Gleg013931.1
Basic Information
- Insect
- Goniozus legneri
- Gene Symbol
- ZFX
- Assembly
- GCA_003055095.1
- Location
- NCVS01000325.1:66405-70697[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.4 1e+02 3.3 0.1 3 23 33 53 32 53 0.94 2 15 0.096 7.3 6.9 3.7 1 23 918 941 918 941 0.95 3 15 0.00022 0.017 15.2 0.7 2 23 1023 1045 1022 1045 0.96 4 15 0.0017 0.13 12.4 0.1 2 23 1058 1079 1057 1079 0.97 5 15 1.5e-05 0.0011 18.9 2.3 2 23 1082 1103 1081 1103 0.97 6 15 0.01 0.79 10.0 0.3 1 23 1109 1131 1109 1131 0.95 7 15 2e-05 0.0016 18.5 4.5 2 23 1138 1159 1137 1160 0.95 8 15 0.09 6.9 7.0 3.7 5 23 1173 1191 1172 1191 0.97 9 15 1.8e-05 0.0014 18.6 1.5 3 23 1198 1219 1197 1219 0.97 10 15 0.0083 0.64 10.3 0.3 2 23 1235 1255 1234 1255 0.97 11 15 5.5e-05 0.0042 17.1 0.7 1 20 1261 1280 1261 1283 0.92 12 15 2.6e-05 0.002 18.1 2.8 1 23 1291 1313 1291 1313 0.99 13 15 0.0019 0.15 12.3 3.2 1 23 1319 1341 1319 1341 0.97 14 15 3.5e-06 0.00027 20.9 3.9 1 23 1347 1369 1347 1369 0.99 15 15 0.0012 0.092 12.9 6.3 1 23 1375 1397 1375 1398 0.96
Sequence Information
- Coding Sequence
- ATGGATGCAAACAGTAGTGGTGTAAATGCTAACGGCGCACCAGGTGGAGGTACTTCTGGTGGCGGTGTCGCCGGAAGTACCGGGGGTGCCGTCGCTTGTCCCGTCTGTACTCTTTATCTCCGTGAGGGTATCAGTTTGCAAAAACACTTGGATACCCATCCAAAAGAACAGGTTATTGAAGCACTGATCAAAGCCAGTGGGTCAACTGGGTCGTCATCGGCGTCTTCCCCGACGATCAATCAACCAGGTCTTGTTATACCACCTGGACAGGTTACTCAACCACTTCTTCAACAACAGCAAAATACATCACCAGCTTCATTGCCGTCGTCATCCTTGGTGGCGCAAAATCCTCATATCTCCGCCCAGTCTTCATATCCTATTGGACCGGTATTCGAATGTCCACCAATAGGTACCATGATGCCTCCTCAATTTGCCTCTTTTAGCTATCAACAATTTGTCAATAATGGCACAATGATGATACCACAGTATGCTATGGCTTCACCGCAAGCTAATCAAATGATGCAAATGTTATACAATCCCTATGGAATGTATCAGCAACAGCAAGTACCTACTGTACAGATGTTATCACCTTTAGCGGCTATTCCAAATGTTACAAGGCACCGACCTATTTTACCTGCTGTTACAAGggccaatgaaaatattactaGAAATACAATCACTGTGTCTGTTGATAGTTCAGAACCAAAACAAATATTACCAGAAATATTATCAGATACAGAGGCTGAAACAGAACATGTTTTACCAGATATTGAATTGCCCACAACTCCAGTTccattaaatgaaaataactctATAAGACAAAATGAAAGTGAAAACAACGAAATGCATTTGGAACATAAAGAACAACAGACTCAAAATGATACCATACATGAGCAAAATGAATATGATAATGGTAATCAAACTGTCACAATAACTCGTAATATTTCTTgtgatgaaaaagaagaatctgTATTACCAGATATAGAAGATACAGAACCTCAAAGTGAATCTCAGGTTATTGAAACTGACATGCAATATAAATCTGCGCAATATGAACAGTCTGAGACAGAGCAGCTTGTAGAGAAATATACAGAAGAGAATAGTGGGAACAAGAGTGAGGTAACAACTGTAGAACCAACAAAAGAAGTTGACAATGGATTTGACACTTCTACCGAAAGCATAATTGCAGAGAAAGAAGTTATTGTAGAAGAGTCTACGGTGACTTTAGTGCCAAGTTCATCTATGGAGGAGAATCAGAAAACTAATTGTCCAGCTGTAGAGCAGTTAGAACGTTTGTTAATTACCATAATATCATCCGAAGAGAGTAATTCAACAGAAAATGCAAGTGATACTTCTAGAGGtagagtagaaaataaaaggaaaagtgattcaaaaaatagagaagacAGTGTTACCTATGATACACTTTCACCTAGTACCTCTTCTAAAGAGAATGGAGAATCTAGTGAAATGGATATAGATCGCATAAATGTATCAGAAGAATATGTAGACAATTCTGATATTTATTGCAGTAATATGTATCGTTACAAACACAGTTTATCTACTCCAACTTCTCCAGTAGCACATAATAAATCTTTTCGTACATACTCTGTTCGTTCCGAATTTGGATCAACTGAGGACTGTAGTATGTATCCTGTGGGATTTGAAGCTGCAATTTTACATGGTGATGAAGAAACTGaagttgataataaaaatgaagaagataATTTCGACGAAGCTGATATggaaatagaagaaattcATAGTCCACATACACCTTTTATGAAGTATAGTGAAGGTACAGAGAATATCAGATCCCATACACCACTATCTGCTATAAGTGGTATTTCTGGTTTAAGAGTTAGGAAAGATCTTGGAAGTAAGCCAAACTCTCCTGTATCTATGCACTCTTTCTGTCACATGGATTCTGATAGTAGCAGTCAAGAAGATGACAGCAATGAGGAAACTGGTGAAATGGAGAAGGATTCAATAAACTCTTCTCCTGTAGAATCTACTTTAAAAGCTAATCAACCTAATACAGCTGTATGCGAAAACATAGATAGAAAATTGGAAACAAATCATGCATATCATCAGTCTGTCATAACTGAACATATTAGTTCATTCCCAGTTACTCATTCTCAGCAACCTATTATAGTACACGATAAGTATTCATCGCAAAGTAAAAATCATAGTCTTTTGAATCTAACAGAGTCAATTGTATCGAGTAGCAGTTCAGAACCTAAAAATTACCATTCTAATAAATCTATAGTACAGAAACAATCAACGGAGTTGCTTAATATCAATGAAGATGCTCATGCTGGACCTATAAATGTCTTTGAGTTTGATGGACTTCAAATTTTAGTTCCTAGTACTTTTATAAGTGAGTCCTCTCAAAAAGCAGTTAGTGCTACTAGTCAACAGTCAATGGCAAGTAGTGAAGGAGGAACTGGTATGGATGAAGAAGTGAAAAGTATCAATATGAGAGCAGATGAGACTATGCCCCCCAGAGGAGAATTATCAGAGCAGGAGAGTAATGGCTGTACTGAACAATCAGCTTGGCAGtaCTATATGGGTCAAGAATCATCGCGTATGTCTACATCGTACGATCTTATGGCACGAGAAAGCTGGGAAGAATCTGAGGGATCTGATAACGAAATTGGTGGACCACTACTAGATAGCAGATCTATGGCCACTCATTTTACTTCAAGTTTATTCTTAGATCGCGATAGGAAAACACCGACCAAAAGGACTTATAAGTGTTCACACTGTAACGAAGTATTTGATTGTCCGAAAGAACGGCGTGTGCATATCACAACAATGCACAAAGAAGCTGAACCTAGTAGTAGCAGGGACCCCATGGAAACATCAGAAGTGaaagatattaaattattagacGGTCGAATGAACGTGTTTGATGATATTTTTGTGCCCGGACTTCATGTTCAACAGGTTTATCATCAGCAACCACTTTTACATCAACTACAACCGCCACAATCATCTGATTTATCTAAAGCAGAGTCTGACCAAAAAATAGACAATGGTACAATTCCACAAAATATGGAAGTAACATGCGCGATATGTGGTCAAAGATTCGGCAGTGAAAAATCTCTTCAGATTCATCATCGAAGAATACATGCAGCGGAAATCTCCAAACGTGTTCGTGAAAGTACCAAGTGTCAGATTTGTAACGAAGAGTTTCCGTCGGTTGTTTTGTTTAATGCTCACTTAAAGATTCATCCTTTGGAATGTGGACAATGTGGCAAATACTTTTATCGGAAGCAAAATTTCAAACTACACATGAAACGGCATTTAGGCATAAAACCCTTTCCATGTACCGTTTGCGATAAAGCATTTCTCACTAAACAGAAGCTGGATGAACATACAAATGGACACACTGGTAATGCTCCAgttaaatgtaatttatgtAACGAAACGTTCCGTAGGTATTCCAATTTGACACAGCATAAGAATAGACATCACCTCAAtattaagagaaaattaaaagattataTATGCCACTGCGGTGAAGTATTTCatactaagaaaaaattagcatGGCATAAAGAAACACACGACGAAAAGCCGAAAGCATGCACTTATTGCAATGAGAGATTTATACACATGGCCAGTTTAACTCGTCACATGCGTCGTGCTCACAATAGAAGGTTCGTTCCTGATGCtcaaagagaaaacgaaaacgtgGAGTGTCCCATttgtaaatgtatttatttacgatCTTCGTTAGCCGTACATATGCGTGTTCATAATGGGGAAAGACCGTACGAATGTCAAGTTTGTTCCAAAGCTTTCAGTACCAAGTGGAATTTACAATTGCACAAATGGACTCACGCGGCACGAAGCACAAAACCTTTCAAGTGCAATCAATGTAATGCTGCATTCTATCGACACAGTGATTATACGGCTCATATGAATTCTCATCGCAATGTTCGTCCTTATACGTGTAATTATTGTGGAGCACAATTCATAAGGAAGTATAATTGCTTAAGACACGTGAAGGaacacgaagaaaataaagctTACACGTGTGACGTTTGTAATAAAACTTTCCACAGATCATATTATCTTAAAGAACATTTGAGAGTACATTCGGGCGCGCGACCATATACGTGTCATATCTGTGGCAAATCTAGCGGCACCAAGTCAAATCATAACAAGCATGTTCGTATTCATCATGCAAGAGAACCCGTTAATacggaaaattaa
- Protein Sequence
- MDANSSGVNANGAPGGGTSGGGVAGSTGGAVACPVCTLYLREGISLQKHLDTHPKEQVIEALIKASGSTGSSSASSPTINQPGLVIPPGQVTQPLLQQQQNTSPASLPSSSLVAQNPHISAQSSYPIGPVFECPPIGTMMPPQFASFSYQQFVNNGTMMIPQYAMASPQANQMMQMLYNPYGMYQQQQVPTVQMLSPLAAIPNVTRHRPILPAVTRANENITRNTITVSVDSSEPKQILPEILSDTEAETEHVLPDIELPTTPVPLNENNSIRQNESENNEMHLEHKEQQTQNDTIHEQNEYDNGNQTVTITRNISCDEKEESVLPDIEDTEPQSESQVIETDMQYKSAQYEQSETEQLVEKYTEENSGNKSEVTTVEPTKEVDNGFDTSTESIIAEKEVIVEESTVTLVPSSSMEENQKTNCPAVEQLERLLITIISSEESNSTENASDTSRGRVENKRKSDSKNREDSVTYDTLSPSTSSKENGESSEMDIDRINVSEEYVDNSDIYCSNMYRYKHSLSTPTSPVAHNKSFRTYSVRSEFGSTEDCSMYPVGFEAAILHGDEETEVDNKNEEDNFDEADMEIEEIHSPHTPFMKYSEGTENIRSHTPLSAISGISGLRVRKDLGSKPNSPVSMHSFCHMDSDSSSQEDDSNEETGEMEKDSINSSPVESTLKANQPNTAVCENIDRKLETNHAYHQSVITEHISSFPVTHSQQPIIVHDKYSSQSKNHSLLNLTESIVSSSSSEPKNYHSNKSIVQKQSTELLNINEDAHAGPINVFEFDGLQILVPSTFISESSQKAVSATSQQSMASSEGGTGMDEEVKSINMRADETMPPRGELSEQESNGCTEQSAWQYYMGQESSRMSTSYDLMARESWEESEGSDNEIGGPLLDSRSMATHFTSSLFLDRDRKTPTKRTYKCSHCNEVFDCPKERRVHITTMHKEAEPSSSRDPMETSEVKDIKLLDGRMNVFDDIFVPGLHVQQVYHQQPLLHQLQPPQSSDLSKAESDQKIDNGTIPQNMEVTCAICGQRFGSEKSLQIHHRRIHAAEISKRVRESTKCQICNEEFPSVVLFNAHLKIHPLECGQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKRKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRENENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCNAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSGTKSNHNKHVRIHHAREPVNTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -