Gleg009869.1
Basic Information
- Insect
- Goniozus legneri
- Gene Symbol
- -
- Assembly
- GCA_003055095.1
- Location
- NCVS01003435.1:7558-8169[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-11 2.8e-08 33.0 0.0 2 35 45 78 44 83 0.88 2 2 6.7 4.8e+03 -2.9 0.0 11 23 160 173 160 174 0.69
Sequence Information
- Coding Sequence
- ATGCCGAAACGCCAAAGGAAAAAACCAGGTGATAAATGTACTTCAGCAAATACAGTaggcaaaaataaaatttccagaCAAAGTGGAAAGGTCAggaaaacgaataaaaagaaacatgaaaaattatggACCACTGATGCAATGTGCCAAGCAGTGGAAGCAGTGGGTAAGTCCATGACTCTCTCCGAAGCAGCACAGAAATTTGGAATACCTAAAAGTACTCTATCAATAAAGTTGAGGAATTTAACGCCAATTGAGTGTAAGAAAGGCCCTTCGACCGTTTTAAGCAACAAGGAGGAAGATGATATTGTAAATTGGATAATTTACTGTGCTGACAGAGGCTTTCCGGTGACCAAAAGTCATCTGCTTGATTGCGTTCAGGATTATATTGTAAggaataagataaaaaatccGTTCAAGAATAATCGACCTGGCAAGCATTGGTATGATAGTTTAATGCGACGACATTCTTCATTAGCAGTAAGAGTATCCCAAAATTTAACTACCACAAGAGCTGCTGTTACTGAAACTGATCTTCGCGGATGGTTTTCAAGAgttcacaaaaattttgagGAGAAAGATTTATTGACTTCCATTATTTATTCCAGCTGA
- Protein Sequence
- MPKRQRKKPGDKCTSANTVGKNKISRQSGKVRKTNKKKHEKLWTTDAMCQAVEAVGKSMTLSEAAQKFGIPKSTLSIKLRNLTPIECKKGPSTVLSNKEEDDIVNWIIYCADRGFPVTKSHLLDCVQDYIVRNKIKNPFKNNRPGKHWYDSLMRRHSSLAVRVSQNLTTTRAAVTETDLRGWFSRVHKNFEEKDLLTSIIYSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -