Gqui032648.1
Basic Information
- Insect
- Gonioctena quinquepunctata
- Gene Symbol
- ZNF711
- Assembly
- GCA_018342105.1
- Location
- JAFIRS010000143.1:636122-657760[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 2.2e-07 2.5e-05 25.5 3.1 1 23 10 32 10 32 0.98 2 17 2.1 2.4e+02 3.5 0.1 1 23 105 127 105 127 0.91 3 17 6.1 7e+02 2.1 1.6 1 19 162 180 162 184 0.74 4 17 0.00031 0.035 15.6 2.6 1 23 190 213 190 213 0.97 5 17 0.0034 0.39 12.3 3.1 3 23 225 246 223 246 0.94 6 17 0.58 66 5.3 0.1 3 17 256 270 255 270 0.92 7 17 0.1 12 7.7 0.9 2 23 408 429 407 429 0.91 8 17 0.4 47 5.8 3.4 1 23 435 457 435 457 0.98 9 17 0.00068 0.078 14.5 1.3 1 23 463 485 463 485 0.91 10 17 0.00011 0.013 16.9 3.0 1 23 491 514 491 514 0.98 11 17 0.00041 0.047 15.2 3.3 1 23 526 549 526 549 0.93 12 17 0.0006 0.07 14.7 6.3 1 23 608 631 608 631 0.97 13 17 0.12 14 7.4 1.1 1 23 641 664 641 664 0.94 14 17 0.00021 0.025 16.1 0.5 2 23 673 694 672 694 0.97 15 17 1.6e-05 0.0019 19.6 1.4 1 23 700 722 700 722 0.97 16 17 4.1e-06 0.00047 21.5 2.8 1 23 728 750 728 750 0.99 17 17 0.0047 0.55 11.9 0.2 1 22 756 777 756 777 0.93
Sequence Information
- Coding Sequence
- ATGCGTACCCATACTGGAGACAGACCGTACGAATGCAAAGAATGTGGGAAGTGTTTTACCCAAAAAACACCGTTGACGGTCCACATGAGATATCACACTGGCGAACGGCCCTACACTTGTGCCCTGTGTAACACTGGGCCCAAAACACGGAAGAGAAAATCAAAGATCAGAAAGGAATTGGACCCCGACTTCACTCCGGAGAAGAGAAAACATAAATCCAAACAAAACTCCCAATCGCCCAAACCAACAGATGCGTCTGATGATTTGAAACAAGAACCTCGGCAGCCGGACGTCGAAGAGAACTACCTGAAATTCGCCTGTGAAGTGTGCGATGAAAAAATCCACTCGAGTGTTGCCTTTGCTCTGCACTCAATCTCCCATTCCCAGGACAACAAGTACCACTGTCACTACTGTAATTACAAGAGCACCTTGGTTAAGCGAATAAACAAACATATGTTATTCCACGGTAACACGGGCAAGTACTTTCAGTGCGAAATATGCCAGGCTATTTTTCCCGAGTGCATTCAAGCCGTCGAGCACAAGCACTTCCATACCGGAGAGATGGCGTATCAGTGCGAAATCTGCGACAAGCACTTCATGTTCTCCTGGCTGCTCCTCACCCACAGAAGGCTGTTCCACCCCTCGATGAAAGACGATCCTTCAAGTCTTTTTTGCGAGACCTGCAACATGCATTTCGGGACTAGATCTGGTCTGAGGAAGCATATTTTTAGGAAGCACAACAAAGTTCCGCAAGAACACCCGCTTTGTGATGTCTGCGGGAAGACTCTAGCTAGCAACGAGACCTTGAAGTTTTTCGACGCTACGATCCTGGGTAAACTCCTATACGGACCCGGACTTTCGATAACTCCGGTGAAGGCCGATAATTACGATTGCAACTTCACCGCCAACCCCAGTTCAGTTAGCCTCAACAATCCCTTCAACGGGTACAGCGGTGCGGTGGCTTCCTACTTGCATTCGTTGTCGCAAATCAAACAAATTAACGAtatttccaaagaccccatcgaTATATCCAGCTTCCTCTCCAAAGATCCAACGGATATTTCAGACTTTCCAAAGCCAGAGCAAAATCTTGAAGTTCCCGGACCGGATTCTCGGAACATCATCGATTGCTTGAAGCAAAGCCAAAGAAAGAAGAAACCTGATAAACCAAAGAACGTGGAAAGTACGCAAGCACCGCGAATAGAGCTTGACGAACCTATCCATTGTGATACTTGCAACGAAACTTATAAAAACAACGTAGCGTTTGCCTTGCATTCTGGAAAGCACAGCAAGGATGGTAAATTCACTTGTCACCTGTGCGACTTTCGAAACGCCTCCAAGTATCACATAGAGATGCATATACGAGCTCATGAAGGTACCACCAAGTACAAGTGCGAAATATGTGGCAAGGCTTTCACAGTCAGCACGCACGCCATAGAGCACAAGTACTTCCACACTGGGGAAAAACCTTTCGAATGTGACATATGTGGGAAGCACTTCATGTTTTCGTGGTTCTTGACCTCCCACCGGCGTACGCAACATTGGGAACTAGTGACTGGGAGTCCTCTAGTCAAGTACGACTGCACCATATGTAACAAGCACTACACGTCTTCGACAGGATTGAAGAGGCATAATCTGAGCAAACACAATGCTTCTGGCGTGGATTCCTCACTTGATTTCATCATCAAGGAAGAATCGATAGAAATTGTCGATCACCCCGTTTTGCTGGAACTCGATAACTATTCCGAATATATCAATGAAACCATTTCCGCTGAAGAACAAACCTCTCAGTCTGAAGAGCACAACGACGATGGCTTGAAACATAAGTGCGATATTTGTGGGATATACTTCAAGCACTTTAGGTCTTTGACAAGGCATAGAAAAAGACTGCATTGGAAAGTACTCGGAATCCCATCAGTGTACAATTGCACCATATGCAACAATCACTACATAACACTAACAGGATTGGACAGACATAACCTGAGAGTACACAACCCTGATGATGACCTTTCAGTTCCGTGTGACATCTGTGGCGAAAGGTTATCTAATCAAAACACActgagatatcataagagaaagcATGAAGGACACAAGCAGCATATTTGTGACATTTGCTCCAAGACTTTTTCTAGGAGAGAAATATTGAAAGTACATATGAGGGTGCATACTGGCGAAAAACCGTACAAATGTCAGTACTGTGATAAAGGGTTCACGCAGATGAGTCACATGAGAGCCCATGAACGTATCCATAAGGGTGGAGGGCCATATACTTGTAAGGTTTGCGGCAAGGGCTATATCACGAAGGATGTAATGGATTATCACATCAAAACTTGTGATGGTATCATTTCGAAAGACAATGTGAAATAG
- Protein Sequence
- MRTHTGDRPYECKECGKCFTQKTPLTVHMRYHTGERPYTCALCNTGPKTRKRKSKIRKELDPDFTPEKRKHKSKQNSQSPKPTDASDDLKQEPRQPDVEENYLKFACEVCDEKIHSSVAFALHSISHSQDNKYHCHYCNYKSTLVKRINKHMLFHGNTGKYFQCEICQAIFPECIQAVEHKHFHTGEMAYQCEICDKHFMFSWLLLTHRRLFHPSMKDDPSSLFCETCNMHFGTRSGLRKHIFRKHNKVPQEHPLCDVCGKTLASNETLKFFDATILGKLLYGPGLSITPVKADNYDCNFTANPSSVSLNNPFNGYSGAVASYLHSLSQIKQINDISKDPIDISSFLSKDPTDISDFPKPEQNLEVPGPDSRNIIDCLKQSQRKKKPDKPKNVESTQAPRIELDEPIHCDTCNETYKNNVAFALHSGKHSKDGKFTCHLCDFRNASKYHIEMHIRAHEGTTKYKCEICGKAFTVSTHAIEHKYFHTGEKPFECDICGKHFMFSWFLTSHRRTQHWELVTGSPLVKYDCTICNKHYTSSTGLKRHNLSKHNASGVDSSLDFIIKEESIEIVDHPVLLELDNYSEYINETISAEEQTSQSEEHNDDGLKHKCDICGIYFKHFRSLTRHRKRLHWKVLGIPSVYNCTICNNHYITLTGLDRHNLRVHNPDDDLSVPCDICGERLSNQNTLRYHKRKHEGHKQHICDICSKTFSRREILKVHMRVHTGEKPYKCQYCDKGFTQMSHMRAHERIHKGGGPYTCKVCGKGYITKDVMDYHIKTCDGIISKDNVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -