Gleg010615.1
Basic Information
- Insect
- Goniozus legneri
- Gene Symbol
- lola
- Assembly
- GCA_003055095.1
- Location
- NCVS01001331.1:42492-46261[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-14 8.9e-12 44.2 0.0 2 42 406 447 405 450 0.93
Sequence Information
- Coding Sequence
- ATGTCTATGCAGCAGTTTTGCTTGAGATGGAACAATCATCAACCAAACTTTATTTCAgtcttttcaaatttattgaataatgaaaCATTAGTTGATGTGACATTGGCAGCTGAGGGTAGACATTTGCAAGCTCACAAAGTTGTACTATCAGCCTGTAGTACATATTTTCAGTCATTATTTACCGTTAATCCATGTCAACATCCAATTGTCATACTAAaagatgtaaaattttctgatttgaaaattatggTTGATTTTATGTATTATGGCGAGGTTAATATTTCACAAGATCAATTGCCGTCTATTATTAAGACAGCAGAgagtttaaaaatcaaagGTTTAGCTGAAATGCATACAGCTTCACTGACAAAATGGCCAAGTAGTAATAGCGAACCTGAAGGTGGAAGCGGAGGAGGAATTGGTGGGAATAGTGGTACTGGTGGAGGATCTGGAGGAGGGGGTAGCACAGGAAGTCGAGGGAATGGGGAAAGAGGAGAATCATCTTCCCCTAGCCCATTACCCTTATCTCCAAGTTTTCGTAGAAAGAGGATACGGAAATCTTCAACTGGTTCTACATCTGGATCAGTGGATAAACCTgaagaaatgaatgaaataactTTAGTTGCTACCAATATTGTTAAACCTGAGCCATCTCTTGTACCACAAGAAAATAGGGAGAACTTGAGACGATCTACAATCAATAACACTGGGTCGCAAGGGAATATCGATGATGATCAAGTATCAATTatgAGAAATATGGAGAATAATTCTGCTGCAACATCAGTGCAAAGTGATGGGTCATTACAAGATGTAAATCAATCTGGAAGTTCTGTGTCGCAACCATCCGCTTCGTCACAACCACCAGCTCATCAGGGATTGCAATGGACTATAATGGAGCACACATATCCACGTTTCGCTCTGTCTTCGTGTCAAACGAATCTGTCTATCCAATCGTCGTCGGCATTTACGACATCCGAAATAACAGCATCCTCGACGATCAGCGAACAGTATCACAGCACTAGCAGTTCCAGTTCTAGTTGCGCTTTGTCGAACTATCCGAATACGGCTCACGGTGCGGCTGGTGGCGGTGGTGCTCTTCAACACGTGACCTCGAGCGGTCCGTCGCAGTCAGGCCAGTGCCCGAGCAATTGCCAGAGCCCTTGCGCTAGCCCGCAAACGACCGTCAAGCGAAAACGTTCGAGCAATCCTCAGGCGGACGAGAATTTCATACGCGCGCTCGACGCGGTGCGTTACGGTGGTATCGGTTTCTGCAAGGCCGCTCGCATGTTCGGCGTTAACAATCGCACACTCTGGTTGGAATACCGGAAGCGCGGTTACCCGAACAACCGGCCCAGCTTGAAGTCCCGGGTGAAGCACGAGTCCAACTCGTCACCGCCACCGCCACCAGCACCACCGAGCGTCTCCCAGCAGTCGAGCTCCTCATCGGGACAATCTGTCGGCTCTGCGAGCCCCACATCGATGGGACCCCCCACGACACCTCACAGTACTCACAACACCCACGGCACCCATACAATGCTGACGACCCATAGTCCTCACGCTATGCTCACCGGCTACATCGACGGTCGACACTCCGAATACGGTCTGCCGAATCCCTCGATGCCGATCAATCTGCACGGCGTTAATTACAACGCGATGTGA
- Protein Sequence
- MSMQQFCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNISQDQLPSIIKTAESLKIKGLAEMHTASLTKWPSSNSEPEGGSGGGIGGNSGTGGGSGGGGSTGSRGNGERGESSSPSPLPLSPSFRRKRIRKSSTGSTSGSVDKPEEMNEITLVATNIVKPEPSLVPQENRENLRRSTINNTGSQGNIDDDQVSIMRNMENNSAATSVQSDGSLQDVNQSGSSVSQPSASSQPPAHQGLQWTIMEHTYPRFALSSCQTNLSIQSSSAFTTSEITASSTISEQYHSTSSSSSSCALSNYPNTAHGAAGGGGALQHVTSSGPSQSGQCPSNCQSPCASPQTTVKRKRSSNPQADENFIRALDAVRYGGIGFCKAARMFGVNNRTLWLEYRKRGYPNNRPSLKSRVKHESNSSPPPPPAPPSVSQQSSSSSGQSVGSASPTSMGPPTTPHSTHNTHGTHTMLTTHSPHAMLTGYIDGRHSEYGLPNPSMPINLHGVNYNAM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00756756;
- 90% Identity
- iTF_00756756;
- 80% Identity
- iTF_00756756;