Gqui000945.1
Basic Information
- Insect
- Gonioctena quinquepunctata
- Gene Symbol
- XYLB
- Assembly
- GCA_018342105.1
- Location
- JAFIRS010005908.1:38596-42708[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-09 4e-07 30.7 0.0 3 37 153 188 151 194 0.88
Sequence Information
- Coding Sequence
- ATGTTCCAAATCTTCAAGAACGGTTCCTTAACGAGGGAGAGAGTGAGGAATGCTTGTGCTGATGGTTCATGGGAAATCTTCAATCAGCTATTGGAAAGCACTCCAAGGGGAAACTTTGGAAACTTAGGATTATATTACGACATACAAGAGATAATCCCATTTCTACGGGGAGATTACAGATACAACAAGGCAGGAAATATCTGTAAATTCACGAGTTTAGAAGTTGAGGTGAGAGCTTGTATAGAAGGACAGTGCCTACGAAATAGGGCATATGCTGAAGACTTCGGATTGAAAGTTGatAAAAATACCAAAATTCTGGCAACTGGCGGAGCTTCGCAGAATAAATCGATTCTTCAAGTTTTGGCTGACGTTTTCAATGCTCCTGTATATGTGCAGtggaATGTGGCAATGGTTCAAAAAAGGCAACGCCCTACTACACAGCAGACATGGAGTGCTGAGAATATGCTCAGAGCTATAGAAGCAGTGAAAAATCATGGGATATGTTTCAAAACAGCTAGTAGAAAGTACAACGTACCACGTACTACATTAAAACGAAGAATTTTAAATGTCAATGAAGATGCTGCaggtactgaaaaaaaaatgttgggtGCTAATAGACCAGTATTAACAAAGATCAAGGAGGGGAATAGGTAA
- Protein Sequence
- MFQIFKNGSLTRERVRNACADGSWEIFNQLLESTPRGNFGNLGLYYDIQEIIPFLRGDYRYNKAGNICKFTSLEVEVRACIEGQCLRNRAYAEDFGLKVDKNTKILATGGASQNKSILQVLADVFNAPVYVQWNVAMVQKRQRPTTQQTWSAENMLRAIEAVKNHGICFKTASRKYNVPRTTLKRRILNVNEDAAGTEKKMLGANRPVLTKIKEGNR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00755448;
- 90% Identity
- -
- 80% Identity
- -