Gqui032649.1
Basic Information
- Insect
- Gonioctena quinquepunctata
- Gene Symbol
- ZBTB41
- Assembly
- GCA_018342105.1
- Location
- JAFIRS010000143.1:897285-922500[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.066 7.6 8.3 2.6 1 23 47 69 47 69 0.83 2 19 0.00018 0.021 16.3 1.5 1 23 75 98 75 98 0.97 3 19 0.00038 0.043 15.3 3.0 1 23 110 133 110 133 0.96 4 19 3.6e-05 0.0041 18.5 0.7 2 23 143 164 142 164 0.97 5 19 1.1 1.2e+02 4.5 1.3 2 23 205 226 204 226 0.92 6 19 0.57 66 5.3 3.2 1 23 232 254 232 254 0.97 7 19 0.044 5 8.8 1.1 1 23 257 279 257 279 0.95 8 19 0.00098 0.11 14.0 0.5 2 23 286 307 285 307 0.95 9 19 8.4e-05 0.0097 17.4 3.8 1 23 316 339 316 339 0.93 10 19 2.5e-05 0.0029 19.0 0.3 2 23 349 370 348 370 0.97 11 19 3.6e-05 0.0042 18.5 2.2 1 23 376 398 376 398 0.97 12 19 4.1e-05 0.0048 18.3 0.5 1 23 404 426 404 426 0.98 13 19 3.8e-05 0.0044 18.4 0.1 1 22 432 453 432 453 0.96 14 19 0.48 55 5.5 0.2 2 19 515 532 514 536 0.87 15 19 0.013 1.5 10.5 1.9 1 23 541 563 541 563 0.97 16 19 0.00064 0.074 14.6 0.5 2 23 627 649 626 649 0.94 17 19 0.00014 0.016 16.7 1.0 3 23 660 680 659 680 0.97 18 19 0.00072 0.082 14.4 0.3 1 23 686 708 686 708 0.98 19 19 0.78 89 4.9 4.9 1 23 714 736 714 736 0.96
Sequence Information
- Coding Sequence
- ATGTATGCATATATGACCCTTGCTAGaTTTTCCGAGGAACTATGCAATCCCTTTGATCCGGTTGAAGAATTCGATTATCCGGAATTTGAAACTCTGGAAACACTCAGGCTGCGCGAGCTAGAAAACCCCGAAGGTATATACAAGTGCGACATATGTTTCAAAACCTTCAGAAGCGGAACTTTCGCCACCGAGCACAAGAACTTCCACACTGGAGAAACGCCCTTCGAGTGCGAAATATGTGGCGAGCATTTCATGTACTCACGATCGTTAGCTCTGCACAGACGCTCGAAACACGGGAGTAAGGCCAACACCAATCCATACGATAAGTACTACTGCTCCATTTGTGACAAGCACTACAAATCTAGGAACGGTCTGAGAATCCACAAGATCCGAAATCACAGCCTCTCCGAAGACGATCGCACCGTACCTTGCGACATATGTGGCAAGAGGCTGTCGAGTAAAGGAAAACTATCCATCCACATGCATACGCATACGGGTTACAAGCCGATCAGAGAGAAGAAACCGACGAGGAAACGACAAATGAGGGACAAAACTACAcgtaaaaaattgaaatcattcaTAGTAAACCTCTTGGAACTCTCAGTACCATTGTATTGCAAAATTTGCGATAACCACTACGACACCAATGAAGATTTTGCCTTCCACTCCAGAGTACACAACGAAGACCTTCACTATTCTTGTCATCTCTGCGAATTCCAATGCGATTCGAAAAAAGCCATCAAAGCGCACGTGCTGAACCACAACGTATTCAAGTGTGAACCATGcgggaaaattttcaaattcaaacatgGTGCCTACAGGCACGCGGAAATCCATCTGGACCAGAACACCGTACAATGCGAAGTATGCGGGAAGAGTCTTCAGAGACAATCTCTGAACACCCATATGAAACTTCTACATTCCGCTGAATTCTCTGGCACTTTGTTCGAGTGCCCTATTTGCAAAAAAGTCTACAAGTACAACTGCAGTCTGAAAAAACACATTTCCTTCAATCACAGGGAGCTCGGGATAGACGTATCTGTGGTATGTGACATTTGTGGGAGGAGAATATCCAGTAAGAGCAAGTTGCAGCAACATCTTAAAATTCACAGTGGCGAAAAACCGTTCTCTTGTACCTTTTGCGACAAGCAGTTTCGATCAAAGGATACCATGAAATCCCATATGGTTGTGCATACGGGGGAAAAACCTTACATATGCGGCTACTGCGGGAAAAAGTTCGGACAGAGTGCTCCGTATAGATATCACATTAAAACTCACACTGGCGAAAAATCGTACAGCTGCTCTATTTGCGGAAAAGGATTCATTTCTAAAGCTAACTGGAGACTCCACGTAAAAACTTGCGATATTCTATCCaACAtcgaaatatttaataattatccTTTTTTCGATCCTATCGTGCAAGAGGTTATCACTGGGCACGAATACATCAAAATCATCATAGAAGATGATTCAGCAGACGAAGCTACAACATACGATAATATCGATAACATTGAGAATCTCGATGACCCCATCGAGCCTCTGATGTGCGACATTTGCTACCTCTCTTTCAACACCAACCTGGAGTATATTCTGCACTCTGGTTTCCATTATGAAGGAAAATTCCGCTGCAATCAATGTCAGTTCATTAGTCACGACGAATCATCGCTAAGGGTCCACATGGAACAACACGACCACCTCAAATGTACCATATGTGGCTTAGATTGGATAAAAACCAGAAAGATCGCTTTTGAGCATTCCATGAGCCACGTCCATCGTGCCGAACAGATAGAGTGTTCACTTTGTTGCAAATATATAGAAAGACAGCACTTTCCAAAGCATACCGTCACTTCCCATAAAGGCAGCAAACCCGGGACTTGGAAATGCGGCGAATGTGATGAGGAATTCATCTACCGAGAAAAACTCCGTAAACATTACTCGAACAGTCACAAAGAATGTGGGTTAGTAACGTCTAAGATATGTGAGATATGCGGCAAAACCTTCGCGAACCTCAAGTCTTTGATATGCCATCAAAGAATCCACAATGGAGAAAACCCGTTTCAGTGTGCTGAGTGCCCTAACGTGTATGGAACCAAAATGGCACTCGAGAGGCACTTCCGGAAACACAGTTGGGTTATGCCTCACATTTGCAAACATTGCGGAAAAGGAATCGACTGTTATAACGACTACGTCAAACATATGAGAATACACACTGGGGAGACCCATACAGCTACGCAAGTGAAAAATAGTATCAAACCCAAGTTGAGAACGCAACAGAAATCACGTGCACCAGCTAAGGACAAGTTAAATGGAAGAAATGATTAG
- Protein Sequence
- MYAYMTLARFSEELCNPFDPVEEFDYPEFETLETLRLRELENPEGIYKCDICFKTFRSGTFATEHKNFHTGETPFECEICGEHFMYSRSLALHRRSKHGSKANTNPYDKYYCSICDKHYKSRNGLRIHKIRNHSLSEDDRTVPCDICGKRLSSKGKLSIHMHTHTGYKPIREKKPTRKRQMRDKTTRKKLKSFIVNLLELSVPLYCKICDNHYDTNEDFAFHSRVHNEDLHYSCHLCEFQCDSKKAIKAHVLNHNVFKCEPCGKIFKFKHGAYRHAEIHLDQNTVQCEVCGKSLQRQSLNTHMKLLHSAEFSGTLFECPICKKVYKYNCSLKKHISFNHRELGIDVSVVCDICGRRISSKSKLQQHLKIHSGEKPFSCTFCDKQFRSKDTMKSHMVVHTGEKPYICGYCGKKFGQSAPYRYHIKTHTGEKSYSCSICGKGFISKANWRLHVKTCDILSNIEIFNNYPFFDPIVQEVITGHEYIKIIIEDDSADEATTYDNIDNIENLDDPIEPLMCDICYLSFNTNLEYILHSGFHYEGKFRCNQCQFISHDESSLRVHMEQHDHLKCTICGLDWIKTRKIAFEHSMSHVHRAEQIECSLCCKYIERQHFPKHTVTSHKGSKPGTWKCGECDEEFIYREKLRKHYSNSHKECGLVTSKICEICGKTFANLKSLICHQRIHNGENPFQCAECPNVYGTKMALERHFRKHSWVMPHICKHCGKGIDCYNDYVKHMRIHTGETHTATQVKNSIKPKLRTQQKSRAPAKDKLNGRND
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -