Gqui032628.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Gonioctena quinquepunctata
Gene Symbol
Rreb1
Assembly
GCA_018342105.1
Location
JAFIRS010000143.1:417210-464118[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 47 0.00013 0.015 16.7 4.3 2 23 18 40 17 40 0.93
2 47 0.00011 0.012 17.0 2.0 2 23 47 69 46 69 0.93
3 47 0.002 0.22 13.1 1.1 1 23 76 99 76 99 0.94
4 47 0.00069 0.079 14.5 3.5 1 23 104 126 104 126 0.98
5 47 0.00011 0.013 16.9 0.1 3 23 165 185 164 185 0.98
6 47 4.7e-05 0.0054 18.2 1.8 1 23 191 213 191 213 0.99
7 47 8.6e-06 0.00099 20.5 0.9 1 23 219 241 219 241 0.97
8 47 0.027 3.1 9.5 0.9 2 21 266 292 265 293 0.83
9 47 0.033 3.8 9.2 1.3 1 23 299 322 299 322 0.93
10 47 0.00033 0.038 15.5 2.5 1 23 356 379 356 379 0.96
11 47 0.00032 0.037 15.5 5.0 1 23 384 406 384 406 0.99
12 47 0.0065 0.75 11.4 1.0 3 23 445 465 444 465 0.97
13 47 7.8e-06 0.00089 20.6 3.5 1 23 471 493 471 493 0.99
14 47 1.3e-06 0.00015 23.1 0.5 1 23 499 521 499 521 0.98
15 47 9.1e-05 0.01 17.3 0.3 2 23 565 587 565 587 0.97
16 47 0.034 3.9 9.2 5.8 1 23 592 615 592 615 0.93
17 47 3.3e-05 0.0038 18.7 4.6 1 23 640 663 640 663 0.96
18 47 7.8e-06 0.0009 20.6 3.9 1 23 668 690 668 690 0.99
19 47 3.5e-06 0.0004 21.7 0.2 2 23 713 735 713 735 0.97
20 47 0.32 37 6.1 0.5 1 23 740 763 740 763 0.90
21 47 5.7e-05 0.0066 17.9 0.2 1 23 769 792 769 792 0.95
22 47 3.2e-05 0.0037 18.7 1.5 1 23 797 820 797 820 0.97
23 47 4.4e-06 0.00051 21.4 3.8 1 23 825 847 825 847 0.99
24 47 6.4e-05 0.0074 17.7 0.9 2 23 867 889 867 889 0.96
25 47 0.018 2.1 10.0 1.8 1 23 894 917 894 917 0.92
26 47 0.0006 0.069 14.7 0.4 2 23 924 946 923 946 0.93
27 47 0.00016 0.018 16.5 1.4 1 23 951 974 951 974 0.96
28 47 7.7e-06 0.00089 20.6 3.8 1 23 979 1001 979 1001 0.99
29 47 4.4e-05 0.0051 18.2 0.1 3 23 1040 1060 1039 1060 0.98
30 47 1.1e-05 0.0013 20.1 2.0 1 23 1066 1088 1066 1088 0.99
31 47 5.1e-06 0.00058 21.2 2.1 1 23 1094 1116 1094 1116 0.97
32 47 0.0012 0.14 13.7 3.0 1 23 1210 1232 1210 1232 0.96
33 47 5.8e-05 0.0067 17.9 0.7 2 23 1238 1260 1237 1260 0.94
34 47 0.00042 0.048 15.2 4.6 1 23 1266 1289 1266 1289 0.97
35 47 1.3e-06 0.00015 23.1 0.6 2 23 1295 1316 1294 1316 0.96
36 47 0.062 7.1 8.3 4.4 2 23 1325 1346 1324 1346 0.96
37 47 4.5e-06 0.00051 21.4 2.1 1 23 1349 1371 1349 1371 0.98
38 47 0.0016 0.19 13.3 0.3 2 23 1390 1411 1389 1411 0.96
39 47 0.02 2.3 9.9 0.5 1 23 1416 1439 1416 1439 0.95
40 47 5.5e-05 0.0063 18.0 0.2 2 23 1450 1472 1449 1472 0.92
41 47 8.7e-05 0.01 17.3 1.0 1 23 1484 1507 1484 1507 0.98
42 47 1.4 1.6e+02 4.1 7.8 1 23 1512 1534 1512 1534 0.95
43 47 0.08 9.2 8.0 1.8 2 23 1544 1565 1543 1565 0.97
44 47 5.5e-06 0.00064 21.1 0.1 1 23 1570 1592 1570 1592 0.99
45 47 7e-06 0.00081 20.8 1.7 1 23 1598 1620 1598 1620 0.99
46 47 5.3e-07 6.1e-05 24.3 0.8 1 23 1626 1648 1626 1648 0.98
47 47 0.18 21 6.9 4.6 1 21 1654 1674 1654 1675 0.94

Sequence Information

Coding Sequence
atgaaatttacTACACCTGAAGAACAACAAAATCGGGCAGAAAGGAAATGTGTATGTGACATCTGTGGCAAAAAATTCGTTCACTCCCATCAACTAACAGCCCACAAGAATCTAGTCCACTTGAAAATGTTAGCTTCAAAGTGCGAAATTTGTGACAAACCGTTTTCCCACAAGAAATCTTTGACATATCACAAGCAAGCTGTGCACCTGAAAACACTGGCAGAATTTTCATGCGACCAGTGTGAGAACACTTTCACTACTAAAAAGTCACTGGAGTTGCATAAGGCGTCACTTCATCTGGCGATTCGACATCAATGCAAAAGTTGCGGCAAAATCTTCAAGAATCTCCAGTATTATAGGATACACGTCAAGATGCATGGAGTTTCCAGTGATGAAAAACGGTACCACTGCAAGATCTGCGTCAAGTCGATGGCGTGCAAGCAGTCTTTCGAATACCACATGAAGAATCACTGGGGAGCCAATAAAAGGATATGTGAAGTTTGTGGGAAATCCCTCTCTGGCGGTGACAGTCTGACCGCTCATATGAGGACCCACACTGGGGAGTCACCTTACCAGTGCGATTTGTGTCCGAAACGTTTTAAAATAAAGAAGAATATGAAGATCCATCGCCGCATTCACACCAAGGAAAAACCTCATGTGTGTGATGTGTGCGGTAAAGCTTTCAACCAAAAAGGCACTTTAATAACGCATAAACGCTTGCACACAGGAGAGAGACCTTATGAGTGCGTGATTTGTTGTAAGAAATTCATTACTAGTACTGTTAAGAAGAATCATAAGTGCAAAAGGAAAACTTCCGTTCGCTCAGATTGCGGAAAAATATTCAGTATCAAGGAGGAGCTGAACGACCAtcacagaaatcctgaaaaaaAGTATTACTTTTGCGATTTATGTGACGAAAAATTCTCGTACGCTTATATGATAACAAGTCACAAAAAATTTGTTCACCTGAAGGTTTCTGAATCCAGATCCAATCTTCGCGACAACGTATTTGCACGAGCTGATAATCAGATCCGTGAAACGAACGTTTTAGATCACGATCTGATTTTTATTTGTGACCAGTGTCATGAAACGTTCTCAACCGAGAAGCAGCTGAAGCTTCACAAAAATTCGATTCATCTGAATATCTGTTATAGATGTGAGCATTGCAGTAAAGAATTCAGGAACCTAGCCCATTACAGGCTGCATTTGGAAACCCACAAAGCTGGCTATATAGGACAAAAACTCCAGTGTACGGAGTGTTTCAAGTTTTTGTCGTGTAAACGCTCTTACGATCGTCATATGGGGAGTCACAATGGTACCGGTACCCGAATGTGCGAAATTTGTGGAAAATCCTTATCCTGTTTCTGGGGCCTTACCGTCCATATGAGGACCCATACTGGGGAAGCACCCTATCAGTGTGACTTTTGCCCTAAACGCTTCACAAGGAAGTTGAATATGAAGAGACATCGACGCATCCACACAAACGAAAAACCTTATGAGTGTGATATATGCGATAAAGCATTCAATCAGAGAACCTCTTTGACGGTCCATAAACGCATTCATACTGGAGAAAGACCCTTTGAGTGTGCGGTTTGTTGTAGAAAGTTTATTACGAGAACTGTGATGAAAAAGCATAAATGTTTCTTCCAGTCTGTTTTTTTGAAACTTCCTTGTAATTTCAGGAAACCTCCCGTTTGTTCAGATTGCGGACAAGCTTTCAGCAGTACAGGAAAGTTGAAGGGCCACATTCGGAGAAATCACAAAGAAAAGAATTATTTTTGCCATTTGTGCAACAAAAAGTTCGCGTACGCTTATTTGATGAATAGGCATAAACATTATGTTCACCTGAAGGTCTCTGAATCCAAATCCGTTCTTCGCGACGAAACAGATACAAACGCTATAGATTACAATTCGATTTTTTGTTGTGACCAGTGTCAAAAAACGTTCACCACCAAGAAGCAGCTGAAGCTTCATATAAATTCGATtcatctgaatatttgttatagaTGTGAGCATTGCGGAAAAGAATTCAGGAACCTAGGCTATTACAGACAACATTTGAAAACCCACAAAGCTGGTTATATACGACAAAAGTACCAGTGTGCAGAGTGTCTCAAGTTCTTAGCGAAACCTCCCGTTTGTTCAGATTGCGGAAAAGCTTTCAGCAGCCCAGAAAAGTTGAAGGGCCATATTCGGAGAAATCACAAAGAAAAGAATTACTCTTGCGATTTGTGCGACAAAAAAATCGCGTACGCTTACATGATGACGAGTCACAAAAGCTTTGTTCACCTGAAGGTCACCGAATTCAAATGCGGTCTTTGCGACAAAATATTTGCCCGTGCTGATAAGCTGAACCAACATACCAACGCGATACATTACAATCTGAAATTTGTTTGTGACCAGTGTCAAGAAACTTTTTCCAGCAAGAATCTGCTGAAGCGTCACAAAAACTCGATCCATCTGAATATTCGTTATAGATGCGAGCATTGCGGCAAAGAATTCAGGAACCAAGCATATTACAGACAACACGTGAAAACCCACGAAGCTGGCTATACAGGACAAAAACTCCAGTGTGCAGAGTGTCTTGCGAAAACTCCCGTATGTTTAGATTGTGGAAAAACTTTCAGCAGCACAAGAAAGTTGAACGGTCATATTCGGAGAAATCACAAAGAAAAGAATTACTCTTGCGATTTGTGCGACAAAAAGTTCACGTACGGTTATATGATGACGAGTCACAAAAACTTTGTTCACCTGAAGCTCTCTGAATCCAAATGCGATCTTTGCGACAAAGTATTTTCCCGAGAGGATTATGCGAATCGTCATAAAAACGCTGTACATTAcaatatgatttatttttgtgACGAGTGTCAAGAAACTTTCTCCACAAAGAATCTGCTGAAACTCCATAAAAACTCGATCCATCTGAATATTCGATATCGATGTGAGCATTGCGGTAAAGAATTCAGGAACCTAGCATATTACAGGCAACATTTGAAAACTCACGAGGCTGGCTACATACGACAAAAACTCCAATGTGCAGAGTGCCTGAAGTTTTTGTCGTGCAGACGCTCTTATGATCGTCACATGAAGAGCCACAATGGGACCGGTACCCGAATTTGCGAGGTTTGTGGAAAAACTTTATCCAGTTTCGGGGGTCTAACAATCCACATGAGAACCCATACAGGGGAAGCACCCTATCAGTGTGATTTGTGCCCCAAACGCTTCAAGAGgaagctaaatatgaaaatacaTCGACGCATCCACACAAATGAAAAACCTCATGAATGTGTTATCTGCGATAAGACATTCAATCAACGATCCACCCTGACGGTCCATAAACGCATTCATACTGGAGAAAGACCGTATGAATGTGTGGTTTGCTGCAAAAAGTTTATTACGAGAACTGTAATGAAAGAGCATAAATTTATTCAGAGTGATGCCAAGGTATGCAACAAAGGGGTAAACGATGGGTTATTGCTTGTGAGGTCATTATGCAATGATAATTTGACTATGATAAAGAAATGTCAAAAGACTAGAAATGAAGATGGCCTGAAATACAAGATATGCCAGAAAGGTTCCACTAATTCGTCGCAAATTAAAAACCAGTATGTCCATCTTCAGAATGTCCACACTTGCCTGACGTGCGGAGAAAGCTTTTTTTCCAAATCAGCTCTCACACTCCATACAAAGTTCCATACTAGTGATTCCTCAGAATGCGATCAATGTCAAAGAAAATTCCGCGACAAGTACCAATTGAAAGTACACATTGAGAACGTCCACTTGAGGAAAATCAACTTTTGTTGCGACCAGTGCGACAGAAAGTTTTATCAACTCTACAAACTCAACACACACATCAAAACCGAACACGAAGGATTCAGATTGCCTTGCACCTTATGTGACAAGTCCTTCAAGGACAGTACCAAGTTGAAGGCTCATATGGAAACCCATGACCATAATCTGAAAGTACAAGTCGAATGCCCCGAGTGCCACAAACTCTACAACAAGCGATATTTAACGCACCATTTGAGGAATAAGCATCAAGGTCACGTTTGTGATGTATGCGGGAAAGCTCTGTCTTCGAAAAGCAGCCTGGACCACCACATGAGGACCCACACAGGCGAAAAACCTTTCAAATGCGACTTATGCGAAAAGAGgTCGGACTCGCTGGAATGTGAAATTTGTGGAAAAATGTTGGGCACTCGAAAATCCTTGAAGGATCACAGCAAGATCCACTGTGGAAAGAGATACGTATGCGACATGTGCGGTAAAGACTTTTTATATCCATACAGGTTGCGGACACACAAAGAAAGAGTCCATCTACACATCAAAAAGAAGTTTCCCGAAGTCCAATGCGACATTTGCGGCAAAAACTTCAACGGTAAATCTCATCTTGCCATTCACATAGGGAACGTTCACTTTGGAAAACTGACAAATGACacgaaaacaaaatttcaatgcCCCATTTGTGAAAAGAATTTCGTCTGCCAATCCCAACTCGATAAACATATAAGAATCATCCACGAAGGTTTCCGGTATAAATGTCCAAATTGCGAAAAAAGTTTCAGGTGCGAGAAGCATTTCCAGTTTCACGTGAAAACTCACGAGCCTGACTATGAAGGTTTCGAAAAGGAGTGCGAAAAATGTTGTATCGTTTTCAAGAGTGAAGGGGGTTACAGGGTCCACATGAAAAAACATGAGGGGCTATCTTACGTGTGTGATATATGTGGTAAAAATGTGACGTCCGTGGGAAGTTTGCAGAACCATATCCGCACCCATACCGGTGAAAAGCCGTACAAATGCGAAGATTGTGGCAAGAATTTCAACTCCACGCAATATCTGGTGAAGCACAAACGCGTTCACACGAAAGAAAAACCGTATGTTTGTGACATTTGCAACCAAAGCTTCACACAAAAATCATCACTGACAGTACACGTCAGGTACCATACCGGAGAAAGACCTCATAAATGCAACGCTTGTTCCAAGCTATTCGTAACGAAAACTTTACTGAAGAATCATAGATGTAAAGCATATTTAGATGAAATTATTTCAGATGACTCTGTAAGTGAGGGAGAATAA
