Gleg004875.1
Basic Information
- Insect
- Goniozus legneri
- Gene Symbol
- Zfy1
- Assembly
- GCA_003055095.1
- Location
- NCVS01000949.1:77140-83194[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 4.6 3.6e+02 1.6 1.0 1 23 83 108 83 108 0.86 2 19 0.42 33 4.9 0.8 2 23 121 142 121 143 0.90 3 19 6.1 4.7e+02 1.3 4.7 1 23 149 171 149 171 0.97 4 19 0.03 2.3 8.5 0.7 2 23 177 198 176 198 0.97 5 19 7.5 5.8e+02 1.0 0.9 1 23 204 226 204 227 0.92 6 19 0.0016 0.13 12.5 5.7 2 23 472 494 471 494 0.96 7 19 1.8 1.4e+02 2.9 1.1 1 23 561 583 561 583 0.81 8 19 1.1 87 3.6 1.3 2 23 749 770 748 770 0.96 9 19 0.14 11 6.4 0.2 2 23 785 806 784 806 0.93 10 19 0.0074 0.57 10.4 0.2 1 23 814 836 814 836 0.98 11 19 0.027 2 8.7 1.1 2 23 924 945 923 945 0.95 12 19 0.41 31 5.0 1.0 3 23 957 977 955 977 0.95 13 19 0.00068 0.053 13.7 0.4 1 23 1054 1076 1054 1076 0.98 14 19 0.027 2.1 8.7 0.3 1 23 1144 1166 1144 1166 0.97 15 19 0.0015 0.12 12.6 0.3 1 23 1172 1194 1172 1194 0.97 16 19 0.00099 0.076 13.2 0.6 1 23 1257 1279 1257 1279 0.97 17 19 0.00042 0.032 14.4 1.2 1 23 1285 1307 1285 1307 0.99 18 19 0.092 7 7.0 0.5 2 23 1409 1430 1408 1430 0.97 19 19 9.4 7.2e+02 0.7 0.4 3 23 1439 1459 1438 1459 0.91
Sequence Information
- Coding Sequence
- ATGACGGGAAGACAGCCGCGAATGCGCGCACTACGTCCGCGATCGAAACAGCAGTTCAAAATTCGGGCAGTCCATACGGCTGAAGATAACCTTAAACGTGAGCGAGCGGAAGCCGAGAGTCAAGAGGAGCTGCAGAACGTATCATTAATGGAAACGGAGGTGATAAAGGATGAACAATTCGGAAATGAAGGCTCAGAGGTTGCAAATAATTCTGTTGCGACACAATCTGCGAATAGCGTTCACAGCTATGAATGTAAAATGTGTAAAACACCCAGAGTGTTTTTATCGCTCAAAACTTATATGGACCATCTAAAGAAGGAACATAAAGCAAAGgGAAAGTTAAATAGAGATATTGGAGGTCGATGTTCCATGTGTACTTATATTGCTTTGAATCCCAATGATCTTGAAACACATCAGAGAGTTCATCATTTAAAAAGGAGATTTTTTAGATGTAATAAATGTGCTTATACCACACATGTTAGGGCACGCTACACAAAACATGTCAAGTATCATTCTATGCCAATGATCAAATGTAGTGCTTGTGATTTTCGAACTCCATATAAGTGGAATTTAGATAGACACACACGTAATCATGGAGGTGGTGGTGTATTTCAATGCCAAGCGTGTGATTTTACTGCAGATATCAGGCAGAGCTTAACAGTACATGAAACTAATCATCATGAACCCCCTATTGGAGATGCATTGAGAAAAGGTTCTGTCCCGTATGAGCGTAAACTGAGAAATATTCCAAAACGTTATAAtcaaGTAGGGGCTAGTGACTTTAGGGAAGTGTCAGCTCTTGCCAGAATAACGACAATATCACTCGATTCTTACATGCAGGAAGCGGAAGGACATTTACTTGAGGATAAAAACACATCTATTGCTGATGCTGAATGCATTGCACTAAAATGTGAAGAAAAAGGTTGTCAATTTGTTACAGCATGGGATTCTGAAATGCAGCAACATCTAACAGAGTGCCATTCTATAACAAACAATGCGAATAAAGCTAAGAAGCCTTTACCTATGTTGATACCTTTAAGCCCAGCTAGCGCCAAGTCGAATAATCCGTCGTCCAATGCGTTACTGAAAGTACCGCGTGTTAGAGTGAGACCCGAATTAGCTCAAATCGCAAGGGATACCGAAATCGCTAAATTATATGGTAGTAAAGAGGCtgtgaattcgaaaaaaataaacactgcGGATACGTTTGAGAAAAAGAACGCTTCGTTCtttgataaattgaaagaaaaattaacaacaacGACGACAATCAATAATGGAATCTCCGAGGTAGCTGTAAGTACTACAAATGATTTAAAGTGTTGGTGTACGTTTAAAGCTAGTAGCATGGAGGAGCTAGCTCTTCATAAGCAAACACACCATACCGCTCTAAGTGTATCCGTGGGTACATCACGTTGTCCGAAATGTAGAAGACGTTGCAAAAGTTCAACCGATCTACAAGTACATATGCAGGTTTGCCACCCGTCATCAAATAAGGATAATCTGTTCGAAAGTAGTACGGAAAATATAACGATTTGTTCAGACCCTAGTTTGGCTTTGCCTTGTGACGAGTATTCTTCGAGTATTTCTCCGACAATGGAATGGGACGGAAATCCCGGAGGCCGCAATCCATCCGGATCGTCGgcCGAAGGCGGAGTCGTCGGACCTGGAAGACGGGTGTTTAAATGTCCGCATTGTCCATTTTGGGCTACTACTGCTAGCCGGTTTCACGTTCATATCGTCGGTCACTTAAATCGCAAACCTTTTGAATGTTCGTTATGTGCCTATCGTTCAAATTGGCGTTGGGACATAACGAAACATATCAAATTGAAAGCAGTGAAGGATCCCGTGCACATGACCGCAAGGGTTCTTATGACGGATGAAACCGGACGCCGTAATTACTCGAAgtacaacaaatatttagcAAAAGTCGATCAAAATTACGCAGGACGATCTGCGGAACGCGAAGAAGATTTGGTCATGAGTGAACCGCTATCGAAGGTACTAATCACGACCAATCTTCAAGCACCAGAATTGACTCCTGCACCAATTTCTTTGTTGAGACCTAGCGAGAGTAGTAGCAATGCGTGCAATTTATCTTTACGACCTCCGCCACCGCTTAAAGCTGCTGTAAGAAGCAAGGGACAGTCGTTGCTCAAGAGCAATTCTCTGTCTTCTGCAGTATCTATTACAAGCACAGCATCACCTTTAATAGCCACAGAAGAACCAAAGAAAAGTTTGTGGAAGTGTAAACGCtgtaattatcgaaattccgatAAAGAAACAGTATTGTCTCATGTCAAGATGCATTACGAATTAGTGGAGAAAAAAGTTCCAGAGAAAAGTCCTCTCCGCTGCGAGCTTTGTCCATTTACGGCATCAAATGCGACATCTTTATCTGCTCATAAAATATTCCATCGACCTAATGTGGAAGCAATTTTCAAGTGTTATCTTTGTCCGTATTACGTCAGTACAAAGGCCGAATTGTTAGAACACGCCAGACTTCATGGCGAGGAACTCGCAGTTGTACATCAGCAGGGTAATGATAATCGAACGACGAGTTCCAATTCTCGTCCCCAAAAGTCTTCGAGTAGCGAAAGtgcTACCGAACAAGCTGAAGCAGATGTTGCATCAAATGACAATATTTCAACAAACAACTCATCGAGTGAGCCAGAAGCTAGATCGCCATTACTTTTAGATACACGCGCATTGCCAGACGCGCCTCTAGTTTGGGTATCACGGCCTGATGGTACTCTTGCCAAAATGCTAAAATGTCGACACTGTCCATATGTTACATCGCGTCGAGCCGAAGTGAGAGATCACGAAACAATGCATATAAGCCCCCCAGGACAAGGAACGTTAATAGCTTGCACAGATTGCAGTTTTACGTGCTCGAATAGAGACGTGATGGATGCTCATACCAGCATGCACGCTGGATCGTTAGGAACTGTACATTGTTTAGTCGACGAAAGTAGACCCGATGTTCAGCAGTTGAACGATTTAATTGCATTACTTGGATTGACTTCGCCTCCAGTTTTAGGTCCAGAGCCCGATTTAAAGGATTCTCGCCTCGTCCATTGTTGCAATAAGTGTCCAGCGAGATTCTTGTGTGAGAAAGAATTAAGAATTCATTTACGTTACCATTCCACGCAACTGACATATTCTTGTGAATGGTGTTCGTATGCTGCTCGGCAATCAGCTCATTTACAAGCTCACCAAAAGGCTCACGCTTCTGAATATCAAGACCGCACCAAATACTTGCTCACGGTATACGGTAGCTCACAGCGCTATCCACCTCCACCAATTGCTTGCGTTGAAGCTAACGAGTCTAATTCTGAGTTGAATAATGTAGCTTGGATTGTTGTAGAATATCAGGGAACCTCTAATAATCtcaacaaaaatcaaaatactcAAGCTGGAAACCACGTATTTACGTGCGCTAAGTGTCCAGCTAGGTACTTTAAATTAGATGCTCTAGAATATCATATGACGTTGCATGGTGcgcaaaataaattcaaatgtacGGAATGTGATTATTCACCAAAAACAGCTCAAAATTTAGTTAAACACCAAGTCGTTCACAAGCGGCACAATGAGACCGGCGAAAATTCACACCGTGCCGTTCAAAGCCAACCTAGTGAAACTAGTGAAAATAATCAGTCACGCGCACCACCTCCTCCCGATCAGCAGCTCGACATACACATGCGAGGTAATCCAAATTTCGTATATCCGAACTCTTTGCGTAATGGTCgtttgaaagagaaaaggtACAAATGCCCAAAATGTCCTTCAGCTTTTGAAAAGCGTGAACAATACAGGGTTCATTTGACCCTGCATGGTGCGAAACAGCGATATCGATGTGAACTTTGTGATTACTCGGTAAAATATTACGCCAATTATGTTCAACATTTGAGGAAGCACCAAGCCAACGCAGAAGCACAGGCTAACCGACGGCAGTACGAAGAGGAATCTACAGCTATTGCGAATGACGCAAAATTAGTAGAGAGTTCATCAGTTCAACGATGTGGCAAAAGCCTTAAATCGTTGACGTACAATTCTTTTCCAATGTCACCCACTAACGCTGCGAGTACGTCTGCGTTGAATAACTCAGCATTAGAGGGTCAAAACGCGAATGTATTAACTTCAAATCAAGACAAAcaaactttaattttaatgcagAGAAAAGGACTTATTGCGTCGACAAATGAAGAAGCTAATTTAATACGTTGTCAGAATTGCCCATTTTCGACGAGTGATAAAGATGTGATGGATGCACACAAGCGTCGACACGGCATAGAAAGAATGATAGCACCGTGCATGCATTGCGATTACATTCCCCGCAAAGACGAAAATCTTAGTGAACACGTCAAGTTACATTTTACAAGGCTATACAAGCCAGAATCTTATTTAATAGTAGAAAAGTTGACtctgaatatgaaaaaaataagtggaaacaaaaatgaaaataaagatggAGAGACAACTTTGCTATTTAAAGAGTGTCCTGATGGTCGGTTTCTGCCACAAACAGATTCTAATTCTTCTTCAGTTGTTCCAAACAGTATGGAGActtccgaagaaaaattaattgtggATCCGCATACAGGAGAAACAAAAGATCgttttacttaa
