Basic Information

Gene Symbol
-
Assembly
GCA_003055095.1
Location
NCVS01000276.1:530847-533421[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.6 3.8e+03 -2.2 0.0 2 12 364 374 363 375 0.88
2 3 0.0096 6.5 6.6 0.0 25 45 418 438 410 439 0.93
3 3 4.5e-06 0.003 17.3 0.0 3 45 447 495 446 496 0.92

Sequence Information

Coding Sequence
atGAAAGCTAAAGAGGAAGTAAGCAGTGTTAACCATGAGGCAGATCAGTGTTCTCCAACGGAAGTTACTGTTAAATCCGAGgtaaataaatcaaacaatataaaatacgataaaaatcaaCTATGTAAAAGTAGTGAAATCaaaaacgaaaaggaaaaagacgagaaacatttaaaaaatacagaagTACAAACCGAAATCACGTCGTTTAATGATGACATTTTATTTAGtgtgaacgaaatttttaaaagagagaaattttctccaATTAACGCAGAAAATATACTCAAGTTCATATATTGTCGAAATTCTTtattcgatcaaaatttaatgaacaacaatgaaattatttctaaaattccTGACGATAAAACTTTATGTTACGGTTGTTGTAGTATTCTGGAAAATTCTTCACTACCAaacttattaattaatgaaacaaatatcaaattagATTACAATCTTTGTGATTTTTCTGATCTGGATGTTAAACAAGAGCCATACATGGTGGATACATTTGATAATTTTGAGGCGATTGAAATGTTGcacgatatcgataatttaattaaattcgaagatGAAACATCTTCTAATACTATATCTTCTCTAATGCTCAATCTTGATATACAGGAAAATAACCAGCGTGTTACAAGTGAAAGTAATGGTATTGACACAGATCCATTACATATTGATAATCATATGAAAAAAGACCCTGCTttagaaaatatcgaaagctctgtgaaaaatgaaaatgaaaggaAATTTAAAAGATCTGGGTCGAATGATGATAAAtccagaagaaaatttattaaaaaggaaaacaaatcgAGTAGtgaagaaaatttggaaaattcaagAGATAGTTTCAATGAAACAATCTTAACAAATGAAGAAAGTGAAATACAGGAGGAAATAGAATCAGCATTACAGAAACATGAGTTGTCTAAATCTGATATCGAACGATTGAGGAAATTAGAAATACGTCTTATTCATGATCCTCCTCCACAAcacaatatcaatttttcgggTGGAATATTGAAGTCATCGATACTACcaaataatatgaaaagttTCGGCCCAATGCGAAATGGACCATATACTACTGCTGAAGATGAGATCATTACTACCAATTGGATACTATTTTGTAAGgttcATCATtgggaaacaaaaaatgtcCAGCCTTTCTTAACTTTAAGATTACGTAATAAAgcatatttattaaaaagagaggaaagaaagaaatttctccAATTTATAGCTGATGGATTACCATGGCGGACATTGTCTAGTGTTTATTATAGATTTAGAAATCTATATTCTAAACATCAAGTGTATAAAAGGTACACTCCAGAAgaagatagaaaaataatgcTATACATGCAAAATATCTCAGTAGAGTCCTCCAAAGGAcatcataaattttctgaattggCTAAATTGTTTAATAGAACAAGATATTCAGTTATGCGTAGAtaccaaaaattaatttcagacACCAATTTAGATGATAAACcaTTAACAAAGGTTAACTGGAACTTGAAACTGTTAACTCAATACATAGAATACTTACTTGAATTAACTATGAGCAAAGATATAcgggaattaaaaaatgctATTATTCCAAAAGTTGTCTGGGAGGAGATGGAAGAAAGAATGGATATTGATGGGAATGTGTTGAAAAATCTTTGGAATTTACAATTACACATGCAATTATTTTGCGCAGaaccaatttatttaaatgatgtaaaaattataataattgaatatCTTTATGTGAAAGGGATATCACATATGAAGGAAATTTCTTGGTCTAATCTTGCTAAACAGTATGATGGAATGACTTCAATGTTTCTTTGCAATACTTTCCATTGTATGCTTAAAACTTGCCCAATCCAATCACACAATGGTGAAATTTTAGaaattattgaatatatctATAATCACAAACTTGAACAACTGAAGAATGAAAGGACTGATAAGTTTTTGCCACGATTGGTGtatcataataaaaaattagaggaagaaaaacgacCATAA
Protein Sequence
MKAKEEVSSVNHEADQCSPTEVTVKSEVNKSNNIKYDKNQLCKSSEIKNEKEKDEKHLKNTEVQTEITSFNDDILFSVNEIFKREKFSPINAENILKFIYCRNSLFDQNLMNNNEIISKIPDDKTLCYGCCSILENSSLPNLLINETNIKLDYNLCDFSDLDVKQEPYMVDTFDNFEAIEMLHDIDNLIKFEDETSSNTISSLMLNLDIQENNQRVTSESNGIDTDPLHIDNHMKKDPALENIESSVKNENERKFKRSGSNDDKSRRKFIKKENKSSSEENLENSRDSFNETILTNEESEIQEEIESALQKHELSKSDIERLRKLEIRLIHDPPPQHNINFSGGILKSSILPNNMKSFGPMRNGPYTTAEDEIITTNWILFCKVHHWETKNVQPFLTLRLRNKAYLLKREERKKFLQFIADGLPWRTLSSVYYRFRNLYSKHQVYKRYTPEEDRKIMLYMQNISVESSKGHHKFSELAKLFNRTRYSVMRRYQKLISDTNLDDKPLTKVNWNLKLLTQYIEYLLELTMSKDIRELKNAIIPKVVWEEMEERMDIDGNVLKNLWNLQLHMQLFCAEPIYLNDVKIIIIEYLYVKGISHMKEISWSNLAKQYDGMTSMFLCNTFHCMLKTCPIQSHNGEILEIIEYIYNHKLEQLKNERTDKFLPRLVYHNKKLEEEKRP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-