Protein Sequence
MKFTTPEEQQNRAERKCVCDICGKKFVHSHQLTAHKNLVHLKMLASKCEICDKPFSHKKSLTYHKQAVHLKTLAEFSCDQCENTFTTKKSLELHKASLHLAIRHQCKSCGKIFKNLQYYRIHVKMHGVSSDEKRYHCKICVKSMACKQSFEYHMKNHWGANKRICEVCGKSLSGGDSLTAHMRTHTGESPYQCDLCPKRFKIKKNMKIHRRIHTKEKPHVCDVCGKAFNQKGTLITHKRLHTGERPYECVICCKKFITSTVKKNHKCKRKTSVRSDCGKIFSIKEELNDHHRNPEKKYYFCDLCDEKFSYAYMITSHKKFVHLKVSESRSNLRDNVFARADNQIRETNVLDHDLIFICDQCHETFSTEKQLKLHKNSIHLNICYRCEHCSKEFRNLAHYRLHLETHKAGYIGQKLQCTECFKFLSCKRSYDRHMGSHNGTGTRMCEICGKSLSCFWGLTVHMRTHTGEAPYQCDFCPKRFTRKLNMKRHRRIHTNEKPYECDICDKAFNQRTSLTVHKRIHTGERPFECAVCCRKFITRTVMKKHKCFFQSVFLKLPCNFRKPPVCSDCGQAFSSTGKLKGHIRRNHKEKNYFCHLCNKKFAYAYLMNRHKHYVHLKVSESKSVLRDETDTNAIDYNSIFCCDQCQKTFTTKKQLKLHINSIHLNICYRCEHCGKEFRNLGYYRQHLKTHKAGYIRQKYQCAECLKFLAKPPVCSDCGKAFSSPEKLKGHIRRNHKEKNYSCDLCDKKIAYAYMMTSHKSFVHLKVTEFKCGLCDKIFARADKLNQHTNAIHYNLKFVCDQCQETFSSKNLLKRHKNSIHLNIRYRCEHCGKEFRNQAYYRQHVKTHEAGYTGQKLQCAECLAKTPVCLDCGKTFSSTRKLNGHIRRNHKEKNYSCDLCDKKFTYGYMMTSHKNFVHLKLSESKCDLCDKVFSREDYANRHKNAVHYNMIYFCDECQETFSTKNLLKLHKNSIHLNIRYRCEHCGKEFRNLAYYRQHLKTHEAGYIRQKLQCAECLKFLSCRRSYDRHMKSHNGTGTRICEVCGKTLSSFGGLTIHMRTHTGEAPYQCDLCPKRFKRKLNMKIHRRIHTNEKPHECVICDKTFNQRSTLTVHKRIHTGERPYECVVCCKKFITRTVMKEHKFIQSDAKVCNKGVNDGLLLVRSLCNDNLTMIKKCQKTRNEDGLKYKICQKGSTNSSQIKNQYVHLQNVHTCLTCGESFFSKSALTLHTKFHTSDSSECDQCQRKFRDKYQLKVHIENVHLRKINFCCDQCDRKFYQLYKLNTHIKTEHEGFRLPCTLCDKSFKDSTKLKAHMETHDHNLKVQVECPECHKLYNKRYLTHHLRNKHQGHVCDVCGKALSSKSSLDHHMRTHTGEKPFKCDLCEKRSDSLECEICGKMLGTRKSLKDHSKIHCGKRYVCDMCGKDFLYPYRLRTHKERVHLHIKKKFPEVQCDICGKNFNGKSHLAIHIGNVHFGKLTNDTKTKFQCPICEKNFVCQSQLDKHIRIIHEGFRYKCPNCEKSFRCEKHFQFHVKTHEPDYEGFEKECEKCCIVFKSEGGYRVHMKKHEGLSYVCDICGKNVTSVGSLQNHIRTHTGEKPYKCEDCGKNFNSTQYLVKHKRVHTKEKPYVCDICNQSFTQKSSLTVHVRYHTGERPHKCNACSKLFVTKTLLKNHRCKAYLDEIISDDSVSEGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-