGCAGTTCCACCTCGAGCAGTTGAAAGCCGCAGAATTTCGAGCGAGACAAGAAGCCGTGAGGAGGCTAGCAGTCGAACAACAAGCTATGCCTGCGTCACCTGCTTCTCAACAGCAACAACTTCCTCCTCCTCCACCTCCGCCTTCGACTGTCCAATGA
- Protein Sequence
- MRCFMDFKPGGALCHILATVYKYKSEQGWRRFDFQVRRVLKGRIIFILHCVVMTEQRYVVSALEMLQSPSRMDRNVEMFMAVEKALIQAKCLTLPCVYVRPEVEKGIALKVKDIIKRHQGSVNENEEGASHIIYPVVDPLDEEYARPVLRRDKMTLMHWYYFPDSYDSWYSVDLPIDPPDSPPQHQLPWRVTASWAIELDMYNEWMNEEDYEVDESGKKKVHKLRLSVDDLMGQSDSATKKKPKRKRSPSPVQKPGKRKSGRSSIVGPKKNKSDEEENDLTRDMDDPTPEPNIQEVPMPKPGLSNNKKDSECLPVKTGVVLDLDEEAAERNEDSQMGKTTDTTTTQATNALTNEAMPPKEDGQEDNVTEQTHHIIVPSYSAWFDYNSVHTIEKRALPEFFNNKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTASRRNLAGDVCAIMRVHAFLEQWGLINYQVDADSRPTPMGPPPTSHFHVLADTPSGLMPVNPPKTQQGSAAKTLLDMGQTNKASVKTEPELGSNFGLKLDQYAKKPAVLKNKQAASVTRDWTEQETLLLLEALELYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDHEAGGALGPLAYQPIPFSKAGNPIMSTVAFLASVVDPRVASSAAKAAMIEFANIKDEVPAALLDQHIKNVEASTADGKYDPAAGLLQSGIAGTAPEKEEDSEKEKKEGESEQSSDSISKGTETENKSDDVPIKGEVGSEEEAEKKESEEPPSKETIERERLVKDAQLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEKEREGLEYQRQQLIAEKQQFHLEQLKAAEFRARQEAVRRLAVEQQAMPASPASQQQQLPPPPPPPSTVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01309355; iTF_00763800; iTF_01298306; iTF_00154448;
- 90% Identity
- iTF_01309355;
- 80% Identity
- -