Gqui032630.1
Basic Information
- Insect
- Gonioctena quinquepunctata
- Gene Symbol
- ZNF711
- Assembly
- GCA_018342105.1
- Location
- JAFIRS010000143.1:973517-994340[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.54 62 5.4 1.0 3 23 60 80 59 80 0.85 2 18 0.032 3.7 9.2 2.5 1 23 86 108 86 108 0.98 3 18 1.4 1.7e+02 4.0 3.8 2 23 112 133 111 133 0.92 4 18 7.3 8.4e+02 1.8 0.2 2 12 141 151 140 162 0.82 5 18 0.0047 0.54 11.9 1.3 2 23 171 193 170 193 0.91 6 18 5.8e-06 0.00067 21.0 2.0 2 23 203 224 202 224 0.97 7 18 2e-05 0.0023 19.3 3.5 1 23 230 252 230 252 0.98 8 18 0.00047 0.055 15.0 1.4 2 23 259 280 258 280 0.97 9 18 2.2e-05 0.0025 19.2 0.6 1 21 286 306 286 307 0.93 10 18 0.01 1.2 10.8 0.2 1 23 405 427 405 427 0.98 11 18 0.039 4.5 9.0 0.2 1 23 450 472 450 472 0.97 12 18 0.23 27 6.5 0.7 1 23 611 633 611 633 0.96 13 18 1.9 2.2e+02 3.6 1.3 2 23 641 662 640 662 0.88 14 18 0.00013 0.015 16.8 0.5 2 23 671 693 670 693 0.96 15 18 0.002 0.24 13.0 1.0 2 23 705 726 704 726 0.97 16 18 3.9e-05 0.0045 18.4 0.8 1 23 732 754 732 754 0.98 17 18 0.015 1.7 10.3 4.9 2 23 761 782 760 782 0.97 18 18 0.00076 0.087 14.4 0.1 1 21 788 808 788 809 0.94
Sequence Information
- Coding Sequence
- ATGGAAGTTGAGCATATTCGACCACAGTCGTTCAAGGAAACCTCTCAGAAAAATTACATGGAAATCAAAACcaagaaattatttgaacattatttcGACCCCCACAATGAAGATTATCTTTCACTCCAACAAATATACAACATTGTAGATATCAACGAACTGAAGGAATCAAGAATATGTTCCATTTgcgaaaaaaaattctacaagcACTTAGATTTCGCTTTGCATTCGATCGATCATTCCGAAAAGAGGTTGTTTTCCTGTCATTTATGCAATAGTGAGATGAGTCAAGAGAAAACCTTGAGAAATCACATGGAAACTCATGAAAGACTCCAGTGTACCACGTGTGGGAAGAGCATGAGAAACAGGAAATTCGCTCATAGACACTCGAGTTCACATTTGTTCGAATCCGAACTCGTCAAATGTCGCCTCTGCGGAAAACAACTGAGAAGAATAGACAGCAAGGACCACAGAATCCGGGCACATCAAGGAAGTACCCCTGGCGCGATCAAATGTTCCGTTTGCGACAAAGAATACCTAAGCAGGTCGAGCCTCAAGAGACACTACTCTTTCCAACACAAAGAGTTCGGCATCAATACGTCCAAAGTATGTGATATTTGCGGGAAAGTGTGCAGCAACACGCAAAAACTCCAAGAACACATGCGCACCCATACCGGAGACAAACCTTTCGAGTGTGCGCACTGCCCGAAAAAGTTCATGACGAAACAAGTCCTGAAAAAACACATGAGATCTCATACCGGTGAGAAACCGCTGGTTTGCAAATTTTGCGGGAAAAAATTCAAGTACGACGGTGGGTACCGGTACCATTTGAAGACGCACACAGGGGAAAAATCGCATTGCTGTCCCATTTGTGGAAGAGCTTTCATTTCCAAATCGAATATGAAAGTTCATGTGAAAGGAGGTTACCAGCTGTCAAatttattaccaaaaataatgtttatacCTGACTACGTAACTCAAAAAGTACTCAAAATGCTGAACTCACCTTCAAACTGCATTGACTTCAAACACAAGTCATCTGTTGATACAATAATTCTTTTAATAACTGAAAATGATGACACTTCCAAAGGAAATTTGGAAATCTTATTCCAAAAAGAACCAGAGGACCAATGTAACAATAGCAAAAATAATGCCCTCGAAACCAATGGAAGAGGAGAAACCAGTGGAGTCATAGAAGGCAATCTGTTCCGTTACAAGTGTACAATATGCGGTTACATCCTAAAAGGTGTGGAAGGTTTCAAGGACCATCTCAAGCTGCATCGACAAAAGTATGAAGCCCTTGAACCCAGAAAATCCAGTACACTCAAGGAGAAAAATCTGACCCATTACAAGTGTAGAATATGCGGTTACATACTAAAAGGTGTGGAAGGCTTCAACGATCATCTCAAGCTGCATCGAGACGAAAACGCAATCGTCAAATGCACGCTCTGCGAGAAACCGATGAGGAAAAAAGATATACGAGGTCACAAAGAGACCATGCACAAAGCCAAAGTGGAAGGTAACGCCAAATGTTCCGAATGTGACAAGGAGACAATCCTTCAAATGGGTTCGTTATGCAATGTTATCCTGATAGTTGCAGCTGAAAATGATGATAAcccaaatgaaaatatattagcTGAGGTGTGCAATGGCTTGGAATTCTCAAACGAAGAAGCTATGGAAAATGGATCGGACACTTATTCAAAGGAAATATTCCATGAACCAGATGAAGAACAATGCAAAGAAAACCCAGAAGAAGAAACGCATCAATACCCTGAGCAGAGGAGTggaatggaaattaaaaaaatgtataaggtGGATAGTCCTCGTTACAAGTGTAGAATATGCGGTTTCATTCTTCATAGTCAAGAACTAATGGGCGATCATTTGAAACTGCACGATTTCGAAGAGGAAATAATAAAATGCACAATTTGCACAAGATCAATGAAGAGAAGAGAAATGCAAAAACATAGAGACACCGTGCACAAAGGCAAGTATCAAGGTTTCATCAAGTGTTCCGAATGTGACAAAGAGTATGCACGCATAGCCACTTTGAGAAAACACTACTCAACCAATCACGAAGAATTTGGAATTATAGAAACGTGTCTGATGGTTTGCGACGTATGTGGACAGAAGTGTCGAGGCAACAACGCGTTTGAAGCCCATAAAAGAACGCACACCGGGGAAAAACCGTTTGTTTGTCCCATATGCCCGAAGGCATTCAGAATTAAGAAATCTCTGGAGTGCCATATGAGGGTACATACCGGAGAGAAGCCGATGGTTTGTCAATTCTGCGGGAAAAAATTTGCGCATCATTTCCCATATAGGTACCATCTGAAAACCCATACTGGTGAAAAGTCGTTCTTCTGTGAAGCATGCGGAAGAGGGTTCATTTCGAGATCGAATATGAAACAGCACTGGAGAGTTTGTGCGGGACCGAAAGAAGAAGTTCTTCAATAA
- Protein Sequence
- MEVEHIRPQSFKETSQKNYMEIKTKKLFEHYFDPHNEDYLSLQQIYNIVDINELKESRICSICEKKFYKHLDFALHSIDHSEKRLFSCHLCNSEMSQEKTLRNHMETHERLQCTTCGKSMRNRKFAHRHSSSHLFESELVKCRLCGKQLRRIDSKDHRIRAHQGSTPGAIKCSVCDKEYLSRSSLKRHYSFQHKEFGINTSKVCDICGKVCSNTQKLQEHMRTHTGDKPFECAHCPKKFMTKQVLKKHMRSHTGEKPLVCKFCGKKFKYDGGYRYHLKTHTGEKSHCCPICGRAFISKSNMKVHVKGGYQLSNLLPKIMFIPDYVTQKVLKMLNSPSNCIDFKHKSSVDTIILLITENDDTSKGNLEILFQKEPEDQCNNSKNNALETNGRGETSGVIEGNLFRYKCTICGYILKGVEGFKDHLKLHRQKYEALEPRKSSTLKEKNLTHYKCRICGYILKGVEGFNDHLKLHRDENAIVKCTLCEKPMRKKDIRGHKETMHKAKVEGNAKCSECDKETILQMGSLCNVILIVAAENDDNPNENILAEVCNGLEFSNEEAMENGSDTYSKEIFHEPDEEQCKENPEEETHQYPEQRSGMEIKKMYKVDSPRYKCRICGFILHSQELMGDHLKLHDFEEEIIKCTICTRSMKRREMQKHRDTVHKGKYQGFIKCSECDKEYARIATLRKHYSTNHEEFGIIETCLMVCDVCGQKCRGNNAFEAHKRTHTGEKPFVCPICPKAFRIKKSLECHMRVHTGEKPMVCQFCGKKFAHHFPYRYHLKTHTGEKSFFCEACGRGFISRSNMKQHWRVCAGPKEEVLQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -