Basic Information

Gene Symbol
ATFC
Assembly
GCA_003055095.1
Location
NCVS01000414.1:26886-36992[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.9 4e+03 -2.4 0.0 37 62 108 133 106 135 0.74
2 2 1.2e-14 8.3e-12 44.6 8.8 2 63 289 350 288 352 0.95

Sequence Information

Coding Sequence
ATGGAAATCAATCAGGATCAGGAGATGTGGTTGTGGAAGTTGGAGCCTGTCTCCCCTAGTGGGAGTGTAGAGGCTGATGACGATTGGCTTCTCTCAACCGAAAAGCCCATAAATTCTCCTAATGACGCTACCGAACCTGTTATGTACGAAGACCATCCAACACGAGCTCAAGTTGCGACAAAATTATTAGAAGAATTGGACGAATGGATTAAAGAAGAGAACTTTTCCGAATGGCTAGAAGAGAAGATCGATCTGCCAATTTTCGAGGAATTGCCAACAGCGGTGTGCGAACCGAATCGTTTCGCGCTTGCTTATTCCGGACTTGCGAAACAACCATCTACGCTACAGCAGACTCCGCAACATCATCATGAGAGCACGACGACTATGCTTCAGGAATTCGAATCTGTGCTCGGAGACGTTAACGCCTGTCATCAGGTGATACAAGCGAGCACTTTGACACCACCGCAATCACCACCAcctgaaaaattcagcaaCGTCGATACCCAGCTGCTCGTGACACTTCAGCCTGTAGCGCCAACCATCACTGGGCCACAGTTCTCCTGCACTGTCGGCAACGACGTTAAATCCCTTTATATAGcGCCAACTGTCGAACAGTGGAACGCGGACAACATCGCGTTAGATTCACTCGGCAATGACGTGGCGAACGAGTTGGCCGTGGTCGACGAGTTCGTCCGTTCGTGTGCTAACGATAATGCACCGTCCAGTCCGTGCACGAGCACTGGCGGCAGTTGTATCTCGTCCGAGGACTCGATCGACGATCCCGATTGGATTCTGGACAACGTCGACAAGTCGAGCCATCGATCATCCAAAAATCGCTTTAAGCCGTACTCACGTCCTTCCGTTGAAGATAAGAAGGTGCGCAAGAAGGAGCAGAATAAAAATGCAGCGACCCGTTATCGCATGAAGAAGAAGCAAGAGATCAAGGAGATAATTGGAGAGGAACGCGAACTCGCCGAACACAACGAGAAATTGCAAAATCAAGTTAAAGATCTGCAACGTGAGATCGGTTACTTAAAAGGTCTGATGAAGGACTTGTTTAAGGCTAAGGGGTTGATTAAGTAA
Protein Sequence
MEINQDQEMWLWKLEPVSPSGSVEADDDWLLSTEKPINSPNDATEPVMYEDHPTRAQVATKLLEELDEWIKEENFSEWLEEKIDLPIFEELPTAVCEPNRFALAYSGLAKQPSTLQQTPQHHHESTTTMLQEFESVLGDVNACHQVIQASTLTPPQSPPPEKFSNVDTQLLVTLQPVAPTITGPQFSCTVGNDVKSLYIAPTVEQWNADNIALDSLGNDVANELAVVDEFVRSCANDNAPSSPCTSTGGSCISSEDSIDDPDWILDNVDKSSHRSSKNRFKPYSRPSVEDKKVRKKEQNKNAATRYRMKKKQEIKEIIGEERELAEHNEKLQNQVKDLQREIGYLKGLMKDLFKAKGLIK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-