Basic Information

Gene Symbol
Ncor1_1
Assembly
GCA_018342105.1
Location
JAFIRS010000316.1:205229-504543[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.7e-08 0.00025 22.2 0.0 3 43 468 508 467 511 0.96
2 2 5.7e-05 0.14 13.3 0.1 3 39 952 987 951 990 0.86

Sequence Information

Coding Sequence
ATGGAAATTCATTCCATGAGGATTGATCATGGGGCAGTTCAGACTAATACAATGTCATTTCCTCAAAGGCAAACTCAAAATCATAGaccGAATCACAACCAAACACAACACGCCAGCGTCGCCGACATCTACAAGCCGTCCAGATCTCCGATATCGACGGCTCGCTACCCGTATCCCTCGTCTCCGCACCAACAGCAACCGACGGCCACCGCGGCGAGTATCAACCCTGTCGCCCAGAGGTATCCCcaacagcagcagcagcagcaaccCCAACAGCCTCCGCCCGTGGTTGTTTCAAGCGCGCCTCCCCTCCACTCCAGCGGCGGCGTGTTCCGCGACTACAGGCAGAACCGGATATCGCTGCTGCATCCGGAATATGGGCCGGGGGGCAGGGCGCGAGAGGCGATGCCGGCCGGTTGCGTCCAGCAGCAGCCGCCTTCGGGGGTGGTGTGTATCGACGGCGGAGGACACCAGGGCGGCGGGGGGCAGCAACCGCTGAAGAAGATGCGATTGCAGGATAAGGAGGGCGTGCAGCCGCTCAGGATTGATACACGGGAACAGCCGGGAACGTACATCCCGCAAGTGGAGGCTATTTCACCCACCCTGCCTGATCAGCTGACGCAGGATGACCAAGCGTTCCGAACGACCAAGGACGAGCTCATCCAGCAGATCGGCAAGGTGGACAGAGAGATTGCGAAGGCTGAGTCGCAGATAGCGATACTGAAGAAGAAACAGGCCGAGCTGGAAGAGATTGCCATTAAGCCCGCCATCAAGTCTGAAGTCGAGGAAGTTACGGCTCCCAAACATCAGAGTTTGCCGCAGaaAATTTACGCGGAGAATAGGAAAAAGGCCCAGAATGCTCACGCCCAACTTGACACACTGGGCCCAAAAGTGGAATGGCCATTATACAATCAACCCAGTGATGCACCCATATACCAAGAAAACAAAAGAAAGCACATGGCATTCAAAAGAAGGTTGTTGGATTACTTCAAGCAGAGGCACACTGAAAAAGAGTCGAGGAACAACTTTTTGACTGAAACTTACAGCAAAATGATGCAAGATTGGTTGAGGAAGGTCGATAAAATAGAATCAAGTACAAAAAGAAAGGCGAAAGAAGCTAAGAATAGGGAATTTTTTGAGAAGGTTTTTCCGGAATTGAGGAAGCAGAGAGAAGATAAAGAAAGATTCAATAGGGTGGGATCTCGGGTCAAATCCGAATTGGATATGGAAGAAATCATGGATAATCTTCAAGAACAGGCTTTAGAAGATAAAAAGATGCGTAGCTACGCCGTTATACCGCCTATTCTCTTTGATCAGAAGTCGAAGAAAATCAAGTATGACAACAACAATGGCTACATTGAAGACATGGAGGTGGTCTATAAGAGCAGGCAGTTTTTGAATGTGTGGACTCCCAGTGAAAAAGACGTATTCAAAGAGAAATACCTTCAGCATCCGAAAAATTTCGGTGTTATAGCGTCATATTTAGATAGGAAATCTGTGTCTGATTGTGTACAGTACTATTATTTgactaaaaaaactgaaaactatAAGCAATTGTTCAGGAAGGCGAGGCAGAGATCGAGGACTTCGAGGAATAACACGCAGAAAGTTAACAGCAGCGCCAATTCTTCTGTGGTGGACATTCTGAGTTCAGGTGTGACAACACGACTCCAAAGAGAACAACAGGCCAGAACGGGTGGACAACCATCCAGAGACTCCCAACCTCTAGAACACCCGACCTCGACAACACCTCCAGCTACTTCGGCAGCTACTCCACTGATGACTACATCTGTCGATAGTCCTTCGTCGACCAGTTCAACCACAACAACTACAACTAATTGCGGTTTGACGCCAATAAGTTCCGTCTTGACTTCAACAAACTCCATTTTGTCACCGATACCATCATCATCAGGTGTCACGGCGTCGGATAAAAGTAACGCGTGCGGTGGTGGGAGTGTAACGTCTGTAGTTATGTCGGGAGTGACTACTCCGACCACCGCGATATCAAACTGTATATCTTCTAGTACTTCTGTGATTTCGACTAGTAGTAGTGGCGGAACTACGGTGGGTACGACGTCGACTACACCGTCCGTAGTTGTTTCGGCTTCAGTGACTGTGACAACAATGAACGACAAAGAATCGACGACGACCGACGTGCCCATGGAGGATGTAAAACCAAAGACTTTTCTGGGGTTTGGTTCAATGGACGAGTATGTGTTGAAGAGCAGTTATTTTGGTGAGGGGGACGGTAACGGTAAAGAGGGTGCAGGAGGAGGGGTGATTCACGATGGTCAGAAACAGAGTATGCTGGTGGATGGAACGACGTCTGTTAAAAAAGAGGTCGAGTCGTCCCAGGAATTTGTCAGtgaTCAGAACATGACACCTAATACCACACCGTTGAGTGAGAACAAAAAGAAGAAAGAGAGAAGAAAAGAAAAAGACGCTCCATTGGAGAGTAGCGATGAAGAAGCTAACAATGGACAAGAAAAGACAGTTCAAGGAAATTGTGTCGTTTGCCAGGCTCAGCTCAGTCCTAAACTCCATTCCAGACCACTGGGCCCCAGCCAGGCGTCTCTATATGGTCTACGCGAGGACCAAGTACCGCCAAATTCCCGAGTATGTAACACTTGCCGTTGCAAGTCAGTGCGGTCACGCTATACCCATTGTCCTATTCCTTCATGTCCCAATTCGAGGGGTAGGGTGAAGAGGTTGAGGTCCTTTCCCTACAGATTGCAAGACCTACCTTCTGATGCTAGAGACCCTCTCTTGGCCGAGTTTCGAATCCCCAGCGGGATAACCAAGTGTTGTTCGGCATGTTTCAATAGAATTCAGCGTCGATTGGGTCCGGTGGAAGATTGGCCCGAAGAAGATTTCAACAAACTCAAAACTGCTCTCAGCGAACTCGGCTCCAACTGGCAATTGATCGGCGAAAGATTGAACAAACCCCCGCAGAAAGTCAAAATGTTTTGTGCCGCCAACCGAAAGAGACTCAAAGGTTGTCTGGGAGAAGATCGCAAACCCGCTTTGTCTACAGATGAAGAGAGCGGATCAAGCACTTCCAGTTGTGAAGAATCGATGATAGATGGAGATCGGCATTCTAGTGATACAGCTAGTGCAGGAGAAAGTCCTTCGGTTCAGGGCTCAAACGATAATGCGGCCAAAAGAGTCGATTATGACTCAAGTGCCACAGAAACGGCTGATGAAGCTCAGACTCCTGATCAGTATCAGGGATCTGCTACAATTACACCCGTTATTAATGACGGTCAGCCCAGACAGAATACTTCGCCTCTCAGCGTCAAGGATCTCGTGTTGAATGTGATAGAGTTTTCTCTTATGAAGAATACAGGGGCACAGCCGCAAACACAGAATCCGCCGACGAGCGGGATAACCCCTACCATTTCATCGATATTGAATAATGACTCCAATGAGGTGACGATCGTGAGCGAATATAATCTTATTAGCAACCAACAAAGACCCCAGTCGCAACAACAACGTTCCGACCTCAATCTCGCAAAATTAGTTACACCTTTGATTGGGGCAACTATTACACCAGTTTCGGGGCCGATACAATCACAGCCCCCTCCAGAACCTGTACCATCTTCTAGAGATGATCTTATTGTCTTGCAGGTTCCAGATGGAAGGGAACCAGAAACTTTAGATCTTAGCTTGAAGAAACCCAGAGAGCTACCGCCACCAGCTCCAAGTAAACATCAACCAATGCAACAGCAACAACCTCCAATTCATCGTTCTGAAGCTTACATTTTTCATCAAGAAAGAAAGAGTCCTCTTTTCCCAATAAGACCGCAACAACCCAAACTACCAAGTCCCAAACCGGCCAATCCAAAATCCGGCTCTATCACCTTGGGTACTCCTATTATGTCTCAGACTAGGTATGAAGTACTAAGGCAGATACCAGAAGGCAAGATGGGATCTATAACTCAAGGTACACCGGTGATACCTCATAACATGCAAGACAAACGAGTCTATGACTATTTCAACAAGAGAGGGCCTATGCCAACACAGCCGAGCCAATCACAACAGATGCAATATCCTGGCCAAAGATACGGCCAACAACCCGCTTATACAGTAGAACAACAGTTGAGCTCCAGACAAATAATTATGAATGATTATATAACGTCTCAGCAAATGCTGGGTAGAAGAAACGAAAAGCCTCAATATTATCCTCCTAGCTCTCCTCATCGTACACCGCCACCCCAGCCTGGACAACAACAGAGACAAGGTGTTATACAGCGTCTTACTAGACCACAATACCATCAACCTGGTCACGAAGCTTTGTCCTCGCTAGTTGATGTTGCTGTGCAACAACCCTCTCTACCGGTACCGAGTGCTCCTCACGAAGGCCTCGGCAAAACGATGGCTGACAATATCCTGGAACAGCCACATAGATATCAAATTATCCAGCAGCAGCAACATCAACAACATATGAGACAGCAACAGCATAGAATGGACGAACAGAGGCGCGCAGTGTTTCACCAACAACAAGTTCAACAACAACACCAGCAGCAACAGCAGCAACAACAGCAAGCACAACAACAGCAAGCACAGCAACAGCAGCAGCAGCAAGTGCAACAACAGCAGCAGGTTAGGCAACAAACTCGTGCAGATAATAGTACACTAACTGCTGCTAGTTTGATAGATGCTATCATAACTCATCAGATCAATCAGACGGCCGAAGGTGGGAGAGAAGTGGTTACTAACGCACGGGAACAGAGAGCAGGTGATCTGCTGTTCCAAAAGTTTCACAGAGGTGAACCACCTCCACAGCAAGGCCAAGATAATGGTGATCGACCACCCTCTGTTATAAGTGTTGATCTTGATGGAGATTCTGTCAACAAAAATTTGACTGTCAAAGAACTCACGGATTCGGTTATTAGTCATGATTTCAGTTCTCGACAGACTAATTATTATCACTTGCAAGAAAACATGAATGAGCAGTGGAAAAGGAGGATCCAACAACAACAACACAATGAAGATAAACGTTCCCAAACGCCCCTGCAAGATGAAAGGCAAATTATTCGAATAGCACAGCCCCAACAGAAATATCACATAGAAAGGGTGGAGCCTGTTTCACCACCAGAAAATAACCATTGGTCTGAACAGAATTATAGAAGATACCCTCAGAGTCAACCTCACATTTCTCCATTAGACTATGTGAAAAACAGAATTGTGGAGGTCATGAGAACTGAAGATGATAAGAAAGAGTCTCAAGACTGTTCTCATTCACAAGAGAAAGATCGTAGTGATAGTCCTGGGGATATGGTGATTGATGAGGAGAAACACGAAAACGATTTTGGGCAACAACAACCCACCTCCCAACAGCAAGGTGGTTTTTATTCATTCGTTCACAAAGACTCCACTGCCAATGATAGTTCAAGAAATAATGAGCCGAAACCTCTATTGAGTGCGCAGTATGAACCGTTGTCTGATGAAGATTAA
