Gleg006742.1
Basic Information
- Insect
- Goniozus legneri
- Gene Symbol
- lola
- Assembly
- GCA_003055095.1
- Location
- NCVS01000496.1:110524-113080[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.2 5.8e+03 -3.2 0.1 4 20 102 118 101 119 0.73 2 2 7.8e-09 5.5e-06 25.7 0.1 9 40 396 428 395 433 0.87
Sequence Information
- Coding Sequence
- ATGGAAAGCAACCAGCATTACTGCCTAAGGTGGAACAACCACCAAACAACACTTATCCAAAATTTCGACACACTTCTGGAAAGCGGTACGCTGGTCGATTGCACGCTGGCGGCGGAGGGCAAGTACCTCAAGGCGCATAAAGTTGTATTATCCGCATGCAGCCCCTATTTTGAGGGTCTCCTCAGCGAACACTATGATAAGCATCCTGTCTTCATATTAAAAGATGTTAAGTTTGATGAATTAAAAGCCATGATGGACTACATGTACAGAGGGGAAGTTAATATTTCCCAAGACCAATTGGCAGCACTTCTCAAAGCCGCCGAGTCCTTGCAAATTAAAGGACTTTCCGAAAGTAAAACAAATGAGAGCAGTAATAAAACGGACACAAGGCAACAAAAAATCACACAACCAACGGCACCGTCGTTAGACATTCCACACGTGTCTTCCGGATTAACCATAGAAAGAAATAACATCAAAGTTCCTAAACAGAATTTGGTGGTAGGGTCTATAAGTGATATACCTGAAGATTCGGCCAGTCCACAAATACCAATATCTAAAGGATTATCGTCCAGgGAAGGGTCACAAAGTCCAACatcaagaaaaagaaagaggtaTAGGAGAAGAAGCGCCGGGGAGGATACCTCTATGGAGAATCACGAAGCATCAAATTCGAGTGACGTATCCCAGCAAGTTGGTATTCCGGCGCTTGGTATTGCTCCGTTAGGTGAAGACAAAGCAGTTTCAGACATTTCGGAAAGCGCCAGATCGTCACTCGTGACGCAACTGGCGAAACCGACAGACGATATGTTACAGATGCCGCTAGAAAAACCTGAGCCTAACGACAGTCTAATTGAGCCAAAGTCTGAATACCTGGACGATCCCGAAGAAGGGGTAGAAGACCTTACACTGGATGAAGATATGAACGATTTAAATGAAGTGGAACAAGATAATAATAGAGCTGGACCTTCACACGACCCGTCACAACATCCTGGTGGGGGGGCGGGAGCGCGGTCTCGGTCGAGAGGTAATTCGGGTGGTGGTGCCCCCTGGGCGTCCCATTTCCTCGATTGTAAAAAAGATCCGCACACAAGGTGGCCACGCCCTGACGTTGACGTAGGCGCGTTGCTTAAATCGCTGGCGAACAAACAGGGCAGGAAATATAGTTTAGACTCGGTTAAAATGTCTCTGGAAGCGATATTGCAGCAAGGTGTTAGCACCACTCAGGCATCCGAGATGTATGGAATTAATCGTTCAACGCTGCaattctatttgaaaaaattgaacgtcgTTCGAAGGAGATGGAGACAACAACCTAGTACTTTAATTCAACCCAGGCAATCCTAA
- Protein Sequence
- MESNQHYCLRWNNHQTTLIQNFDTLLESGTLVDCTLAAEGKYLKAHKVVLSACSPYFEGLLSEHYDKHPVFILKDVKFDELKAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSESKTNESSNKTDTRQQKITQPTAPSLDIPHVSSGLTIERNNIKVPKQNLVVGSISDIPEDSASPQIPISKGLSSREGSQSPTSRKRKRYRRRSAGEDTSMENHEASNSSDVSQQVGIPALGIAPLGEDKAVSDISESARSSLVTQLAKPTDDMLQMPLEKPEPNDSLIEPKSEYLDDPEEGVEDLTLDEDMNDLNEVEQDNNRAGPSHDPSQHPGGGAGARSRSRGNSGGGAPWASHFLDCKKDPHTRWPRPDVDVGALLKSLANKQGRKYSLDSVKMSLEAILQQGVSTTQASEMYGINRSTLQFYLKKLNVVRRRWRQQPSTLIQPRQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01418424;
- 90% Identity
- iTF_00756753;
- 80% Identity
- iTF_00756753;