Gacu039873.1
Basic Information
- Insect
- Gonocerus acuteangulatus
- Gene Symbol
- retn
- Assembly
- GCA_946811585.1
- Location
- CAMPFD010002500.1:5043-9676[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-15 2.7e-11 45.5 0.0 9 79 160 227 153 228 0.87
Sequence Information
- Coding Sequence
- ATGAGTATTCTCGTCTTGGAACTATGGCTGCTGACTGGAGCGGAACGACGGTATGGTAATGCAGATGATGAGGGGTATCGAAGACAGGAGGAATCAGCAAGGCTCTCGGGGAATCCACAATGGCCCCCGCCAACAGGCAACCTGTTTACGGCCCTTCCTGGAAGGACCAATAACTGCGGTGAAGCTATATATAACAGACGAGACGGAAGGATTGAATTAGGCTCTCGTAACTCCATTATAATCTCGCGGTCATCTTTTAATGCCCCGACCTCGGACCCGAAGAGCAGATTCAATTTCCAGGGCTCATTTGATATGAAGACCATGAAGCGGGCTCAAATACCGTATACTGAGAAATTGCGAAAATATCGGCTGGAAGATATGTATGGTCTTCAACCCGCAAGGGTAAGAGCTCTTTATTACCTCGACAATGGGCTCATCCCAAAAACAACAATTGCCGCGGCTTATTATAGACGGGAACTGCGTCAAAATGCCCGAATAGgtactCCAATAAACCGACTACCAATCATGGCGAAATCAGTTTTGGACCTGTACGAGCTCTACAACCTCGTCATCCAGCGCGGTGGTCTAGTCGACGTcatcaataagaaattgtggcaaGAAATCATCAAAGGTCTTCATCTGCCTTCATCCATCACATCGGCAGCATTCACACTCCGGACACAGTAA
- Protein Sequence
- MSILVLELWLLTGAERRYGNADDEGYRRQEESARLSGNPQWPPPTGNLFTALPGRTNNCGEAIYNRRDGRIELGSRNSIIISRSSFNAPTSDPKSRFNFQGSFDMKTMKRAQIPYTEKLRKYRLEDMYGLQPARVRALYYLDNGLIPKTTIAAAYYRRELRQNARIGTPINRLPIMAKSVLDLYELYNLVIQRGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -