Gleg004879.1
Basic Information
- Insect
- Goniozus legneri
- Gene Symbol
- nfxl1
- Assembly
- GCA_003055095.1
- Location
- NCVS01000949.1:100433-104460[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1.1 7.8e+03 -3.3 1.1 15 19 125 129 124 129 0.81 2 18 0.068 4.8e+02 0.6 0.4 4 10 160 166 159 166 0.96 3 18 1.6e-07 0.0011 18.6 14.8 1 18 174 190 174 191 0.98 4 18 4.3e-07 0.003 17.2 16.7 1 19 228 245 217 245 0.90 5 18 0.8 5.6e+03 -2.8 1.8 5 10 269 274 269 274 0.91 6 18 2.5e-06 0.017 14.8 9.0 1 18 280 298 280 299 0.93 7 18 6.4e-05 0.45 10.2 8.4 1 18 335 352 335 353 0.97 8 18 0.0032 22 4.8 9.0 1 12 387 398 387 398 0.94 9 18 1e-07 0.00073 19.2 13.6 3 19 420 436 418 436 0.92 10 18 9.7e-05 0.68 9.7 7.4 10 19 485 494 482 494 0.90 11 18 0.0048 34 4.3 5.8 1 12 504 514 504 514 0.95 12 18 0.89 6.3e+03 -3.0 5.8 14 18 545 549 545 550 0.89 13 18 1.8 1.3e+04 -3.9 0.5 9 12 567 570 567 570 0.75 14 18 0.2 1.4e+03 -0.9 0.5 6 10 576 580 575 581 0.85 15 18 0.00053 3.7 7.3 5.6 1 12 586 597 586 597 0.94 16 18 1.6 1.1e+04 -3.8 5.5 5 10 611 616 608 616 0.58 17 18 0.00021 1.5 8.6 15.5 3 19 625 641 624 641 0.94 18 18 7.1e-05 0.5 10.1 10.8 1 16 685 699 685 705 0.88
Sequence Information
- Coding Sequence
- atgcaaaaattcacgaaaatcaGGATACAAAACCAAATTGCTATTGAGAAACATTTagaattgaataatgaattgCTCACATCTAGCGAAGATGAAGAGGAAGATATTGAGCAAGTGCAAAAAAGCGTTGACCAAATTATGTCATCGTATGAAGGACAAAAGTCTGATGCAGAGAAAATGCTATCATTCTTGATCAATACTTTTCAATCTGGAGGAACAGTttgtttaatttgtatttcatcaattaaaaaagttgatGCTATATGGAACTGCAGTAAATGTTATTCTTCGATACACATATCTTGCATATTGCATTGGATACGTGatagtttaaaatataaacgagAAAATGGAATTACTCCTGTTTGGGCATGtcCAAAATGTCGTACTGATTATGGAGAAGATGAAATTCCATCACGCTATAAATGTTTTTGTGGTAAAACCGAAGATCCTCCGTATCAACCATGGAGTATTCCACATTCTTGTGGAGAGGTATGTGGAAAAGTACTAAAGCCAGAATGCGGCCATTCGTGCGTTCTGTTGTGTCATCCAGGACCGTGTCCTCCTTGTGCCAAAATGATAACTCAGAATTGTTATTGCGAAAAGGAGATGCAGAAACCTCGTCGATGTAATTCCAAATATTGGAGCTGTGGCAAAATATGCGGTAAGAAATATACTTCTTGTTCCCATCAATGCAAAGAGATATGCCACGAGGGTTCCTGTCCCCCATGTTCGGTGGTTATATCAGCAAAATGTAACTGCGGGGCACAGAAAGAGGACAAATTCTGTCAAGACAGAGAGTGGAAATGTAAAAAACCATGTAACAAATTACTATCGTGTAATATACACGTATGTAAAGAAGTTTGTCATAAATCTGGGGACTGCGGGTCTTGTCTGGTAGATAAAAACAGAACTTGTCCCtgtggaaagaaaaagtacAATATATCTTGCAAACAACAACACGTACCAACATGTGGAGACACATGTGGCAAATTACTGGAATGTGGTTCGCATTTCTGCAATATGCGTTGCCACACCGATAACTGTGGCCAATGTTTAGAAATCATAGAAAAAACCTGCAGATGCGAATcttacaaaaaagaaatagctTGTACCaaagaatttcattgtaacaaaaaatgttccCAGTTGCGTCTCTGCGGTAAACATCAGTGCAACCGTAAATGCTGCGATTGcatgataaaaaatgtaagaaaagcGTGCGAGAAAATGTGCAATAACACTCTTAGCTGTAAGAAGCACAAATGCGCCTCTCCGTGTCACAGCGGGCCTTGTTATCCGTGCTCTCGTACAGACACGATACAATGCCGCTGTGGGAATAGCAAAATAACCGTTCCTTGTGGTACAAGGAAGAAAATCAAACCTCCGCCTTGTTACAAAATGTGCAAGATTCCACCTCGCTGTCACCACTTGAAGAGGGAATCTCATAGGTGCCATCAAGGCAACTGCCCACcgtgtagaaaaatttgtaatttagcGCACAAAAATTGTGGACACCCGTGCCCTGTAATCTGCCATACAGAGGTACTAACAAAAGTTAAGTTGAACGGGGTTTCGCAACCTGCTGGTCCATGGGAGAAGGAGACGTTTGGTTTTCAGTACAAAACTACGCCCTGTCCGCCCTGCGAGGTATCGATAATGGTGACTTGCTTAGGCGGCCATGAAACTTTGCCTTGGCCTTGTCACTCGTCGACCCCTACGTCCTGTCAAAGGCCATGCGGGCGAACGCTCAACTGTACAAATCACTCTTGTCAGCTTTTGTGTCATACCGTTAAGACGTCAGAGAACTCTGATGGTATTCCTTGTCCCACTTGCGAAGAACCGTGCACGTTATCTCGACCCGAGGGTTGCATTCATTTATGTCCAAAGCCCTGCCACGAGGCACCTTGTCCACCTTGCAAGCAGCTGGTACGCGTCTCGTGCCACTGCGGCATTAGCACTTTGTACAAGCGTTGCAAAGAACTCACTTCTACTATAATAGATAAGACGGATTTGCTAAAATGTGGGAACCAGTGTCCTAAAAATTATCCTTGCGGCCATCGTTGCGTACAAAATTGTCATCCAGGCTTGTGCAAGGATAGCGACAAGTGCAGTAAGAAAGTGAAGGTCTTCTGCAAGTGCAAGCGTATCAAGAAGGATTACGTATGCTACCAAACGCAGAGAGAGAATATAACAGTTTCGTGTGATGCATCCTGTGATCGAATCaaagaagaaaaggagaaagcCAAAGAAATAGCTTTAGCGCAACAAAGACAGGCGGAAGAGTTACGGAATCAAGAAGAAGTACTGAagttcgaaagaaaattcaaacctCGTAGAAAAGGAAAAGACAAGAACGAGAAGAAGAGTCAACATAGTGATAATTATAGCAATTTTAGCATAAAACTAATTGCTCGATTAGTTCATAAGATTCGAGTGCAATTGGTGGGGTCCCCTGGGTCACGCAGCTCAAAGACACCGCTGTTGCCCTCTTTGTCCATACCGCAAGCTGAAAAGCACGGAAGAAGACTGTACACCGTTGCTTGCTCTAAAGATAACGCTGCGTCTACATGTCCAGGAATAGCGTCGTGA
- Protein Sequence
- MQKFTKIRIQNQIAIEKHLELNNELLTSSEDEEEDIEQVQKSVDQIMSSYEGQKSDAEKMLSFLINTFQSGGTVCLICISSIKKVDAIWNCSKCYSSIHISCILHWIRDSLKYKRENGITPVWACPKCRTDYGEDEIPSRYKCFCGKTEDPPYQPWSIPHSCGEVCGKVLKPECGHSCVLLCHPGPCPPCAKMITQNCYCEKEMQKPRRCNSKYWSCGKICGKKYTSCSHQCKEICHEGSCPPCSVVISAKCNCGAQKEDKFCQDREWKCKKPCNKLLSCNIHVCKEVCHKSGDCGSCLVDKNRTCPCGKKKYNISCKQQHVPTCGDTCGKLLECGSHFCNMRCHTDNCGQCLEIIEKTCRCESYKKEIACTKEFHCNKKCSQLRLCGKHQCNRKCCDCMIKNVRKACEKMCNNTLSCKKHKCASPCHSGPCYPCSRTDTIQCRCGNSKITVPCGTRKKIKPPPCYKMCKIPPRCHHLKRESHRCHQGNCPPCRKICNLAHKNCGHPCPVICHTEVLTKVKLNGVSQPAGPWEKETFGFQYKTTPCPPCEVSIMVTCLGGHETLPWPCHSSTPTSCQRPCGRTLNCTNHSCQLLCHTVKTSENSDGIPCPTCEEPCTLSRPEGCIHLCPKPCHEAPCPPCKQLVRVSCHCGISTLYKRCKELTSTIIDKTDLLKCGNQCPKNYPCGHRCVQNCHPGLCKDSDKCSKKVKVFCKCKRIKKDYVCYQTQRENITVSCDASCDRIKEEKEKAKEIALAQQRQAEELRNQEEVLKFERKFKPRRKGKDKNEKKSQHSDNYSNFSIKLIARLVHKIRVQLVGSPGSRSSKTPLLPSLSIPQAEKHGRRLYTVACSKDNAASTCPGIAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -