Basic Information

Gene Symbol
CAMTA1
Assembly
GCA_018342105.1
Location
JAFIRS010000150.1:423355-1065036[+]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 4.8e-48 1.8e-43 148.0 2.1 2 116 28 141 27 141 0.98
2 3 0.39 1.5e+04 -3.3 0.0 28 64 271 307 265 310 0.76
3 3 0.12 4.4e+03 -1.6 2.6 45 87 1258 1302 1216 1363 0.62

Sequence Information

Coding Sequence
ATGCGAATTGTAAGATACGGCGAGCCCATCAAGCTGCCCGAAAACCTAGAAAGTTTACCCCGAGCTGACCACTTTCCCACGCAGAGGCACCGTTGGAATACGAATGAGGAAATCGCTGCCATCCTTATCAGCTTTGATCGGCACGCGGAATGGCAGAGCAAGGAGGTCAAGATCAGgcCCAAGAGTGGTTCGATGTTGTTATATAGCAGGAAAAAAGTGCGATATCGTAGAGATGGATATTGCTGGAAAAAAAGGAAAGACGGAAAGACTACGAGAGAGGATCATATGAAACTGAAGGTTCAAGGGACAGAGTGCATATACGGATGTTATGTCCACTCAGCAATTTTACCAACGTTCCATCGAAGGTGCTATTGGCTTCTTCAGGTaAATCCAGACATCGTTTTGGTTCACTATCTCAACGTCCCTTATCCGGATGATAACAAATTGGCCGTCATAACTCCGAGTTTGGCCCTTTGGGCCGACAAAAAAGAATGGACGAAGGACGAACTGGTGTCCCAGTTGAAGCCGATGTTTTTCAGCGAAGACGAGCCCGATATCAACAACGAACTGGAAATATCGACAGCAGAAACTGTGGAAGCAATAGTGAGTCAACTGATGGAAAAACAACGGGTGGCCCGACAAGCCGCGTTGGTCAAACAATTGGAGTGCGGATGTCCGGACTCAACTTGTGCCGACGGCAAGAGCTGCTCGCATCCCATGAGGAGGATAACTTCCGCCAAAGACATGGCCAGTTCGCCATTGGCCAGTTCCAGCGCCAATTCTCGTCCTCCTAGCAATTCAGACAACAATAATCAGGTATCATCAACAACAGGATCGGGCACTATGTTGCTGACCAATAACAATTCTCCAAGAGTGTATTCCAGAGAATCGAGAAACCACCAACTAACTCAGAACAACAGCAACTGCTCCTCAAGTTCTGGAAACACCCCTCCACTAGTTCTGAGTCTCTCCCAGATCCAGGGCAGTGGTGGGCTACTCATTCTCAACAGCGGCAACTCTGGCAACAATGCTGGTCACCAAAATTTGAGTAATCCCGTGTCTGTGGCTAACTTCGTCTGCAATACGAATCGGGGGATTTCCAAAGATAGATCCGGTCATCTGGTGCTGAAGCAAGAGGTCATGGACACGAATCCGTCCTCTTGTCTGCACACTGCCAAGCAGAATTCCAAGTCCGGGCAGAGGGAAATGAAAATGGAGCTCAGCGAGAACCACAGACAATCAATTTTCAATGACGGGACGATGTACACTAGTTCGACCCCGAGaaatcCACATCAGCAAACGGAGGTGATAATGTCCAGTGCTCCGTCGACCCCTTCGAAGCACATGGACACCAGTCAAGAAGAAGTCATCGAAGACTATAAACATCAAAGCTTCTGTGGCGAAACGGTTGTTCTACTGGGAACTGATTCAAGCGGTTCTCTGGTGAGCAAAAGCGACGGTTCTTCCATTATAAACGGCGGGTTCTTCAACGAAACGTTGGACTTGTCCCAGGAGGACATCCAAAGGACCCTCTCGGCCAATATGCCCTTGTGTTCATCTGAACTAGATAATCATCGAAGACACAACTCCGATTCTAATAACGCCAACCACCAGAACAAGGCGCAGTCTCAACAGCAGAATCTGACCACGGAGATCAATCCCATGGATTTCATAGATAGCTGCGACGTGGTAGTTTCTCCCACTCACGTCGTCGACGATGACGTTTTCGTCAATCTAGATGCGTTCGACATGCTTGGCGAATTCCCAGACCTGGAAGCGTTAGATTCCAGCCACGCTGGACTACTAGAAGTCAATCCGTCCGAAAATAGAACTAATACGAAAGCACAAATAGAACACCATCAGAATAACCATTCGTTAGAAGGGTCGGCGAAAATCACCGACTATTCTCCGGAATGGGCATATCCAGAAGGAGGAGTGAAGGTTTTGGTTACTGGACCATGGCATTCATCCGGACCTTACACCGTACTTTTTGATACATTCCCTGTACCCACTACTTTAGTACAAAGTGGTGTCTTACGTTGTTATTGTCCAGCTCATGAAGCTGGATTGGCAACTTTGCAAGTAGCATGTGATGGCTATGTGATTTCCAACTCTGTGATATTTGAGTATAAGCTTCCACCTAGAGAAGAACACGTGGCTGCTCCCGAACCCAAAGTAGAAAGATGCAACGACAATTTACTTAAATTCACGCTCCTCCAAAGGCTCGAAGCGATGGATGACAGATTGCAAATCAAACAGGAGCCTTCAGATGGCGATGTGGTTGAGGACACGGCCCTATTTGTACAACCAAATTTTGAGGACAGGCTAGTTAACTTTTGCCAAAATATGACTTCGAGAATATGGAGGCAAGGAGAAGAATTGAGTGTCTCTTGGTTTGCTAGCCATAGGGGAATGACACTCTTACATCTTGCAGCTTCTTTGGGGTATTCACGTTTGGTCTGTGCAATGCTCCACTGGAGGGCCGAGAATTCTTCTCTGCTTCTGGAAACTGAAGTTGATGCTCTGAGTCAAGACGAAGACGGTTTCACTGCTCTGATGTGGGCGTGTGCCAGAGGCCATACTGAAACAGCGGTGATGCTTTATAAATGGAACCATTTGGCTTTGAGTATGAAGAATACAACAAATCAAACAGCATTGGAATGTGCTCGAGCTAATAATAATTTTGATCTTGTAAAAGAATTGGAAAAACTTGAATTGCGGAGAGATAAAGCAAACATGCTTTTACAGTCTAATCAGTCTTCCACAGATGCTGCTCCTTCCCCTACTGCCATCTCCCCTGCAAGTTCTGTGGCTTCTCTCGCATCGATAGCTTCAACTAGCAAATCACATGATGGAGTCTTCTTGAGACCTGGTGCTGTCACAAGGAGTGAagcgaataaatataaaatcCTGAACGTAGATTTAGATTTGGATAGCAACAAATTCATCATGTCTTCTCCTAGTCCTCTACTGTCAGACTTCTCATCTAGTACTAGAGGTAGTAATGGACAGAAGCTGATAAAACGACCATCAATCGACAGTGGTATCCATATGTCTTGCGGTCCAGCTGCAGAGAGTTATAGGCCTAAAAGCTCCAAAGTTCATAATGTTCGGGAACTCCCAAAATTATCCAAATTCGACAGAAGCATGTCCCTACCATTGAACTCACCATCTACCAAAGACAATTCCCTGGACGGTACAGATTTCCACAGAAAAATGGACTTTGCCCTATGGGAACAAGACGCGAGAGTTTTGACCTTGGCAGAACAGATCATTGCTGCTATGCCTGATCGAATTAAGaatGAAAGTGAAGAAATGATGTTGGATAAAAGTCCTGGCGTCCCAGTCAAAGACACTCTATCAGATATGTTCATGGAACCCCTATTAGATCAATCATCTTCCAGTTTCGAATCAGCAGAGTTCAGTTTTGAATTTTCCGATCATAATTACAGATACTATGATCTTGGTACACCATGTTCAAGTTTGAGCCCAGCTTCATCAAGTTGTTTGCCTTCACCTTGCTCTTTCACATTGGATTCGCCATCGCCTCCCCCAACTACTGCAGATTTCTGTGAATTCTTCCAAGCTTCTGGGACCGTTTTTGAGAGGGACTTCTCAAACTTGACATTATCAGATCGTGAGCAACGAGAACTGTATGAGGCAGCAAAAATCATCCAGAAAGCCTATCGTTCTTACAAAGGTCGTCAACAACAAGAACAGGACAAAGAACGCGCCGCCGCTGTAGTAATACAGAACTACTATAGAAGATACAAGCAGTATGCCTATTATAAACAGATGACCCATGCCGCGATGGTCATCCAAAATGGATATAGGTCTTATTGTGAACATAAAAGGTTTAAGAAAAGCCAAGAGGCTGCGGTGTGCATTCAAAATTATTACCGTAATTACAAGGAGCAGGGGGGAAGAAGTAGCAGGGAGGGGACCCCTGCCTCGGCGGGGCTCAAGCGTACATACTCGCAAAGACGTCAGCACCAAGCAGCTAGAAAGATTCAACAATTCATGCGGCAATCGAAGAATAAATTACAGAGAGAACGAGCAGAAAAAGAGAAGCAGGGGGGCCAGTCGGTGGATGCCCATCGAAGGTCACAGTTTCCAGGGGGATCTTCCAATTACATAGGCCCAAATAGCAGATCATATAATATAGACTTCAAAGAAGACTCAAGAAAAGGAAACGATAAGAAGTGA
Protein Sequence
MRIVRYGEPIKLPENLESLPRADHFPTQRHRWNTNEEIAAILISFDRHAEWQSKEVKIRPKSGSMLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQVNPDIVLVHYLNVPYPDDNKLAVITPSLALWADKKEWTKDELVSQLKPMFFSEDEPDINNELEISTAETVEAIVSQLMEKQRVARQAALVKQLECGCPDSTCADGKSCSHPMRRITSAKDMASSPLASSSANSRPPSNSDNNNQVSSTTGSGTMLLTNNNSPRVYSRESRNHQLTQNNSNCSSSSGNTPPLVLSLSQIQGSGGLLILNSGNSGNNAGHQNLSNPVSVANFVCNTNRGISKDRSGHLVLKQEVMDTNPSSCLHTAKQNSKSGQREMKMELSENHRQSIFNDGTMYTSSTPRNPHQQTEVIMSSAPSTPSKHMDTSQEEVIEDYKHQSFCGETVVLLGTDSSGSLVSKSDGSSIINGGFFNETLDLSQEDIQRTLSANMPLCSSELDNHRRHNSDSNNANHQNKAQSQQQNLTTEINPMDFIDSCDVVVSPTHVVDDDVFVNLDAFDMLGEFPDLEALDSSHAGLLEVNPSENRTNTKAQIEHHQNNHSLEGSAKITDYSPEWAYPEGGVKVLVTGPWHSSGPYTVLFDTFPVPTTLVQSGVLRCYCPAHEAGLATLQVACDGYVISNSVIFEYKLPPREEHVAAPEPKVERCNDNLLKFTLLQRLEAMDDRLQIKQEPSDGDVVEDTALFVQPNFEDRLVNFCQNMTSRIWRQGEELSVSWFASHRGMTLLHLAASLGYSRLVCAMLHWRAENSSLLLETEVDALSQDEDGFTALMWACARGHTETAVMLYKWNHLALSMKNTTNQTALECARANNNFDLVKELEKLELRRDKANMLLQSNQSSTDAAPSPTAISPASSVASLASIASTSKSHDGVFLRPGAVTRSEANKYKILNVDLDLDSNKFIMSSPSPLLSDFSSSTRGSNGQKLIKRPSIDSGIHMSCGPAAESYRPKSSKVHNVRELPKLSKFDRSMSLPLNSPSTKDNSLDGTDFHRKMDFALWEQDARVLTLAEQIIAAMPDRIKNESEEMMLDKSPGVPVKDTLSDMFMEPLLDQSSSSFESAEFSFEFSDHNYRYYDLGTPCSSLSPASSSCLPSPCSFTLDSPSPPPTTADFCEFFQASGTVFERDFSNLTLSDREQRELYEAAKIIQKAYRSYKGRQQQEQDKERAAAVVIQNYYRRYKQYAYYKQMTHAAMVIQNGYRSYCEHKRFKKSQEAAVCIQNYYRNYKEQGGRSSREGTPASAGLKRTYSQRRQHQAARKIQQFMRQSKNKLQRERAEKEKQGGQSVDAHRRSQFPGGSSNYIGPNSRSYNIDFKEDSRKGNDKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01289983;
90% Identity
-
80% Identity
-