Gqui012292.1
Basic Information
- Insect
- Gonioctena quinquepunctata
- Gene Symbol
- ZFY
- Assembly
- GCA_018342105.1
- Location
- JAFIRS010000176.1:225467-359043[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 1.1 1.2e+02 4.4 2.4 1 20 26 45 26 47 0.95 2 24 0.024 2.7 9.6 7.5 1 23 105 127 105 127 0.98 3 24 0.0033 0.38 12.4 1.5 2 23 134 155 133 156 0.94 4 24 0.02 2.3 9.9 1.8 1 23 168 190 168 190 0.95 5 24 0.0055 0.64 11.6 6.6 1 23 198 220 198 220 0.98 6 24 1.1 1.2e+02 4.4 2.4 1 20 273 292 273 294 0.95 7 24 0.043 5 8.8 1.8 1 23 321 344 321 344 0.93 8 24 0.34 40 6.0 3.8 1 19 352 370 352 372 0.96 9 24 1.3 1.5e+02 4.2 0.5 2 13 380 391 379 393 0.88 10 24 0.33 39 6.0 1.0 1 23 524 547 524 547 0.93 11 24 0.0092 1.1 10.9 8.3 1 23 555 577 555 577 0.98 12 24 0.00099 0.11 14.0 2.1 2 23 584 605 583 606 0.95 13 24 0.011 1.3 10.6 4.8 1 23 618 640 618 640 0.94 14 24 0.0042 0.49 12.0 2.5 1 21 648 668 648 669 0.94 15 24 1 1.2e+02 4.5 2.8 1 20 779 798 779 800 0.95 16 24 0.49 57 5.5 3.4 1 23 827 850 827 850 0.93 17 24 0.008 0.93 11.1 3.2 2 23 859 880 858 880 0.96 18 24 0.64 74 5.1 0.4 2 13 887 898 886 899 0.89 19 24 1.1 1.3e+02 4.4 3.3 1 23 990 1013 990 1013 0.91 20 24 0.008 0.93 11.1 3.2 2 23 1022 1043 1021 1043 0.96 21 24 0.037 4.3 9.0 1.8 2 23 1050 1071 1049 1072 0.93 22 24 0.038 4.4 9.0 3.1 1 23 1084 1106 1084 1106 0.93 23 24 0.0011 0.12 13.9 0.3 1 23 1142 1165 1142 1165 0.96 24 24 1 1.2e+02 4.5 5.3 1 23 1180 1202 1180 1202 0.97
Sequence Information
- Coding Sequence
- ATGGATTATGTGGGGATTAATCTGAAATATTGTGATTTCAACCCACAGAAAACGAGGATGTACGAAGGGGAACTATTCAAATGTGAATTTTGCAAATGTTCAATGACCAACGAGGACTTTTTGAATAGACATAAAGTCATGTGCCCGAAACGTATATCCCAAATGAAAAATAGGAACGATGGAGTAGAAGGTAATTTCAATATGGAGACTAAGAAAAAACACAGCCGTAGCTACTGCCAGTACAAAAGTATTCAGAAGACGGACATGGACCGACACGTAATGGCTGTACACGAAAAGGAAAATGCAAGGATGTTCTATTGCGGCAAATGCAACTACAAAACTTGTCGTAGCGGTCATTTGAATCAACATTCGAAAACCCATGAGCAGTTTCGACCGCTGAAATGTGAAGAATGCTCGAAGGAATTCAATGAGAAACGGCAACTGGATGGTCATATTCTCAAACATCACCCGCATATTGCACATACTATCACCTCAAAAATTCATTCTTGTGTAATTTGTGGTTTCAAAAGTGTTGTTAAATCAAATCTCACCAGTCACAGATATCAACATGACAAAGAAAATGCGCCGAAATTCCATTGTACACAATGCAAACACTCTAGCAATCGGAAGGgagatttgaaaaaacatttattaacACATTTGGCCGACAAACCGTACGTTTGCAGAAAAAGAGGAGGTGAACTTCTATCCCTGCAAATTATGTCACATAGGGCTCGCACTATGGATTATGTGGGGATTAATCTGAAATATTGTGATTTCAACCCACAGAAAACGAGGATGTACGAAGGGGAACTATTCAAATGTGAATTTTGCAAATGTTCAATGACCAACGAGGACTTTTTGAATAGACATAAAGTCATGTGCCCGAAACGTATATCCCAAATGAAAAATAGGAACGATGGAGTAGAAGGTAATTTCAATATGGAGACTGAGAAAAAACACAGCTGTAGCTACTGCAAGTTCAAAAGTAATAGGAAGGATAACTTGGACCTACACGTAATGGCTGTACACGAAAAGGAAAACGCAAGGATGTTCAATTGCGGGGAATGCAACTACAAAACTTGTCATATGACTAATTTGAATAGGCACTCAACCCATGAGCAATTTCGACCGCTAAAATGTGAAGAATGCTCGAGGGAATTCAATCAAAAACAGAAACGAGATGAGCGAAACTGGTTATTAGTTCTTCTGTTGAAGCACAATAACATAAAAACCACACTGTTCCACTACGCCGAATTGATCGATGCCAGTAACGAGACCAATTCCAACTACTTGAGAGCAAAACGTGGTAGCGTTCCAATACAACGAAGGTTTATATTATCGCCAGAAGACAAGGAGTTGTTGACTTATTACGGTCTATCCTTTGCAAAAAATTTGTGCATCGATCCGAAGAGTATTTTGAACCCGTTCAGAAAAAAGAGGAGATGTTCAATGACCAACGAGGACTTTTTGAAAAGACATAAAGTCATGTGCCCGAAACGTATATCCCAAATGAAAAATAGGAACGAAGGAGTAGAAGGTAATTTCAATATGGAGGCTAAGAAAAAACACAGCTGTAGTTACTGCCAGTACAAAAGTATTAAGAAGGGGGACATGGACCGACACGTAATGGCTGTACACGAAAAGGAAAACGCAAGGATGTTCTATTGCGGCAAATGCAACTACAAAACTTGTCGTAGGGGTCATTTGAATAAACATTCAAGAACCCATGAAAAATTTCGACTGCTGAAATGTGAAGAATGCTCGAAGGAATTCAATGAGAAACGGCAACTGGATAGTCATATTCTCAAACATCACCCGCATATTGCACATACTATCACCTCAAAAATTCATTCTTGTGATATTTGTGGTTTCAAAAGTATTAATAAATCACATCTCACCAATCACAAATATCAACATAACAAAGAAAATGCACCGAAATTCCATTGTACACAATGTGAATTCTCTAGCAATCGGAAGAGAAATTTGAAAAGGCATATCGATACTAGTAACGAGACCAATTCCAACTACTTGAGATACTTCAAGTGCGCAAGGAATGCGAAAGAGCAAAACGTGGTAGCGTTCCAATACAACGAAGGTTTATATTATCGCACATgtaaaaatgtgccaaaagacAAGGAGTTGTTGACTTATTATGGTCTATCCTTTGCAAAGAATTTGTGCATCGATCCGAAGAGATATTTTGAACCCGTTCAGGAAAAAGAGGAGGTGCAAATTCTGTCACAGATGGCTCGCACTATGGATTATTTGGGGATTAATCTAAAATATTGTGATTTTAACCCACAGAAAACGAGGATGTACGAAGGGGAACTATTCAAATGTGAATTTTGCAAATGTTCAATGACCAACGAGGACTTTTTGAAAAGACATAAAGTCATGTGCCCGAAACGTATATCCCAAATGAAAAATAGGGACGATGGAGTTGAAGGTAATTCCAATATGGAGACTAAGAAAAAACACAGCTGTAGCTACTGCCAGTACAAAAGTAATAATAAGAATCACGTGGACAGGCACGTAATGGCTGTACACGAAAAGGATGACGCAAGGATGCTCAATTGCGGGGAATGCAACTACAAAACTTGTGATATGACTAATTTGAATAGGCACTCAAGAACCCATGAGCAATGTCGACTGCTGAAATGTGAAGAATGCTCGAAAGAATTCAATCAAAAACAGATCGATGCCAGTAACGAGACCAATTCCAACTACTTGAGATACTTCAACTGCGCAAGGAATGCGAAAGAGCAAAACGTGGAAACGTTCCAATACAACAAAGGTTTATATTATCGCAAATgtaaaaatgtgccaaaagacAAGGAGTTGTTGACGGTCTATCCTTTGCAAAGAATTTGTGCATCGATCCGAAGAGATATTTTGAACCCGTTCAGAAAAAAGAGGAGGGACAATGGAGTAGAAGGTAATTTCAATATGGAGACTGAAGAAAAACACAGCTGTAGCTACTGCCAGTACAACAGTAATAATAAGAATCACATGGACACGCACGTAATGGCTGTACACGAAAAGGATAACGCAAGGATGCTCAATTGCGGGGAATGCAACTACAAAACTTGTGATATGACTAATTTGAATAGGCACTCAAGAACCCATGAGCAATTTCGACCGCTGAAATGTGAAGAATGCTCGAAGGAATTCAATCAAAAACAGGATCGAGATGGTCATATTCTCAAACATCATCCGCATATTGCACATACTATCACCTCAAAAATGCATTCTTGTGATATTTGTGGTTTCAAAAATGTTTCGAAATCAAATCTCACCAGGCACAAATATCAACATGATAAAGAAAATGCTCCGAAATTCCATTGTACACAATGTGAATTCTCTAGCAATTggaaaaacagtttgaaaaagcattcattattACATTTGGATGGCAATCCGTTCGTTTGCAGTGAATGCAAAGAAGGTTTCAACCAAAAAATTCAACTAGATTCGCATATCTTGAATAGACACAAAGACAACGAACAATTACTTCGATCGATTTCTTCCAAAATTCATAGTTGCTATCTTTGTGAATATCAAAGTATTTCGTTGTCACATATGAAAACTCATTTGAAGAGACACAAATAA
- Protein Sequence
- MDYVGINLKYCDFNPQKTRMYEGELFKCEFCKCSMTNEDFLNRHKVMCPKRISQMKNRNDGVEGNFNMETKKKHSRSYCQYKSIQKTDMDRHVMAVHEKENARMFYCGKCNYKTCRSGHLNQHSKTHEQFRPLKCEECSKEFNEKRQLDGHILKHHPHIAHTITSKIHSCVICGFKSVVKSNLTSHRYQHDKENAPKFHCTQCKHSSNRKGDLKKHLLTHLADKPYVCRKRGGELLSLQIMSHRARTMDYVGINLKYCDFNPQKTRMYEGELFKCEFCKCSMTNEDFLNRHKVMCPKRISQMKNRNDGVEGNFNMETEKKHSCSYCKFKSNRKDNLDLHVMAVHEKENARMFNCGECNYKTCHMTNLNRHSTHEQFRPLKCEECSREFNQKQKRDERNWLLVLLLKHNNIKTTLFHYAELIDASNETNSNYLRAKRGSVPIQRRFILSPEDKELLTYYGLSFAKNLCIDPKSILNPFRKKRRCSMTNEDFLKRHKVMCPKRISQMKNRNEGVEGNFNMEAKKKHSCSYCQYKSIKKGDMDRHVMAVHEKENARMFYCGKCNYKTCRRGHLNKHSRTHEKFRLLKCEECSKEFNEKRQLDSHILKHHPHIAHTITSKIHSCDICGFKSINKSHLTNHKYQHNKENAPKFHCTQCEFSSNRKRNLKRHIDTSNETNSNYLRYFKCARNAKEQNVVAFQYNEGLYYRTCKNVPKDKELLTYYGLSFAKNLCIDPKRYFEPVQEKEEVQILSQMARTMDYLGINLKYCDFNPQKTRMYEGELFKCEFCKCSMTNEDFLKRHKVMCPKRISQMKNRDDGVEGNSNMETKKKHSCSYCQYKSNNKNHVDRHVMAVHEKDDARMLNCGECNYKTCDMTNLNRHSRTHEQCRLLKCEECSKEFNQKQIDASNETNSNYLRYFNCARNAKEQNVETFQYNKGLYYRKCKNVPKDKELLTVYPLQRICASIRRDILNPFRKKRRDNGVEGNFNMETEEKHSCSYCQYNSNNKNHMDTHVMAVHEKDNARMLNCGECNYKTCDMTNLNRHSRTHEQFRPLKCEECSKEFNQKQDRDGHILKHHPHIAHTITSKMHSCDICGFKNVSKSNLTRHKYQHDKENAPKFHCTQCEFSSNWKNSLKKHSLLHLDGNPFVCSECKEGFNQKIQLDSHILNRHKDNEQLLRSISSKIHSCYLCEYQSISLSHMKTHLKRHK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -