Basic Information

Gene Symbol
dnajc2
Assembly
GCA_003055095.1
Location
NCVS01001613.1:92596-95217[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.3e-05 0.056 13.2 0.0 3 31 444 476 442 494 0.84
2 2 2.4e-13 1.6e-10 40.6 0.0 2 44 572 618 571 620 0.92

Sequence Information

Coding Sequence
atgaccGATGGAACATCAAATGATGTTTCCAGCAGCTTAAATACTGTAACAGaAATTTACAAAGGAGGAACTAGTATGGCTGGCCCATTAGTTTTGTACTCAGAAGCGCAAGCATGGACTGCATATTTTTATCGTAGCGTGTACGGTTTACCTCACCATTATGAATCTGAATCATCCGATGAAGAAGATACCTCCAACTATCAATTTGAAGATGACCTTGACTACCTGAGATCGCTGGATCCAAAAGAATGGAAGGATCAGGACCACTACGCTGTTTTAGGATTGAAAAATCTAAGGCACAAATCATCggaagatttaattaaaagggCTTacaaattaaaaattttaaaacaccATCCTGATAAACGAAAAGCCTTGGGAGAGGAGATCCGACCCGACGATGACTACTTCACATGCATTACTCGAGCTTGGGAAACTCTAGGAAACCCAATCAAAAGAAGAAGTTACGACAGCGTAGATCCATATTTCAATGACGACTTACCAGAGGAAAAAgaatgtaaacaaaatttttataaggTAATGGGTAAAGCATTCAAAGACAATGCAAGGTGGTCTGTAAAACAACCAGTTCCTAAATTGGGTGGACCCAATATGGCAAGAAacaaagtagaaaaattttactcattttGGTATGAATTTGACTCCTGGcgtgaatattcatatttggACGAGGAAGATAAAGAAAGTGGTCAAGACCGTGATATGCGAAAAtggatcgagaaaaaaaataaagccaCAAGAGCTAAacggaaaaaggaagaaatgaCCAGAATACGCACATTGGTTGACATGGCTTATAACGCAGAtcctcgaataaaaaaattccaacagGATGACAAAGACAAAAAAACAGCAGTTAAGAGAGCGAAACAAGAAGCAGCGAGAGCAAGGCAgcaagaagaggagagaaaggcTAGGGAATCGGCGGAAAAAGAAAGgctagaaagagaaaaacgtgagagcgaggaaaaaataagaatggaTGCGCTTAAGCAAGAAAGAGATGCGCAGAAGAAAGCTCtgcgaaaggagagaaaagcaTTCAGAGACTACTGTAAAGCTAACAGTTATTTTGCAGAAAACCCTGATGAGAATATTCGCCATAtggaaaatgtagaaaaaatttgcgagTTATTTAAATTAGTCGAATTAGAGAGTGCCACTAAAAGGATACAAGAAGACGGACGAGAAGGATTTCTTAGTATTGTGAATGAAACTGAGCAAAAACTGAACGCAGAACGTCACGGCCCTCGCATGTCTATCGATCCGCGTAACGCAGTGGAGAAACAAGTAAAAAGTAGCTCAGCTCCATGGAGCGAGAATGACCTCCAGCTTTTGATTAAAGCGGTAAATTTATTCCCCGCTGGTACAGTCCAGCGTTGGGAAGTAATAgcgaatttcataaatcaacATGGAAGCTCATCTCGTGGAGTAACCAGAGAACCCAAAGAAATCCTCGCTAAGGCTAAAGATTTACAGTCATCGGACTACAGTAAATCGAGTTTGAAGGAGCAGGCGAATAAGAAAgctttcgataatttcataTCCGAGAAGAAAGCGAAGAATGTTGACGAAAGAATGCCCGCTGTAACCGAACGTTTGGATCCCCCAGTATCCAATGGCGTATCGAAGTCTGAAAACAAAGAGCCGAAGAAGGAATCACAACCGCAGCCACAAGCACAGCCACAGTCGCAACCATGGACACCCaccgaacaaaaattattagaacAGGCATTGAAAACTTATCCAGCAAGTGCAAGCGACAGATGGGATCAAATAGCTAGCTGTATACCGTCTAGATCAAAGAAAGAATGCATGAGGAGGTATAAGgaGCTGGTGGAACTTGTCAAAGCGAAGAAAGCAGCGCAAGTTATGAAATAA
Protein Sequence
MTDGTSNDVSSSLNTVTEIYKGGTSMAGPLVLYSEAQAWTAYFYRSVYGLPHHYESESSDEEDTSNYQFEDDLDYLRSLDPKEWKDQDHYAVLGLKNLRHKSSEDLIKRAYKLKILKHHPDKRKALGEEIRPDDDYFTCITRAWETLGNPIKRRSYDSVDPYFNDDLPEEKECKQNFYKVMGKAFKDNARWSVKQPVPKLGGPNMARNKVEKFYSFWYEFDSWREYSYLDEEDKESGQDRDMRKWIEKKNKATRAKRKKEEMTRIRTLVDMAYNADPRIKKFQQDDKDKKTAVKRAKQEAARARQQEEERKARESAEKERLEREKRESEEKIRMDALKQERDAQKKALRKERKAFRDYCKANSYFAENPDENIRHMENVEKICELFKLVELESATKRIQEDGREGFLSIVNETEQKLNAERHGPRMSIDPRNAVEKQVKSSSAPWSENDLQLLIKAVNLFPAGTVQRWEVIANFINQHGSSSRGVTREPKEILAKAKDLQSSDYSKSSLKEQANKKAFDNFISEKKAKNVDERMPAVTERLDPPVSNGVSKSENKEPKKESQPQPQAQPQSQPWTPTEQKLLEQALKTYPASASDRWDQIASCIPSRSKKECMRRYKELVELVKAKKAAQVMK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-