Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_003055095.1
Location
NCVS01000527.1:263826-265666[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.5e-08 1e-05 25.2 0.0 2 38 295 334 294 338 0.86
2 2 9.5e-09 6.4e-06 25.9 0.1 3 45 376 423 374 424 0.89

Sequence Information

Coding Sequence
ATGAGGACTGCATTACTGGTTATTggtattttacaatttctcgCATTGTGTGAATTTTCACATGCGTGGGATAATGAAGAATTAGAAGTATTTGACGTTGTAGAAGAAGTTAATCAAAACTTTTATGAAGTTCTTGGTGTATCAcaggaTGCAAATGCctcagaaattaaaaaagcgTTTAGGAAATTATCTCTGCAGCTACATCCAGATAAAAATTCTGCAGAAGATGCTGAACAACAGTTCGTAAAATTAGTTGCTGTTTATGATATATTAAAAGACCCTGGAAAACGTCAAAAGTACGACAATGTTCTTGTCAATGGATTACCAAATTGGCGATCAGCTGTATATTATTACCGCCATGTCAGAAAAATGGGACTCTTGGAAATGACTAGTATTTTGTTCATAGTTATAACAATTGGACAATATTTGGTGGGATGGGCAGCCTATTTTGAGAAACGATATACCtatGAACAAGTTCTTGGGAGTAAACTTCAGAAACTTCAAAAGCGTAATAGAAAGGGTAAAATGGATGTACCAGATCTAGCAactattttagaaaaaataccTACACCAAGTGTTTGGAATACACTTCCATTTCAACTGCCTCAATGGATAATCGCATTCATATTTGGTGTACCATCCACTATTCGAACAATCAGTTTAATTttagaagaaaagaaacgtaaaaaaaaactagaggAAGAAGAAGCGCTAGCTCAAGAAATTGAAGAACCAGAACCAGAACCTGTACCCCGTGGTCCAAGAAGGAGACGAGCTGCTTTCATGCCACAAGAAAAGAGCAGTAATAATAATGTGAGAGAAACATCTAAGAAGGATGATAGTGAAACAAATCACATTTATGAAAAGCCTGCAGTGTCAGGTGGTTTATGGACTGATGATGATATTTTagaattaatcaaattagtGAAGAAGTACCCAGGAGGTACATCAGACAGGTGGGAAAAAATAGCAGAAGCTATGAACAGAACTGTAGGAGAAGTTACGCACATGGCaaaaaaaaTTAAAGACGAAGGATTAAAACCGGGTCAAACCGCGGATGATGCAGTCGTAGAAGAGCGTCctaaaaaagtgaaaactcgaatagaaaatacagaaaataattctgaatGGAGTCAAGATCAACAAAGGGCATTAGAAGCAGCTCTCATAAAATATCCAAAAGGAATGTCAATTGATagatgggaaaaaattgcatctAGTGTTGATGGAAAAACTAAGGAAGAGTGCCAAATGAGATATCGACAGTTAGTTGaaattgtaaagaaaaaaaatcagtcacaagaagagaaataa
Protein Sequence
MRTALLVIGILQFLALCEFSHAWDNEELEVFDVVEEVNQNFYEVLGVSQDANASEIKKAFRKLSLQLHPDKNSAEDAEQQFVKLVAVYDILKDPGKRQKYDNVLVNGLPNWRSAVYYYRHVRKMGLLEMTSILFIVITIGQYLVGWAAYFEKRYTYEQVLGSKLQKLQKRNRKGKMDVPDLATILEKIPTPSVWNTLPFQLPQWIIAFIFGVPSTIRTISLILEEKKRKKKLEEEEALAQEIEEPEPEPVPRGPRRRRAAFMPQEKSSNNNVRETSKKDDSETNHIYEKPAVSGGLWTDDDILELIKLVKKYPGGTSDRWEKIAEAMNRTVGEVTHMAKKIKDEGLKPGQTADDAVVEERPKKVKTRIENTENNSEWSQDQQRALEAALIKYPKGMSIDRWEKIASSVDGKTKEECQMRYRQLVEIVKKKNQSQEEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-