Protein Sequence
MEIHSMRIDHGAVQTNTMSFPQRQTQNHRPNHNQTQHASVADIYKPSRSPISTARYPYPSSPHQQQPTATAASINPVAQRYPQQQQQQQPQQPPPVVVSSAPPLHSSGGVFRDYRQNRISLLHPEYGPGGRAREAMPAGCVQQQPPSGVVCIDGGGHQGGGGQQPLKKMRLQDKEGVQPLRIDTREQPGTYIPQVEAISPTLPDQLTQDDQAFRTTKDELIQQIGKVDREIAKAESQIAILKKKQAELEEIAIKPAIKSEVEEVTAPKHQSLPQKIYAENRKKAQNAHAQLDTLGPKVEWPLYNQPSDAPIYQENKRKHMAFKRRLLDYFKQRHTEKESRNNFLTETYSKMMQDWLRKVDKIESSTKRKAKEAKNREFFEKVFPELRKQREDKERFNRVGSRVKSELDMEEIMDNLQEQALEDKKMRSYAVIPPILFDQKSKKIKYDNNNGYIEDMEVVYKSRQFLNVWTPSEKDVFKEKYLQHPKNFGVIASYLDRKSVSDCVQYYYLTKKTENYKQLFRKARQRSRTSRNNTQKVNSSANSSVVDILSSGVTTRLQREQQARTGGQPSRDSQPLEHPTSTTPPATSAATPLMTTSVDSPSSTSSTTTTTTNCGLTPISSVLTSTNSILSPIPSSSGVTASDKSNACGGGSVTSVVMSGVTTPTTAISNCISSSTSVISTSSSGGTTVGTTSTTPSVVVSASVTVTTMNDKESTTTDVPMEDVKPKTFLGFGSMDEYVLKSSYFGEGDGNGKEGAGGGVIHDGQKQSMLVDGTTSVKKEVESSQEFVSDQNMTPNTTPLSENKKKKERRKEKDAPLESSDEEANNGQEKTVQGNCVVCQAQLSPKLHSRPLGPSQASLYGLREDQVPPNSRVCNTCRCKSVRSRYTHCPIPSCPNSRGRVKRLRSFPYRLQDLPSDARDPLLAEFRIPSGITKCCSACFNRIQRRLGPVEDWPEEDFNKLKTALSELGSNWQLIGERLNKPPQKVKMFCAANRKRLKGCLGEDRKPALSTDEESGSSTSSCEESMIDGDRHSSDTASAGESPSVQGSNDNAAKRVDYDSSATETADEAQTPDQYQGSATITPVINDGQPRQNTSPLSVKDLVLNVIEFSLMKNTGAQPQTQNPPTSGITPTISSILNNDSNEVTIVSEYNLISNQQRPQSQQQRSDLNLAKLVTPLIGATITPVSGPIQSQPPPEPVPSSRDDLIVLQVPDGREPETLDLSLKKPRELPPPAPSKHQPMQQQQPPIHRSEAYIFHQERKSPLFPIRPQQPKLPSPKPANPKSGSITLGTPIMSQTRYEVLRQIPEGKMGSITQGTPVIPHNMQDKRVYDYFNKRGPMPTQPSQSQQMQYPGQRYGQQPAYTVEQQLSSRQIIMNDYITSQQMLGRRNEKPQYYPPSSPHRTPPPQPGQQQRQGVIQRLTRPQYHQPGHEALSSLVDVAVQQPSLPVPSAPHEGLGKTMADNILEQPHRYQIIQQQQHQQHMRQQQHRMDEQRRAVFHQQQVQQQHQQQQQQQQQAQQQQAQQQQQQQVQQQQQVRQQTRADNSTLTAASLIDAIITHQINQTAEGGREVVTNAREQRAGDLLFQKFHRGEPPPQQGQDNGDRPPSVISVDLDGDSVNKNLTVKELTDSVISHDFSSRQTNYYHLQENMNEQWKRRIQQQQHNEDKRSQTPLQDERQIIRIAQPQQKYHIERVEPVSPPENNHWSEQNYRRYPQSQPHISPLDYVKNRIVEVMRTEDDKKESQDCSHSQEKDRSDSPGDMVIDEEKHENDFGQQQPTSQQQGGFYSFVHKDSTANDSSRNNEPKPLLSAQYEPLSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-