Basic Information

Gene Symbol
-
Assembly
GCA_946811585.1
Location
CAMPFD010000042.1:319179-329562[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 0.16 1.8e+03 1.2 0.0 49 66 301 317 297 323 0.78
2 9 0.0065 73 5.7 0.0 45 67 314 336 306 349 0.74
3 9 0.0028 32 6.9 0.1 39 68 326 355 322 367 0.72
4 9 0.00078 8.7 8.7 0.0 37 71 360 392 357 403 0.77
5 9 0.0013 15 7.9 0.0 37 68 396 427 392 439 0.78
6 9 0.0055 62 5.9 0.0 45 67 440 462 432 475 0.74
7 9 0.0037 41 6.5 0.1 40 67 453 480 448 493 0.73
8 9 0.002 23 7.3 0.1 38 68 469 499 462 511 0.76
9 9 0.0053 60 6.0 0.0 38 65 505 532 494 539 0.73

Sequence Information

Coding Sequence
ATGCGGATTGAACTTTTCTATCTTACTGAATGGGCTACAGCGTGTATTCCCTATAGGAATCAGGTACCTGTAAACTATCTAGTCAAACAGCTATACCATGATAAAGGACCGGTTCTAGTTCGAAATATCCTCGCTAACGTCAGGGAATTCATTCTAAGCGTGTTCAACCTTGATGTGTTTACCTTTACTTTCAGGGAATTCATTCTAAGCGTGTTCAACCTTGATGTATTTACCTTTACTTTCAGGGAATTCATTCTAAGCGTGTTCAACCTTGATGTATTTACCTTTACTTTCAGGGAATTCATTCTAAGCGTGTTCAACCTTGATGTGTTTACCTTTACTTTCAGGGAATTCATTCTAAGCGTGTTCAACCTTGATGTGTTTACCTTTACTTTCAGGGAATTCATTCTAAGCGTGTTCAACCTTGATGTGTTTACCTTTACTTTCAGGGAATTCATTCTAAGCGTGTTCAACCTTGATGTGTTTACCTTTACTTTCAGGGAATTCATTCTAAGCCTGTTCAACCTTGAGGTGTTTACCTTTACTTTCAGGGAATTCATTCTAAGCGTGTTCAACCTTGATGTGTTTACCTTTACTTTCAGGGAATTCATTCTAAGCGTGTTCAACCTTGATGTGTTTACCTTTACTTTCAGGGAATTCATTCTAAGCGTGTTCAACCTTGATGTGTTTACCTTTACTTTCAGGGAATTCATTCTAAGCGTGTTCAACCTTGATGTGTTTACCTTTACTTTCAGGGAATTCATTCTAAGCGTGTTCAACCTTGATGTGTTTACCTTTACTTTCAGGGAATTCATTCTAAGCGTGTTCAACCTTGATGTGTTTACCTTTACTTTCAGGGAATTCATTCTAAGCGTGTTCAACCTTGATTATACCCCCGATGTCACTAATAAAGCATGGAGAGAGATAGGGACATATTTTGGATACACCCCCGTTGTCACTAATAAAGCATGGAGAGAGATAGGGAAATATTTTGGATACACCCCCGTTGTCACTAATAAAGCATGGAGAGAGATAGGGAAATATTTTGGATATACCCCCGTTGTCACTAATAAAGCATGGAGAGAGATAGAGAAATATTTTGGATACACCCCCGTTGTCACTAATAAAGCATGGAGAGAGATAGGGAAATATTTTGGATATACCCCCGCTGTCACTAATAAAGCATGGAGAGAGATAGAGAAATATTTTGGATACACCCCCGTTGTCTCTAATAAAGCATGGAGAGAGATAGGGAAATATTTTGGATACACCCCCGTTGTCTCTAATAAAGCACGGAGAGAGATAGGGAAATATTTTGGATACACCCCCGTTGTCACTAATAAAGCATGGAGAGAGATAGGGAAATATTTTGGATATACCCCCGTTGTCACTAATAAAGCATGGAGAGAGATAGGGAAATATTTTGGATATACCCCCGTTGTCACTAATAAAGCATGGAGAGAGATAGGGAAATATTTTGGATATACCCCCGCTGTCACTAATAAAGCATGGAGAGAGATAGGGAAATATTTTGGATATACCCCCGTTGTCACTAATAAAGCATGGAGAGAGATAGGGAAATATTTTGGATATACCCCGCTGTCACTAATAAAGCATGGAGAGAGATAG
Protein Sequence
MRIELFYLTEWATACIPYRNQVPVNYLVKQLYHDKGPVLVRNILANVREFILSVFNLDVFTFTFREFILSVFNLDVFTFTFREFILSVFNLDVFTFTFREFILSVFNLDVFTFTFREFILSVFNLDVFTFTFREFILSVFNLDVFTFTFREFILSVFNLDVFTFTFREFILSLFNLEVFTFTFREFILSVFNLDVFTFTFREFILSVFNLDVFTFTFREFILSVFNLDVFTFTFREFILSVFNLDVFTFTFREFILSVFNLDVFTFTFREFILSVFNLDVFTFTFREFILSVFNLDYTPDVTNKAWREIGTYFGYTPVVTNKAWREIGKYFGYTPVVTNKAWREIGKYFGYTPVVTNKAWREIEKYFGYTPVVTNKAWREIGKYFGYTPAVTNKAWREIEKYFGYTPVVSNKAWREIGKYFGYTPVVSNKARREIGKYFGYTPVVTNKAWREIGKYFGYTPVVTNKAWREIGKYFGYTPVVTNKAWREIGKYFGYTPAVTNKAWREIGKYFGYTPVVTNKAWREIGKYFGYTPLSLIKHGER

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-