Gleg008688.1
Basic Information
- Insect
- Goniozus legneri
- Gene Symbol
- lola
- Assembly
- GCA_003055095.1
- Location
- NCVS01000263.1:188821-190582[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.9e-12 2.7e-09 36.2 0.0 1 40 351 390 351 393 0.95
Sequence Information
- Coding Sequence
- ATGAGTAACTCAGGGACTATTTGTCTGAGATGGAGAAACCATCAAGCTAATCTTTTAACGGTATTTGACATTCTACTGAGACACGAATGCTTTACCGATGTAACGATAGTCGTAGAAGAAGGAGCAATGGTGAAGTGTCATAAAGCAGTGCTCGCGGCATGCTCCATGTATTTTCAGAATGTATTAGCGCAGCACCAAGACAATTCTCATCCTACCATTATACTCAACAATATTACCGAGAGACAATTCCGCGCTCTTTTAGATTATATGTACCGAGGCGAAATTATGGTTGCCGGAGACGAGCTAGAAAATCTGCTGTCAGCTGCTCGAGTGTTACAAATTAGGGGATTAAATGACAGCCCGGGAGATGTCGTAACCGACACAGTTGAGGAGCCAGAAGATGAAGATGAAGTTTCTACGTGTCCTACAGCTGATTCAGAGCGTATAAGAGTTCGTTCAGTCACTACATCAGTGCCTGATCTTCGTCCGTCTCATAGTGCCTTTCTATATCGTAACACCTCAAATATACCTTCAGCACTTGCATCCTTTGCTGCCAACTCAGCTCCAGTACATCAGCCTCGTTATTCTATGTTATCTAACGATTTACCGGCTCATGTACTGGTTCAACAGTTACGTGGTCCATACGATAATGGATTAGAACATTACAATCACCACCTGTATGGTGGATATAACAATTTACGTGAAGAACTTGCTGCTAGAGGATTTAATGTAGGAAACCGTAATAGAGACACACCGATTTTAAGAAATGTGCTTGGACGTGAACAGCCTAGAGAAGATAATGGACTTACCCCACCACCTTCCGACCGTTCGACTAGCAGTACAGAAGATCCGAGAGCCGGCTCTCGTTCCCGATCCGGTAGCCGAAACACGCCTGAAGAGGCTGTGCCAGTACCTTCAACGTCATCGCAGGCTCATCAGGAGTTCAGATTTTCGGCTCAGCCACAACCCAGTACATCATCCAGGCCAaGTTCTTCGGCGCAGCCTAAAACCAAGGGGACCAAGCCAGAATGGAAGCGGTACAAACAGTACACGCGCGAAGACATGGCATCGGCTATAGAAGCAGTTGGCAGCGGTTTATCCGCTCTTCAGGCAGCAAGGAGATTTTCGGTACCACCTCGTACCCTCTACGATAAAGTAAAGAAGCTTGGTATCAATTCGCCAAAACCAACACGTAGAAGTAGCTCGAGTGGTAATAACGCAAATGTCGCTGGACCGAGTAGTGCATCATTCCCCTTCGGAATTGGTGGAAACGTTAACGGGGCCATTTATCAGAACATGAGAACCAGGATGGATTACGAGGATGGTGAAGCTTCTAATGCGACGAATGGAAACGATGAAAACAATGTGAAGAGCGAGGATGCTCCCATGGAAGATCTCAGCCAATATCCAAGCTCAAGCGGTACAGCTATGCGTGAACAACAGCCTAGTACGTCGCGTTGGATGGAAACAGAAGAACACGAAGACCCCATCAGGACTGTACGAGCTTTGGTCAGCAGAACTTCTTCGAACGAAGACGTTGAGGCTGTTAACTTGTCTATGCGAAGAGACCCACTAGAACcagaaattgaaatcaaagtCGAGCAGGAAGACGAAAACGATGAAGCGAGTTGA
- Protein Sequence
- MSNSGTICLRWRNHQANLLTVFDILLRHECFTDVTIVVEEGAMVKCHKAVLAACSMYFQNVLAQHQDNSHPTIILNNITERQFRALLDYMYRGEIMVAGDELENLLSAARVLQIRGLNDSPGDVVTDTVEEPEDEDEVSTCPTADSERIRVRSVTTSVPDLRPSHSAFLYRNTSNIPSALASFAANSAPVHQPRYSMLSNDLPAHVLVQQLRGPYDNGLEHYNHHLYGGYNNLREELAARGFNVGNRNRDTPILRNVLGREQPREDNGLTPPPSDRSTSSTEDPRAGSRSRSGSRNTPEEAVPVPSTSSQAHQEFRFSAQPQPSTSSRPSSSAQPKTKGTKPEWKRYKQYTREDMASAIEAVGSGLSALQAARRFSVPPRTLYDKVKKLGINSPKPTRRSSSSGNNANVAGPSSASFPFGIGGNVNGAIYQNMRTRMDYEDGEASNATNGNDENNVKSEDAPMEDLSQYPSSSGTAMREQQPSTSRWMETEEHEDPIRTVRALVSRTSSNEDVEAVNLSMRRDPLEPEIEIKVEQEDENDEAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00756762;
- 90% Identity
- iTF_00756762;
- 80% Identity
- iTF_00756762;