Basic Information

Gene Symbol
Tef
Assembly
GCA_003055095.1
Location
NCVS01000946.1:256752-258382[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5 3.4e+03 -2.2 0.4 14 26 127 139 125 140 0.72
2 2 2.8e-12 1.9e-09 37.0 10.4 1 62 147 208 147 210 0.97

Sequence Information

Coding Sequence
atgaattcctaTGGCCATTCCAGATCGGTTTGCGTCGATCCCTCGAGGGTCTCGGAAGCTTTCTCTACCTTCCATCTGTTACACAGTTGTCGACTCTTCGCACCGGCAACAGAATTTCGGAGATTCGACTCGTTCCTGCCGCGGGATTACTTGTTCAGCAATTCGGACGCGGCGACGGGCAACTCGTTGGggtcgccgtcgtcgtcgttgccGGGCTCGGCTATTTCGGCGACTATCTCGGTTCCGAGAAACTCGCATTGTTCGCCAATGCTTGCCACAATACCGACTCTGATGGATGCGGTCGGAATATCTCATCAATCGATCGGCCATACAGCCCAGTCCGGTGCCTCCTCCTACGACTTATTCGCTAACAACGGCGTTGCGAGCGTGAACGCGCGCAAGCGACGGAGCGAGAAGAAACCGATACCGGACGAGCAGAAGGACGAGAAATACTACGAGCGTCGTAAGCGAAACAATCAGGCAGCGAAGAAGTCCCGAGACGCGCGAAAAATACGCGAGGACCACATTGCACTGAGAGCGACATTATTGGAGCACGAGAACGCGGTGCTAAAGGCCCAGGTGCTCACGCTCAGGGAGGAAGCTCAGGCGCTGCGGCGAATGCTGATCAGCGATTTGACGAACGGTTCGCAGTCCCCGCATGTGCAGCGATCGTCGATATCGTCCGTCGTCGCCGTAGCTGCATCCCGCAAGCCCACGACCTGCGAATGA
Protein Sequence
MNSYGHSRSVCVDPSRVSEAFSTFHLLHSCRLFAPATEFRRFDSFLPRDYLFSNSDAATGNSLGSPSSSLPGSAISATISVPRNSHCSPMLATIPTLMDAVGISHQSIGHTAQSGASSYDLFANNGVASVNARKRRSEKKPIPDEQKDEKYYERRKRNNQAAKKSRDARKIREDHIALRATLLEHENAVLKAQVLTLREEAQALRRMLISDLTNGSQSPHVQRSSISSVVAVAASRKPTTCE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-