Gleg011286.1
Basic Information
- Insect
- Goniozus legneri
- Gene Symbol
- -
- Assembly
- GCA_003055095.1
- Location
- NCVS01001142.1:1792-2281[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.1e-09 6.4e-06 25.5 0.0 2 44 20 62 19 63 0.92 2 2 5.8 4.1e+03 -2.7 0.0 14 22 113 120 107 120 0.63
Sequence Information
- Coding Sequence
- ATGCCAaggaaatataaaagaaaagagggcGTAAGAGCTCGAGTCGTTTCTTGGACAACAGAACAACTACAGTTAGCAATCGATGAAATTGACAAGAAAGAATTAGGAATCAATGAAATATCTAGACGATTTGGGATTCCACCCATAACTCTACGAAGACGTTACAATATCAAAAACAAAACTAAGTTGactttacgaaaatattctattctagCGTTTCAATTCGTCGAAATGCTGCAAATTTGGCACAATTTTGATCGTAACAATCTAATGGCTGGAAATGAATGGTTCAAAAGTTTTATAGAGCGTAATGCAGAGTTGTCTATTCAACAAGTGGAAGGTTTATCTGTCGTCAGGGCTAAAGGTCTTAGCAGAGACCATAGAGTGAATAATCTCGTGAACTTCTAA
- Protein Sequence
- MPRKYKRKEGVRARVVSWTTEQLQLAIDEIDKKELGINEISRRFGIPPITLRRRYNIKNKTKLTLRKYSILAFQFVEMLQIWHNFDRNNLMAGNEWFKSFIERNAELSIQQVEGLSVVRAKGLSRDHRVNNLVNF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -