Basic Information

Insect: Gonioctena quinquepunctata
Gene Symbol: Rreb1
Assembly: GCA_018342105.1
Location: JAFIRS010000412.1:588744-634308[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00014 0.016 16.7 1.1 1 23 84 106 84 106 0.96

2 16 0.03 3.5 9.3 0.8 1 23 119 141 119 141 0.97

3 16 6.8e-05 0.0078 17.6 6.4 1 23 147 169 147 169 0.98

4 16 3.6 4.1e+02 2.8 0.4 1 9 229 237 229 237 0.92

5 16 0.17 19 7.0 0.9 2 23 259 281 259 281 0.96

6 16 0.42 49 5.7 1.3 1 19 327 345 327 348 0.80

7 16 0.082 9.4 8.0 0.1 1 23 474 496 474 496 0.96

8 16 0.00013 0.015 16.8 2.5 1 23 505 527 505 527 0.98

9 16 0.00094 0.11 14.1 3.1 1 23 533 556 533 556 0.97

10 16 0.00056 0.065 14.8 3.0 1 23 943 966 943 966 0.97

11 16 0.0018 0.2 13.2 0.8 2 23 1177 1198 1176 1198 0.97

12 16 0.14 16 7.2 6.3 1 23 1204 1227 1204 1227 0.97

13 16 0.1 12 7.6 0.7 1 20 1255 1275 1255 1276 0.94

14 16 0.11 13 7.5 1.0 1 23 1334 1357 1334 1357 0.95

15 16 0.019 2.2 10.0 0.4 3 23 1404 1424 1402 1424 0.93

16 16 0.0085 0.98 11.1 5.9 1 23 1430 1452 1430 1452 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00014	0.016	16.7	1.1	1	23	84	106	84	106	0.96
2	16	0.03	3.5	9.3	0.8	1	23	119	141	119	141	0.97
3	16	6.8e-05	0.0078	17.6	6.4	1	23	147	169	147	169	0.98
4	16	3.6	4.1e+02	2.8	0.4	1	9	229	237	229	237	0.92
5	16	0.17	19	7.0	0.9	2	23	259	281	259	281	0.96
6	16	0.42	49	5.7	1.3	1	19	327	345	327	348	0.80
7	16	0.082	9.4	8.0	0.1	1	23	474	496	474	496	0.96
8	16	0.00013	0.015	16.8	2.5	1	23	505	527	505	527	0.98
9	16	0.00094	0.11	14.1	3.1	1	23	533	556	533	556	0.97
10	16	0.00056	0.065	14.8	3.0	1	23	943	966	943	966	0.97
11	16	0.0018	0.2	13.2	0.8	2	23	1177	1198	1176	1198	0.97
12	16	0.14	16	7.2	6.3	1	23	1204	1227	1204	1227	0.97
13	16	0.1	12	7.6	0.7	1	20	1255	1275	1255	1276	0.94
14	16	0.11	13	7.5	1.0	1	23	1334	1357	1334	1357	0.95
15	16	0.019	2.2	10.0	0.4	3	23	1404	1424	1402	1424	0.93
16	16	0.0085	0.98	11.1	5.9	1	23	1430	1452	1430	1452	0.98

Sequence Information

Coding Sequence: ATGCAAGGGACCGTTTTCATGCCCCACAACCCTCAACAAGGCCTCCCACCCCCATCAGATACCATGGTTTCCGGAATGGAAGAACTGCCTTCACCACATCAGAAAACCAAAGAATCATTGGCCAACCAAAGTGACTCAGGAATATTCTCCTCAACTACCAACACTACGGTTGATCAGTCAGACCTTTCCAAAAATTCAGAAAACTGCGAAACCGACAACAGAAGTGACTGTTCCTCCCCCGAAAGGAAGTACCTGTGCCCTATCTGCGAGAAAATGTTGACATCCCAACACGAATTTACGCTTCATATCCGATCACACAATAATGAAAACGAACTACAAGACGCTGAAAAAGGTTACATCTGTAGGATATGCTGCAAGGTGTTAAGTTCCAGCAGCAGCCTCGATAGACATGTTCTAGTGCATAGTGGCGAACGCCCTTTCCACTGTAAATATTGTGGGGACACCTTTACAACGAACGGAAATATGCACAGACATATGAGAACGCACTCCCATAAGACTGAGAACAGCTACGAGTCCGATGGAAGCACAGATAGCGGCAGTTCCAAAAGTACCGAATACAACAACAACAAAGTGGAGAAAACGAATAagagaaaaaacgaaaatgaagATTGCGGAGACAAAAAAATGAGGGAGCACTCCTCAGATTCTGAAATACCCCAAACCTTCAAATGTCCTGTTTGCGATAGAAGCGATTTCAACTCTGTTTTAGTACTGGATATGCATTTGGAAGATAACCATCCAGACTACCCTGCCAAATGCGTAACATGCAATCAAGTTTTCCTCAATAACAAGCTCCTTACTATCCACAAATCTACTGTTCACGAGAACCCCATGAACAGGCAACCAGTCGTTGGCTTCAAAGATCTGACTTTTGTAGACTTCTCCAGTGAAAAATTTCCGCACATTGCTCGAAGAGAATGCGAGATGAATCTGCACAAAGTATCTAGTGGGCTCAAGTTCCAGTGCAAAAAATGTAACCGTGCGTTTCCCTGCTCTCAATCTCTAGGCATTCACGAGAAGAGTTGTGATTCCTCAGAGTACACGAATGGCATGGACCTCACTAGAATATCTCAACCAGAAATAAGACGCATGGAGTTCTTTTCGGGGttgaaattagtaaataattCTCCAGAAAAGCAGCCTATGGTCCCACCTCCAGTGACTAATAAGCTAAGAGAACATCTTGCTAAGGCTATGGACAACACCAAAGATTTGGCAGATATCCAGTCAATTTTATCCAACATAAATTTACGACAACTGCAAGCTAAAAAAGGCGAACTGCAGCTCTCACCGCCCAAGCAACATTTAGATCTATCATCAGATTACCAAAAAAACGAAGAGGAAGAATCTCAAGATGTTTTTGCTGTTGAGTTCCGCAAAATGAAATTGCGTGGTGAATTTCCATGTAGGTTGTGTACTGCGGTTTTTCCGAACCTTCGAGCACTGAAAGGACACAATCGGGCACATCTCAATGGTAACACTAACGGAACCTACCACTGCAATATGTGTCCACACTCTTCGATTGACAAAGCAGCTTTGAGTCGACATATGCGTACGCATAATGGTGACAGGCCGTACGAATGTTCTCTTTGTAACTACGCATTTACTACCAAAGCCAACTGCGAGAGGCATTTGAGGAATAGACATGCAAAGACCACCAGAGAGGAcgtgaaaaaatctataatatatCACCCTTCTGAAGATCCAACGAACGAAGAACTGAACAAACTTACCGCCAAAGATGATCCAAGGAAACATGCTGGTGATTCAGCATTTGAGAAAATACATTGTTCAACTCCTAAATTCTCAGATATTTCACGTAGTAACACGTTCGAAATGAAGGGGGAAATGAATATTCTGAAACCTATATCACAATCAATTCCAGATCTACAGAATCGAACTAGGATGTTTTCAAATACCGATGTCATCCACAAGAGTAACGGCCCTCCTCCTCCTAATTTTGGCTACTCGCCCACTAAAATCCAagtgaaaaatattgagagtCTCAAAGAAAATAAATCTTTCACAGGAGACTCGGAAGAGGAGTATTTTGATGATGAAGATGACGAACCTCTGGATCTAGTTCTGGACCTGAGTAAGAAGAAAGCCCAAGAAGAAAGCAAACAGTTCGAAGGagcagaagaagaagaagaagaagaagaagaaggggAAGAAGATGAACCCCAAGATTTGACTATAAAATCCCCTCCTCTTCCTTCTCGTATATCCAATCAAATACCTCCTAACATGGGCCAGATATTCGCTCAACACTTGTTCAAAACTCCTCCGAAAATAGATCCTGCTACTTTATATGCAACGCAGCTTGCCCTTTACCGGAGCGGTTTTCCAGCTCTGCCAAATTGGACAGGGTTCCCTCTTAATCCCTTGTTGTTTTCCTCCTTACCCCCTTCACTTCCACCAAATGCTCAGGACATCAAAGAACGAATGCAGAGATTCCAATTATGTGGTGGCTCTATGGTATCAGAAGAGTTAAAAAATCTTCACAACATGCATAACCCCCTCCGAAGTCCCACCATGCCTTTCCCAAACGGATTCAAGACAGATTCTCAACCAGAAATGAGGATGGAGAACAACTTCAGTACACCTAAAAAATCCGAGGAAATAAAGCCGTTGTGCCTAAATATTGATAATAGCTTCAACGAAAGCGTGCCAAAATTGCATAGTCCAGGGCATATAAATAAACAACTTGATATGATGCAGTCTCCTAACTCTGTAAAAATGGTTATAAAAAACGGAGTATTAATGCCAAAGCAAAAACAGAGAAGGTACCGAACGGAAAGGCCGTTCACATGCGAACATTGCTCGGCAAGATTCACACTGAGATCAAACATGGAGAGGCATATCAAGCAGCAACACCCTCAGTTTTGGTCACAACGACAACGAAGCACCGTCGGAAATCCGGGAAAAAAATCTCAGTTGCCTATGAAACCCAACTACTGCGATCTCAGCATCCCAAACTACGAGATGCCGAAGATACACGAGTTTGGCGATAGCAAAGATATGTTGAATGAGAAACTTAAATTCGCGATTCTATCCCAGCAATTACGAGCAAATCAAGGTGTCCAAGAATCTAGAGAAGATGAGGAGGGAGATTTCGCTCTCGTTATAGACGAAAACGAAGAGAAGCTCGAACAGGTAAACAATTATCATCGAAATGAGTATAGAAGTCGTATTCTGGAAGAAAGATTGAAGGAATTGCAACAACTAAAGAATGAAAATAGTCCAAAACTCGAGGAGAATTCCGATCTGGTTCCTGTGTCGAAGCTTTTGGATGATGCTTCACAACAGCAGTTCAAAGAGTTTTTCAAGAGAGATGTAGAGGAACAAGAAGCGGGATTGGTAAGCGAGGAAGATGAAGAAGGATTAGTTGCCAGCGGCAGTACAAGTGAGGCAAATGCGTCCGGGACCGAtgaaaacaaGTCAGAATCGGACACAGTACAACCTGTCAAGAAAAAATCCGCCTACTCCCTAGCGCCGAATCGTGTAAGCTGTTCTTATTGTAGTCGGAAATTCCCGTGGACTTCTTCCTTGCGAAGACATATCCTTACTCACACTGGACAAAAACCTTTTAAATGCAGCCATTGCCCGCTACTATTCACAACTAAGTCCAACTGCGATCGCCACCTGTTACGTAAACATGGCAACGCTGCAACGACTATTTCTAATGAGGCTGGAAATAACAATTCCAACTACTTGATGCGAAATGTCCCTGAACGGCCGTTCAAGTGTTCCAGTTGCCCCAGCAGTACGTTCGCCACTTATTCCAATTTGAAGAAGCACATAAGCTGCAAGCATTCGACTAACGCCCAAGGAGATGACATAAAGGCTCAAGGATATGAAGCTGGTAGTTCAGAAGACGAGAAGGTACCGAATGTAGAGACGAAACAAGATTGGGAGAGCCAAATAGCGTTTAACAAACTGCCCATAGAGCCTACGGTACAGAATTCCGACCTTCCTTTCAAATGTCATCTGTGTGAAGGTTCATTTTCTGAAAGACAAGAGGCGCTTGACCATATCCGAGACAAGCATGTATCGGAATACGACTTACTCATGTCCAAGAACGCCTTGGACAGCAATGCCACCACACCGGACGAATCGGCACATCAAGAAGATGAAGAGAACGAGATTCGCGGGAAATTTCCCGACTATTCCAACAGGAAAGTGATCTGCGCATTTTGTATGCGCAGATTTTGGTCGGCAGAGGATTTGAGAAGACACATGCGCACACACACCGGCGAGAGACCCTTCAGTTGTGATATATGCAGGCGTAGGTTCACTCTGAAGCACAGCATGCTGCGCCACAGGAAGAAACACAATGTCAATTTTGAGCATGATACCAACAATAGTGACGAAGAAGCAGTTAATAGTTCGTCGCCTCCGTATAAGGTCGAAGGTAATATTCCTCATAGAACTGACGAGTCTGATGGGACCGAAGGGGGTGATTTGATTAGTAATTTATTGGGGTTGAGAGATAGATCCATCATAGATAAAGTACTGGCTGCTTCTGCGGATGATGCCGCTAAATTGTTGGGGGTAAAAAACGGAGTCAGAGAATAG
Protein Sequence: MQGTVFMPHNPQQGLPPPSDTMVSGMEELPSPHQKTKESLANQSDSGIFSSTTNTTVDQSDLSKNSENCETDNRSDCSSPERKYLCPICEKMLTSQHEFTLHIRSHNNENELQDAEKGYICRICCKVLSSSSSLDRHVLVHSGERPFHCKYCGDTFTTNGNMHRHMRTHSHKTENSYESDGSTDSGSSKSTEYNNNKVEKTNKRKNENEDCGDKKMREHSSDSEIPQTFKCPVCDRSDFNSVLVLDMHLEDNHPDYPAKCVTCNQVFLNNKLLTIHKSTVHENPMNRQPVVGFKDLTFVDFSSEKFPHIARRECEMNLHKVSSGLKFQCKKCNRAFPCSQSLGIHEKSCDSSEYTNGMDLTRISQPEIRRMEFFSGLKLVNNSPEKQPMVPPPVTNKLREHLAKAMDNTKDLADIQSILSNINLRQLQAKKGELQLSPPKQHLDLSSDYQKNEEEESQDVFAVEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRAHLNGNTNGTYHCNMCPHSSIDKAALSRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKTTREDVKKSIIYHPSEDPTNEELNKLTAKDDPRKHAGDSAFEKIHCSTPKFSDISRSNTFEMKGEMNILKPISQSIPDLQNRTRMFSNTDVIHKSNGPPPPNFGYSPTKIQVKNIESLKENKSFTGDSEEEYFDDEDDEPLDLVLDLSKKKAQEESKQFEGAEEEEEEEEEGEEDEPQDLTIKSPPLPSRISNQIPPNMGQIFAQHLFKTPPKIDPATLYATQLALYRSGFPALPNWTGFPLNPLLFSSLPPSLPPNAQDIKERMQRFQLCGGSMVSEELKNLHNMHNPLRSPTMPFPNGFKTDSQPEMRMENNFSTPKKSEEIKPLCLNIDNSFNESVPKLHSPGHINKQLDMMQSPNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQFWSQRQRSTVGNPGKKSQLPMKPNYCDLSIPNYEMPKIHEFGDSKDMLNEKLKFAILSQQLRANQGVQESREDEEGDFALVIDENEEKLEQVNNYHRNEYRSRILEERLKELQQLKNENSPKLEENSDLVPVSKLLDDASQQQFKEFFKRDVEEQEAGLVSEEDEEGLVASGSTSEANASGTDENKSESDTVQPVKKKSAYSLAPNRVSCSYCSRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNAATTISNEAGNNNSNYLMRNVPERPFKCSSCPSSTFATYSNLKKHISCKHSTNAQGDDIKAQGYEAGSSEDEKVPNVETKQDWESQIAFNKLPIEPTVQNSDLPFKCHLCEGSFSERQEALDHIRDKHVSEYDLLMSKNALDSNATTPDESAHQEDEENEIRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHNVNFEHDTNNSDEEAVNSSSPPYKVEGNIPHRTDESDGTEGGDLISNLLGLRDRSIIDKVLAASADDAAKLLGVKNGVRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00330010;
90% Identity: -
80% Identity: -