Gacu013622.1
Basic Information
- Insect
- Gonocerus acuteangulatus
- Gene Symbol
- lov
- Assembly
- GCA_946811585.1
- Location
- CAMPFD010000658.1:480-1007[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-10 2.1e-07 32.4 0.1 17 44 1 28 1 29 0.95
Sequence Information
- Coding Sequence
- atgacCACTTCTCAAGCTTCTCGAATATTTGGCATCCCATATAATAGCCTGTTAATGTATGTGCGAGGTAAGTATGGGAAGTCGTTGAAACTCGAGCAACTTAAAAAGGAATGTTTTGGTGAGCTTGGAGGTCCACTCGACCTCATTGGGTTAGGTAATATTTCGAACAACAACAATCCTCCGAAGCCGAAGATGCCCGAACCAGACCTTATGCTAGGGCCTCCTGGTTTTAATCCAGGCCCTTACCCGACTGCCAACTTCTATCCCGATTTCGGCGCATCATTTCCTGTGCCAGTAGGAATGGTCCACTTGCTTCCtcaatctgaaaaaaatagagAACCTGTCGATTTTGCTAAAGAAGAGTCGAGAGCAACTCCTATGGAGTATCATAAAGAAGACCTTAGGAACTCTCCAATGGCTCTCGATTTCGTAAAAGAAGAAACACATGGGAACAATTGTATCGAGAACGATGAATCGAGCAGTCCACGGAACAGGGAGATGCAGCAAACACAAAACGGTCAGGATTGA
- Protein Sequence
- MTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLKKECFGELGGPLDLIGLGNISNNNNPPKPKMPEPDLMLGPPGFNPGPYPTANFYPDFGASFPVPVGMVHLLPQSEKNREPVDFAKEESRATPMEYHKEDLRNSPMALDFVKEETHGNNCIENDESSSPRNREMQQTQNGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00757237;
- 90% Identity
- iTF_00757237;
- 80% Identity
- iTF_00757237;