- Protein Sequence
- MTGRQPRMRALRPRSKQQFKIRAVHTAEDNLKRERAEAESQEELQNVSLMETEVIKDEQFGNEGSEVANNSVATQSANSVHSYECKMCKTPRVFLSLKTYMDHLKKEHKAKGKLNRDIGGRCSMCTYIALNPNDLETHQRVHHLKRRFFRCNKCAYTTHVRARYTKHVKYHSMPMIKCSACDFRTPYKWNLDRHTRNHGGGGVFQCQACDFTADIRQSLTVHETNHHEPPIGDALRKGSVPYERKLRNIPKRYNQVGASDFREVSALARITTISLDSYMQEAEGHLLEDKNTSIADAECIALKCEEKGCQFVTAWDSEMQQHLTECHSITNNANKAKKPLPMLIPLSPASAKSNNPSSNALLKVPRVRVRPELAQIARDTEIAKLYGSKEAVNSKKINTADTFEKKNASFFDKLKEKLTTTTTINNGISEVAVSTTNDLKCWCTFKASSMEELALHKQTHHTALSVSVGTSRCPKCRRRCKSSTDLQVHMQVCHPSSNKDNLFESSTENITICSDPSLALPCDEYSSSISPTMEWDGNPGGRNPSGSSAEGGVVGPGRRVFKCPHCPFWATTASRFHVHIVGHLNRKPFECSLCAYRSNWRWDITKHIKLKAVKDPVHMTARVLMTDETGRRNYSKYNKYLAKVDQNYAGRSAEREEDLVMSEPLSKVLITTNLQAPELTPAPISLLRPSESSSNACNLSLRPPPPLKAAVRSKGQSLLKSNSLSSAVSITSTASPLIATEEPKKSLWKCKRCNYRNSDKETVLSHVKMHYELVEKKVPEKSPLRCELCPFTASNATSLSAHKIFHRPNVEAIFKCYLCPYYVSTKAELLEHARLHGEELAVVHQQGNDNRTTSSNSRPQKSSSSESATEQAEADVASNDNISTNNSSSEPEARSPLLLDTRALPDAPLVWVSRPDGTLAKMLKCRHCPYVTSRRAEVRDHETMHISPPGQGTLIACTDCSFTCSNRDVMDAHTSMHAGSLGTVHCLVDESRPDVQQLNDLIALLGLTSPPVLGPEPDLKDSRLVHCCNKCPARFLCEKELRIHLRYHSTQLTYSCEWCSYAARQSAHLQAHQKAHASEYQDRTKYLLTVYGSSQRYPPPPIACVEANESNSELNNVAWIVVEYQGTSNNLNKNQNTQAGNHVFTCAKCPARYFKLDALEYHMTLHGAQNKFKCTECDYSPKTAQNLVKHQVVHKRHNETGENSHRAVQSQPSETSENNQSRAPPPPDQQLDIHMRGNPNFVYPNSLRNGRLKEKRYKCPKCPSAFEKREQYRVHLTLHGAKQRYRCELCDYSVKYYANYVQHLRKHQANAEAQANRRQYEEESTAIANDAKLVESSSVQRCGKSLKSLTYNSFPMSPTNAASTSALNNSALEGQNANVLTSNQDKQTLILMQRKGLIASTNEEANLIRCQNCPFSTSDKDVMDAHKRRHGIERMIAPCMHCDYIPRKDENLSEHVKLHFTRLYKPESYLIVEKLTLNMKKISGNKNENKDGETTLLFKECPDGRFLPQTDSNSSSVVPNSMETSEEKLIVDPHTGETKDRFT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -