Basic Information

Insect: Gonioctena quinquepunctata
Gene Symbol: -
Assembly: GCA_018342105.1
Location: JAFIRS010000143.1:728532-756145[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 30 0.17 20 6.9 3.5 1 23 85 108 85 108 0.90

2 30 0.047 5.4 8.7 2.1 2 23 118 139 118 139 0.98

3 30 0.00067 0.077 14.5 3.2 1 23 148 170 148 170 0.98

4 30 0.00074 0.086 14.4 2.6 1 23 176 198 176 198 0.96

5 30 9.2e-05 0.011 17.2 0.2 1 23 204 227 204 227 0.96

6 30 2.5e-05 0.0029 19.0 2.2 1 23 322 344 322 344 0.98

7 30 1.6 1.8e+02 3.9 1.0 3 23 351 371 349 371 0.89

8 30 0.33 39 6.0 7.3 1 19 377 395 377 399 0.87

9 30 0.0009 0.1 14.1 1.0 1 23 405 427 405 427 0.94

10 30 0.011 1.2 10.7 6.0 1 23 433 455 433 455 0.98

11 30 0.004 0.46 12.1 0.9 1 23 461 484 461 484 0.97

12 30 5.3e-05 0.0061 18.0 4.6 1 23 579 601 579 601 0.98

13 30 3e-06 0.00035 21.9 2.6 1 23 634 656 634 656 0.97

14 30 0.0021 0.24 13.0 1.9 1 23 662 684 662 684 0.98

15 30 0.011 1.2 10.7 6.0 1 23 690 712 690 712 0.98

16 30 1.9 2.2e+02 3.6 0.2 2 23 809 830 808 830 0.94

17 30 0.49 56 5.5 3.0 1 23 836 858 836 858 0.97

18 30 0.027 3.2 9.5 2.1 1 23 864 886 864 886 0.90

19 30 0.00033 0.038 15.5 3.6 1 23 892 915 892 915 0.98

20 30 0.00033 0.038 15.5 3.5 1 23 927 950 927 950 0.94

21 30 0.024 2.8 9.6 0.9 3 23 961 981 960 981 0.98

22 30 5.3e-05 0.0061 18.0 3.8 1 23 987 1009 987 1009 0.96

23 30 8.6e-06 0.00099 20.5 0.8 1 23 1015 1037 1015 1037 0.98

24 30 0.00032 0.037 15.5 1.5 2 23 1092 1113 1091 1113 0.96

25 30 0.37 43 5.9 1.0 1 22 1148 1169 1148 1170 0.85

26 30 0.00035 0.041 15.4 3.5 1 23 1176 1199 1176 1199 0.97

27 30 0.00032 0.037 15.5 2.2 1 23 1211 1234 1211 1234 0.95

28 30 0.0037 0.43 12.2 1.3 3 23 1243 1263 1242 1263 0.99

29 30 1.9e-05 0.0022 19.4 0.9 3 23 1271 1291 1270 1291 0.99

30 30 1.8e-05 0.002 19.5 1.4 1 23 1297 1319 1297 1319 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	30	0.17	20	6.9	3.5	1	23	85	108	85	108	0.90
2	30	0.047	5.4	8.7	2.1	2	23	118	139	118	139	0.98
3	30	0.00067	0.077	14.5	3.2	1	23	148	170	148	170	0.98
4	30	0.00074	0.086	14.4	2.6	1	23	176	198	176	198	0.96
5	30	9.2e-05	0.011	17.2	0.2	1	23	204	227	204	227	0.96
6	30	2.5e-05	0.0029	19.0	2.2	1	23	322	344	322	344	0.98
7	30	1.6	1.8e+02	3.9	1.0	3	23	351	371	349	371	0.89
8	30	0.33	39	6.0	7.3	1	19	377	395	377	399	0.87
9	30	0.0009	0.1	14.1	1.0	1	23	405	427	405	427	0.94
10	30	0.011	1.2	10.7	6.0	1	23	433	455	433	455	0.98
11	30	0.004	0.46	12.1	0.9	1	23	461	484	461	484	0.97
12	30	5.3e-05	0.0061	18.0	4.6	1	23	579	601	579	601	0.98
13	30	3e-06	0.00035	21.9	2.6	1	23	634	656	634	656	0.97
14	30	0.0021	0.24	13.0	1.9	1	23	662	684	662	684	0.98
15	30	0.011	1.2	10.7	6.0	1	23	690	712	690	712	0.98
16	30	1.9	2.2e+02	3.6	0.2	2	23	809	830	808	830	0.94
17	30	0.49	56	5.5	3.0	1	23	836	858	836	858	0.97
18	30	0.027	3.2	9.5	2.1	1	23	864	886	864	886	0.90
19	30	0.00033	0.038	15.5	3.6	1	23	892	915	892	915	0.98
20	30	0.00033	0.038	15.5	3.5	1	23	927	950	927	950	0.94
21	30	0.024	2.8	9.6	0.9	3	23	961	981	960	981	0.98
22	30	5.3e-05	0.0061	18.0	3.8	1	23	987	1009	987	1009	0.96
23	30	8.6e-06	0.00099	20.5	0.8	1	23	1015	1037	1015	1037	0.98
24	30	0.00032	0.037	15.5	1.5	2	23	1092	1113	1091	1113	0.96
25	30	0.37	43	5.9	1.0	1	22	1148	1169	1148	1170	0.85
26	30	0.00035	0.041	15.4	3.5	1	23	1176	1199	1176	1199	0.97
27	30	0.00032	0.037	15.5	2.2	1	23	1211	1234	1211	1234	0.95
28	30	0.0037	0.43	12.2	1.3	3	23	1243	1263	1242	1263	0.99
29	30	1.9e-05	0.0022	19.4	0.9	3	23	1271	1291	1270	1291	0.99
30	30	1.8e-05	0.002	19.5	1.4	1	23	1297	1319	1297	1319	0.98

Sequence Information

Coding Sequence: ATGTTCAATGTTGATCGGTTATGTTTCAGATTTATTAAAGATCTCACCATCGAAGACAAACCACTGAAAACAGGCAAGGACGAGCTCCTAGAAGTTGATTACCCAGAATTTATAACCGAAAAAGCTATCAAAAACATCACAGACCCCCAATACATTTgctccaaatcattaatgtgtaccaTTCCGGAAATGGAGCACAAACATTCCGAAGCCGAAGATGGAAAATATTTCCCATATTCCCGGAAAAAAGATTACTATTGCACGCCTTGTGACAAACATTATAAGAGCAGGGGTGGTCTGAGACATCACAATATCTACGAACACAACCTATTCGACACAGGTCGAGAGGCAACGTGCAATGTCTGTGGGAAAATACTATCTTGTAAAAAGGAACTTGTAATCCACAAACGCACACACCCCGGATTTGAAGGGTACAAACCGTATCCTTGCGATATTTGTGAAAGCAGCTTCAACAATATACATCATCTGAAGAATCACAAGCGTGTGCATACGGGAGAAAAGCCTTTCAAATGTCAGTATTGTGGCAAGGGCTTCTCGCAGCAGTCTTGCATAAAGCCCCACGAACGGATCCACACCGATAGCAGGCCGTATGTTTGTGAAATTTGCGATAAAAAGTTCACTTTGTTAAGGTCTCTAGTGAACCACCTGAAATGGATTCACAAAAAGAAATTgtcgaaaaaaatttatgaaaggaaatttgaaCAACTCATCATTAAGGAGGAGCTACTGGAAAACGTCGATTACCCAGAAATCATTGACTTTGAAACATTCCCGTATTTAAATTCAATCGTCGAAGATTGTGTCTCCAACACTAAATTGGAATTGAATACTACTTGTGATAAGATAAAGGAGAGAGAACAATCCGCTTCATGCATATCTGGGAAAAAATTATCCGACGGAAAAATAGCAAGACTTCATGACACTCGCAAAGAGATCAAGCCTTTTTCTTGCGATATTTGCCAAAAACGCTTCGCCAGAATCCACAATCTGGAAAGTCATAAACGGATCCATACGGGTGAAATGATCGAGTGCCAATGTTGTGGGGAAAAACTCTTAGATAAAAGTTCACTGAGACTTCACCTACTAACGCACAAAGACTATAGGCCTTTTTCTTGCGATATTTGCAATAAAAGCTTTCACACAGAGCACCATCTGAAGTGTCATAATGTTATCCATACGGGCGAGAAAAAATACAAATGCCAATATTGTGGAAAGGCCTTTTCGTGGAGTTCGAACAAGAGGACTCACGAAATGGCCCACACCGGTCTCAAGCCCCATCGTTGTGATACTTGTCGAAGGAGTTTCAGCGAACTTCAACATCTGAAGGATCATAAACTCACCCATACGGGAGAAAAACCTTACGAATGTCAGTACTGTGAGGTGACCTTCGGAAGGCGCTCTTATATCTATAATCACGTAAAAAAAGTTCACAACAAAACTCATAGTGTACTAAAAGATAATGTgagAATTGAAGAACTCATCATAAAGGAGGAGCCCCTGGAAAACGTCGATTACCCAGAAATCATTCACTTTGGAACCTTTCCGTATTTGAATTCTAGTGTCGAAGACTGTGACTCCAAACGTAAATTGGAATTGAATACTACTTCTGATACGATGAAGAAGAGAGATCAATCCGTTCCATGCATATCTGGGAAAAAACTATCCGATgggaaaatattgagaatttatTACACTCCCAAAGAAATCAAGCCTTTTTCTTGCGATATTTGCCAAAAACGCTTCGCCAGACTGCACCACCTGGAAAGTCATAAACGGATCCATACGGGTGAATTGTTCGAATGCCAATGTTGTGGGGAAAAACTCTTAGATAAAGGTTCATGGAGACTTCACCTACTAACGCACAAAGACTATAGACCTTTTCCTTGCGATATTTGCAATAAAAGTTTTTCCAGAGAGCACCACTTGAAGAGTCATATTGTTATCCATACcggtgaaaaaaaatacaaatgccAATATTGTGAGAAGGCCTTCTCGTGGAGTTCGAACAAGAGGACCCACGAAATGACCCACACCGGTCGTAAGCCCCATCGTTGTGATACTTGTCGAAGGAGTTTCAGCGAACTGCAACATCTGAAGGATCATAAACTTAcacatacaggagaaaaaccttACAAATATGTGATTTCACAAGATTTGATTTTCAACCTCCAAAAATCCCGAACCACCAATGGAAAATATACTATATGTCTAAAACACTCTGCTTTCAGATCACTAAAACTCGAATTGAAAGATGTAAAAGTGGAGAATTTAGAAAATGAAGAAGTGAAACCACGTAAACCAAAGAACACAAAAATCCgaaaacaagaaaacaaaaagaaaaaaatcaaacgtAAGAAAGCGGATATACAACATCCTCCACCCATAGACTTAGACGAGCCTATCCAGTGTGACGTATGTAGCGACACCTATAGGAACAATGTTGCATTTTCCCTACATTCCATAAGTCACAGTGATGATGGCAAGTACTCGTGCCACATTTGTAACTATAGGAACGCCTCCAAGTACCATATAGAGATGCACGTTAGAGCCCACGAAGGGACGACCAGTTATAAGTGCGAGATTTGCAGCAAAGCGTTCACGGTCAGTACCCACGCCCTGGAGCACAAGTACTTCCATTCTGGGGAGAAACCTTTCCAGTGCGAGATTTGCGGAAAGCACTTCATGTTTTCCAGATTCCTAGCATCCCATAGGCGTACCCAGCACTGGGAAATAATCACAGGTACGCCGCTGATCAAGTACGACTGTACCATCTGCAAAAAACACTACACGTCGTCCAGCGGTCTCAAGAGACACAACCTGAGGAACCATAATACAGAAGGCATCGATACTTCTGTGCTATGTGACATTTGCGGAAAGAAAATTTCGAGCAACGAGAAACTCAAATTCCACCGTAGGGTACACACAGGGTACAGACCGCACGCTTGCGAAGTTTGCGGGAAATGTTTTTCCACCAAGGAGCAGAAAAAGGAGCACTTGCGGGTGCACACCGGCGAAAAACCGTACATTTGCAAGTTTTGCGGCAAGGGGTTCACTCAGAGATCGCCTCTGAAGATCCACGAGCGCTCCCATACCGGGGAGGCGCCGTATATTTGCGTACTATGTACCAAAGGGTTGGAAAAAACTAGAAAGAAGACTCTCAAGAAACACACGAAACATGATaaatcgaaaaaatcaaaatacaaaaGATCTTCAGAGGAACATCCTCCTCCGCTGAAACTGGAACAACCGATCCAATGCGACGAGTGCGATAGGTGTTTCACCAACAATGTCGACTTTGCCTTGCATTCGAAATCCCACGACAAAGACGGAAAATACAACTGTCACCTCTGCATCAGCTTCCGAAACGCGTCCAAGTACCAAATAGAAATGCACGTCAGAGCTCATGAAGGAACAACCAAATATAAGTGCGAGATATGTAACCAGGGGTTCGCAATCAGTACCCATGCTGCAGAGCACAAGTACTTCCATACCGGCGAGAAACCATTTCAGTGTGAAATTTGCGGAAAACACTTTATGTACTCTTGGTTTTTATCGAGACACAGAAAGTCTTCCCATTACGAAATACTGACGGGAAGTCCTTTGGTCAAGTACGATTGCTCGGTTTGTAACAAGCACTATGCGACAGCTTCCAGCTTGAGCAGACATAAGCTGAGCAAGCACAAGAAAATCGATGGCTCAGTTCTTTGCGACATATGCGGAAAGAGGCTATCCAGCAGAGAAAAGCTCAAGTTCCATCTGCGAACCCACACAGGTTATAAGCCCCACGGTTGTCATCTGTGTCCCAAAAGCTTTTCTAAGAAGGACCAGCTAGTAGAGCACGTGAGGGTACACACTGGAGAAAAACCGTACATATGTAAGTATTGCGGCAGGGGGTTCACACAAAGAACTCCCTTGAAAACCCACGAGAAAACCCATATTCGTGATGAGGCTAACGCCTGCGCTCTCTGCGGAGTCAGTGGGGGTTGCTTGCATCTACCTAGGAAGTTCTCAGAAAGAACAATCATGCACAGAGGTATCATTCCTTGTTCCATGTGTGGGGAACTGGGTCCTTGCCCTCACCTACCGGGGTTACCACTGAACTCATCCAAGGAGGAGGTAAACCCTTGTCCTGTGTGTGGTTCTCTTGTACCTTGTGAACACATGGTGAAGATGAGTATGATGACTCCTTCTCGTGAGGAGATGGCTTCTTGTCATGTATGTGGGGAACTTGGTAGTTGCTCGCACGTGCCGAGGATGCCTTTCAAAACGCCTCTGAGGAGTGAAGTAACTTGTAGCATTTGTGGACAGACTGGATCTTGCGTACATCTCCAGAGTTTATTGACAATGGgttttccatattcctaa
Protein Sequence: MFNVDRLCFRFIKDLTIEDKPLKTGKDELLEVDYPEFITEKAIKNITDPQYICSKSLMCTIPEMEHKHSEAEDGKYFPYSRKKDYYCTPCDKHYKSRGGLRHHNIYEHNLFDTGREATCNVCGKILSCKKELVIHKRTHPGFEGYKPYPCDICESSFNNIHHLKNHKRVHTGEKPFKCQYCGKGFSQQSCIKPHERIHTDSRPYVCEICDKKFTLLRSLVNHLKWIHKKKLSKKIYERKFEQLIIKEELLENVDYPEIIDFETFPYLNSIVEDCVSNTKLELNTTCDKIKEREQSASCISGKKLSDGKIARLHDTRKEIKPFSCDICQKRFARIHNLESHKRIHTGEMIECQCCGEKLLDKSSLRLHLLTHKDYRPFSCDICNKSFHTEHHLKCHNVIHTGEKKYKCQYCGKAFSWSSNKRTHEMAHTGLKPHRCDTCRRSFSELQHLKDHKLTHTGEKPYECQYCEVTFGRRSYIYNHVKKVHNKTHSVLKDNVRIEELIIKEEPLENVDYPEIIHFGTFPYLNSSVEDCDSKRKLELNTTSDTMKKRDQSVPCISGKKLSDGKILRIYYTPKEIKPFSCDICQKRFARLHHLESHKRIHTGELFECQCCGEKLLDKGSWRLHLLTHKDYRPFPCDICNKSFSREHHLKSHIVIHTGEKKYKCQYCEKAFSWSSNKRTHEMTHTGRKPHRCDTCRRSFSELQHLKDHKLTHTGEKPYKYVISQDLIFNLQKSRTTNGKYTICLKHSAFRSLKLELKDVKVENLENEEVKPRKPKNTKIRKQENKKKKIKRKKADIQHPPPIDLDEPIQCDVCSDTYRNNVAFSLHSISHSDDGKYSCHICNYRNASKYHIEMHVRAHEGTTSYKCEICSKAFTVSTHALEHKYFHSGEKPFQCEICGKHFMFSRFLASHRRTQHWEIITGTPLIKYDCTICKKHYTSSSGLKRHNLRNHNTEGIDTSVLCDICGKKISSNEKLKFHRRVHTGYRPHACEVCGKCFSTKEQKKEHLRVHTGEKPYICKFCGKGFTQRSPLKIHERSHTGEAPYICVLCTKGLEKTRKKTLKKHTKHDKSKKSKYKRSSEEHPPPLKLEQPIQCDECDRCFTNNVDFALHSKSHDKDGKYNCHLCISFRNASKYQIEMHVRAHEGTTKYKCEICNQGFAISTHAAEHKYFHTGEKPFQCEICGKHFMYSWFLSRHRKSSHYEILTGSPLVKYDCSVCNKHYATASSLSRHKLSKHKKIDGSVLCDICGKRLSSREKLKFHLRTHTGYKPHGCHLCPKSFSKKDQLVEHVRVHTGEKPYICKYCGRGFTQRTPLKTHEKTHIRDEANACALCGVSGGCLHLPRKFSERTIMHRGIIPCSMCGELGPCPHLPGLPLNSSKEEVNPCPVCGSLVPCEHMVKMSMMTPSREEMASCHVCGELGSCSHVPRMPFKTPLRSEVTCSICGQTGSCVHLQSLLTMGFPYS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -