Gqui009836.1
Basic Information
- Insect
- Gonioctena quinquepunctata
- Gene Symbol
- stc
- Assembly
- GCA_018342105.1
- Location
- JAFIRS010002597.1:26215-55903[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2 3.8e+04 -4.8 3.4 6 10 368 372 365 372 0.69 2 14 2 3.8e+04 -4.3 0.4 4 10 398 404 398 404 0.82 3 14 3.3e-06 0.064 14.4 12.5 3 19 412 428 408 428 0.93 4 14 7e-08 0.0013 19.7 12.9 1 19 464 482 464 482 0.97 5 14 6.1e-10 1.2e-05 26.3 11.5 1 18 522 539 522 540 0.98 6 14 1.5e-07 0.0029 18.7 15.1 4 19 587 602 580 602 0.87 7 14 1.3 2.6e+04 -3.6 2.0 5 10 631 636 631 636 0.93 8 14 0.029 5.6e+02 1.8 12.2 1 11 642 652 642 664 0.90 9 14 1.9e-10 3.7e-06 27.9 14.5 1 18 669 686 669 687 0.98 10 14 1.1 2.1e+04 -3.3 0.9 6 10 716 720 715 720 0.85 11 14 0.0031 60 4.9 15.2 1 19 726 743 726 743 0.93 12 14 2 3.8e+04 -5.0 2.6 9 14 761 766 761 773 0.56 13 14 1.5e-09 3e-05 25.0 15.1 1 19 779 798 779 798 0.97 14 14 0.0067 1.3e+02 3.8 15.7 1 18 808 826 808 827 0.92
Sequence Information
- Coding Sequence
- ATGTCTTCCCATGGCAACGAACAGCATTCCAATTCCATGTTTCCAGGTGAGCCTCAAACATACTTCGGAAGCAATTCTCAAAATATGAATGTTAATTTATCGAATTTGGAACCTACCGCTCAAGAATTTTATCCTATAAGTGCTGGTTCTCACAATGGAGCCGTTAAAAAGAGGCCTCAACAACAGTATAACAGAAATAGGTTCAGAGATAATGGAAGAGGAAGGAGTAGATATGGAAGCGGTAGAACTTTCAATGATTATGGAGCAAACTATGTGAAAGACAAATCGAAGGATAATCCAAGGGATACATATGGTAGTGGTGGAGGCAAAAATCCAGAGGAAACTAATAACGATTCATATGAAGATAAAGTTTACAGTAGAAATCGTTATCAGAACTCGgacaaatataaaaacacctataGTGGTTATGAAGAAAGGGAACACAATGAATCTAATTTTTCCCAGCTTAGGTATGGCCAAGATGAAAATCAATCTAGTTCCAATTCCTTCAGGGGATATGGAGGGAATTTTGAGAAATCTAGAAAATTTTATAGCAAGAATgcggaaaaaaaaatcgatgaaaaATCTCATCAAAATTATCAAGCTCCGTTAGACAAACAGAGAAACAACTATAGAGATAAGAAATATGGAAATGATAGTAGCTATCGAAATAATGGTACAAATGATTATTTTAGTAACAGGAAGGATCCATTTGCTGGTCATAATAGATCTGAAGAGTCCAGAGATGTCAGATACTTTAACCATTATAAACCAGGTTTCAAACGTTCAGaaaatagatataataaaaaagCCAATGAAGGAATTTCAGCGAATGACTGGAGAAAATACAGAACAAGTAGTGGAAAAAATGCTGATGAAAATTCTATCAGATCAAATAAGAAACTTGATGCCGCATCTCAGAAAGAGAGATTGGAAGAAATGCTGAACCGTCGTATGCTGGAATGTCTGGTatgttgtgaaaaaataaaaaacaacgacAAAGTTTGGTCTTGTATACTGTGTTATCACATACTACACCTCCACTGTGTGGCTGCTTGGGCAAAATCCTCCAAAGTGGAAAATAGCTGGAGATGCCCTGCATGCCAAAATGTTTGTACCGAATTACCGAACCAATACAGATGTTACTGCGGAAAAACACTTGAGCCTAGATATGAAGCCGGTACTGTACCACACGGTTGTGGAGAGATGTGCCTGAGGAAAGGACGCTCATGTGAGCATAAATGCACCATATTATGTCACCCGGGACCTTGCCCAGACTGTACTGTAATGGTTGCTAAACATTGTGGCTGTGGTGCAACGAAACCGATAGTCAAATGTAGCAATGACATAGAAATTGTTTGCGAAGCAATTTGCAATAAGACCCTAGAATGCAGTTCTCACAATTGCAAATCGAAATGTCATTCCGGAGATTGCTCCCCTTGCAAAGAGACTATCATCCAAGAATGCTTTTGCGGGAAGGAAGGGAGGAAAGTGCCCTGTTGTGCTGAATATAAGGGCCAAACAAAATATATCTGTGGAGAAATATGTGGAATATTATTGTCTTGTGGTAACCATCGATGCCAAAAGTTGTGTCACGAAGGGTCCTGTGAAGCTTGTGCCAGGGACATTGATAAGGTTCAGACTTGTCCTTGTGGAAAGACACTCCTAGAAAAAACGAGAACTTCTTGTCTCGATCCGATACCATGCTGTGATAAGCGTTGCGCGAAACCTTTGAGATGTGGTCAGCCAAGCGCCCCTCACAGATGCGAGCAAAATTGCCACGAAGGAGACTGTCCTCCTTGTCCTGCTACTACCGTAGTTAGATGTCGCTGTGGCCACATGGACAAGGAATTGTCCTGTCAGAAACTGACTACCAAAGCTGATGATGCGAGGTGTGAAAAAAAATGCACCAAGAAACGCTCCTGTGGCAAACACAAGTGCAACCAACGTTGCTGCATAGAAATTGAGCACATCTGCCCCCTTCCGTGCAACCATCAACTCTCATGTGGCCAACACAGGTGCGAACGTACCTGCCATTCCGGCAGATGTCCCCCTTGCATGGAAACCAGCTTCGAGGAGCTCTACTGCGAATGTGGCAAGAGTGTGTTATTTCCTCCCATCCCTTGTGGTACGAAACCTCCTAGTTGCAGCGAGCCCTGTTCAAGATCACGAACATGCGGGCACGAACCGAACCATTCGTGCCACATGGGGCCCTGCCCCCCTTGCACCGTTCTATCTAAACGTTGGTGCTATGGAAAACACGAGCAAAGGGCGGCTATACCCTGCCATCAGCAGAACTTCAGTTGCGGGTTACCTTGCGGCAAGGAAATGCCTTGCGGAAGACACAAGTGTGACAGACCGTGTCATGACGGTCCGTGTCCCCTTCCATGTAAGCAGTTCTGTGCCGCTCCGAGAAGCTTATGCGGTCACCCTTGTGGCAAACTGTGTCATGATCCACCATGCCCAGAGAGCAGTTGTAAATTCAGCGTACCTGTCACTTGCATTTGCGGGGTTCAAAAGGGTAAAAGGCCTTGTTTAGAAGTTGCGGATGAATTTAAGAATATACAAATGGCACAGATCAAGGATAAGATGGGTGCTTTGTCTAGTAATCATGCTGTGGATATTTCAGATATCCTGAATGTTCCCAAGAAACCACTGGTGCTCAAAATATTGGAGTGTACGGAAGAATGCCGAGTATTGGAAAGAAACCGCAGATTAGCCATAGGTCTGCAAATCCGCAATCCTGACCTCAGCCAGAAACTAACGCCGAAGTACTCTGATTTCATGAGACAGTGGGCTAAGAAAGATGTCCATTTCTGTCAAAGAGTTCACGATAAATTAACGGAACTGGTACAATTATCcaaaaatagcaagcaaaagagtCGATCCCATTCCTTCGAGTCGATGAATAGGGACAAGCGTCACTTCATCCATGACTACTGTGAGCATTTTGGGGTGGAAAGTGCAGCTTACGATATGGAACCGAATAGAAACATCGTAGCCACTGCAATCAAGGATAAATCGTGGCTACCCAGCATGAGTCTACTCGATGTCATTCAGAGAGAAAATGGGCAAAGAAGGGTACCGGGGCCTATGTCCGTTTCAGGCAGGAGTTCCACTGGAAAATCAGAAACCGTGTCCTTGAAACTGCCTAGCAGAGCACCGAGGGCTAACACACCCCCTGGTGAATTTGTTAACGGTTACAATCTGACTTTACAGTAA
- Protein Sequence
- MSSHGNEQHSNSMFPGEPQTYFGSNSQNMNVNLSNLEPTAQEFYPISAGSHNGAVKKRPQQQYNRNRFRDNGRGRSRYGSGRTFNDYGANYVKDKSKDNPRDTYGSGGGKNPEETNNDSYEDKVYSRNRYQNSDKYKNTYSGYEEREHNESNFSQLRYGQDENQSSSNSFRGYGGNFEKSRKFYSKNAEKKIDEKSHQNYQAPLDKQRNNYRDKKYGNDSSYRNNGTNDYFSNRKDPFAGHNRSEESRDVRYFNHYKPGFKRSENRYNKKANEGISANDWRKYRTSSGKNADENSIRSNKKLDAASQKERLEEMLNRRMLECLVCCEKIKNNDKVWSCILCYHILHLHCVAAWAKSSKVENSWRCPACQNVCTELPNQYRCYCGKTLEPRYEAGTVPHGCGEMCLRKGRSCEHKCTILCHPGPCPDCTVMVAKHCGCGATKPIVKCSNDIEIVCEAICNKTLECSSHNCKSKCHSGDCSPCKETIIQECFCGKEGRKVPCCAEYKGQTKYICGEICGILLSCGNHRCQKLCHEGSCEACARDIDKVQTCPCGKTLLEKTRTSCLDPIPCCDKRCAKPLRCGQPSAPHRCEQNCHEGDCPPCPATTVVRCRCGHMDKELSCQKLTTKADDARCEKKCTKKRSCGKHKCNQRCCIEIEHICPLPCNHQLSCGQHRCERTCHSGRCPPCMETSFEELYCECGKSVLFPPIPCGTKPPSCSEPCSRSRTCGHEPNHSCHMGPCPPCTVLSKRWCYGKHEQRAAIPCHQQNFSCGLPCGKEMPCGRHKCDRPCHDGPCPLPCKQFCAAPRSLCGHPCGKLCHDPPCPESSCKFSVPVTCICGVQKGKRPCLEVADEFKNIQMAQIKDKMGALSSNHAVDISDILNVPKKPLVLKILECTEECRVLERNRRLAIGLQIRNPDLSQKLTPKYSDFMRQWAKKDVHFCQRVHDKLTELVQLSKNSKQKSRSHSFESMNRDKRHFIHDYCEHFGVESAAYDMEPNRNIVATAIKDKSWLPSMSLLDVIQRENGQRRVPGPMSVSGRSSTGKSETVSLKLPSRAPRANTPPGEFVNGYNLTLQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -