Gleg010067.1
Basic Information
- Insect
- Goniozus legneri
- Gene Symbol
- -
- Assembly
- GCA_003055095.1
- Location
- NCVS01000285.1:2219-3643[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7e-09 4.9e-06 25.8 0.0 4 38 60 93 59 97 0.93
Sequence Information
- Coding Sequence
- ATGgcagtggaaaataaaaagaaaaatcaacgcAAAGATAGAAATACAAAGAAAGCAAAGAAAAGTAAGCCGCGAAATTTAcataaacacaaaaatgaagtatttgtcaaaaaatcaaataaaaaagtgcagaaaaataaggaaaataaagaaaaaaggaagcaaTATCCTATTAAAGATATCGAACAAGCCGTTAATGCAGTAAAAAAAGGTGCATCGTATAGAGAAGCCGCAAAGAAATTTGGTGTTCCAACAACATCCATTCACAGGGCAATACGGCatcctgaaaaaattaattcaagcCATGGTCCGGCTCCAATATTGTCGAAAGAAGTAGAAGACGAAATTCTTTATTGGATATTGTATcgagcagctagagggttccCAGTTACTAAAACTGAATTGTTAGATAGCGTTCAAACTTATGTGCAAAAACTCAAGATGCAGACTCCTTTCACTGACGATAGACCAGGGCGTCActggtatgaaaattttagacaCCGTCATCCACAAATTGCACTCAGGACACCACAGCATTTAACTGCTATTCGTGCTCAAGTCACTGAAGAAGATCTAAGAGGGTGGTTCACAGAAGTGCgtgaatatttaacgaaaaataatttgcttACAATTCATCCGTCAAGAGTATTCAACTGCGATGAAACAAATATGCAACTAATTCCAAAATCTGAGAAAATATTCACTAGAAAAGGTGCAACTGCAGCATATAAAGTTGTCGACGGATGTGAGAAAGAAAGTATAACAGCATTATTCATGTATGCGGCTGATGGTACACGTGCTCCACCCATGATTATGTacaaatataaagaaaatgtgcccgttaatatattaaaaaactgTCCAGTTGGCTGGGGCATAGGAAACTCGGAGACTGGTTGGATGACCACAGAAACATTCTATGAATATGTGACAAATGTTTTTCATCCGTGGTTAATGAGCATGAATGTTGAATTTCCTATTATATTATATCTGGATGGACATTCATCGCACGTCACCATTCCTTTAGTATCTTTTTGTAGAGAAAAGAAGTTAGAAATTATCGCACTATATCCAAACGCTACGCATATCATGCAGCCACTAGACATAGCATTCTTTCACCCTTTTAAAGAGTTGTGGAAAAAGAGCATAATCAAGTGGAAagctgagaaaaatatttccaggTTGCGAAAAGAACATATCCCATCAGTGATAATGAAGACGCTTGATTCTTTTTCTAACGAAAAACGAAGTATTCAAAATGGATTTAGAGCTAGCGGTTTGATGCCCTTCAATCCCGATGCGGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGATGA
- Protein Sequence
- MAVENKKKNQRKDRNTKKAKKSKPRNLHKHKNEVFVKKSNKKVQKNKENKEKRKQYPIKDIEQAVNAVKKGASYREAAKKFGVPTTSIHRAIRHPEKINSSHGPAPILSKEVEDEILYWILYRAARGFPVTKTELLDSVQTYVQKLKMQTPFTDDRPGRHWYENFRHRHPQIALRTPQHLTAIRAQVTEEDLRGWFTEVREYLTKNNLLTIHPSRVFNCDETNMQLIPKSEKIFTRKGATAAYKVVDGCEKESITALFMYAADGTRAPPMIMYKYKENVPVNILKNCPVGWGIGNSETGWMTTETFYEYVTNVFHPWLMSMNVEFPIILYLDGHSSHVTIPLVSFCREKKLEIIALYPNATHIMQPLDIAFFHPFKELWKKSIIKWKAEKNISRLRKEHIPSVIMKTLDSFSNEKRSIQNGFRASGLMPFNPDAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -