Gqui015027.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Gonioctena quinquepunctata
Gene Symbol
ARID5B
Assembly
GCA_018342105.1
Location
JAFIRS010003600.1:20562-85125[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.3 2.9e+04 -3.4 0.0 34 48 182 196 180 201 0.77
2 2 5.9e-25 3.2e-21 76.6 0.0 2 89 290 375 289 375 0.94

Sequence Information

Coding Sequence
ATGTCTGACCAAACTATTGAGCAAACTCTCATGAGAATGTTTAAATCATCTGGAGGGTTAACACACGGGCGTAGTATCTCTGAGAGCACGTTGGCATCATGGACTCTTGGAATGATACGCTTACAAGATGTTTGCGAGCAGATTACAGAATACTGTAACATCactctggatacttcagaacagCACGTAGATTACAGAGATGCACGTgatGAGGTGTTAGCAATTTCGGAAAAAGTTGTAATACGGGTGGAAGACCTCATAACTTGGATTATCGTTGAAGCAGAGTGGACGTGGGGAAGATTGGCCAAATGCGAAGGGGAAGTTGAAGCTGTGGACACATTAGAAAGCGTTCCACCAAGAAAAGCAACAGGCTTGAGTTTCACATCGATCGACAGTGGTTTAGATTTTTACGACGTTGAAAATGAACGAAAAAATCTAGATAGCTACAAAAATGAGAAAGGACCTCATGTTGTGATATTGAGTTTTCCAAAGTACTGCCGCTACAGAGGCATGATGAAGAGGCTTGAAGGCGTGGAGGATGTCTATCTGAAATACAAAATAGTGAATGCGCTAGGAGGTTTCTATGTGATACACCCCAATACAAGAGTGCTCTTCTGCAAGGACACCTTCGATTATCCCGAACTGGAAGGGCACGAACTGTTGTGTAATCATTTAACGCCGAAGTTAAAGGGTCGACCGAGGGGAAAACGAAAAAAACGGAGCGTTTCTCCGGGTTCGGAGAGTAACGAATCGGAGTCTTCGCACTCGACCAATAATCTCAATACTAGAGGCGAAAGCAAAGATGGTTTACGGTGTGAATCTGGTGCTGCCCCTCGTCGTAGTACACGTTGTCATGAAAATAATGAGAACAAGGATTTTTTACGGAAACTTGGTTCTTTTATGAAATCTAATCGTACGCCAATCGGCAGAATTCCATCTTTGGGCTATAAAGAGCttaatcTCTATGAATTCTACACCAAAGTACAAAAACTAGGCGGATATGACTGTGTCACCGGAAatagattatggaaaacaattttcGACGATATGAGTGGACACCAGAATAGTACAAGCGCTGCTACGGTGATACGGCGTCATTATGAAaggttTCTATTATCTTACGAACGTCACATCCGAGGAGAGGAGTATAAACCTTTACCTATATCAGAAAGAAGAAGGCTCAAAAGCAAAAGAGGATGTAACAGTATGAGTGACCCAGAGTCCAGCAGTTGTGATAATATTGCAGCAGCGACCACATCCAAGAAATCATTGACAGCCATAGCTTCATCCGAAAATAAGgaaattaaaACTGAAGGAAAAACTTCTTCGCTAAGAAGTGTCCGAGTGAAATCAGATCGTCAAAAAGACAAACAAATCCAAAGTGAGAAACATAGtctccaaaataataataataacaagtATAATAGTGAAAACTGGCAGCCCACCACCAATACTTATAGTGAAATCTCCAGCCCAGAGATAAAACCTAAAATTGATAAATTAATCATGAAAACAGAAAGTATGACTGTTAAAACTGAACTCTCAACTGTCATCACTCAGAGTAAACCTGTTAAAATAGAGTATGCTACTGTTAAAAGTGAGTGCTCTGCTAAAAACGACGCCCCGTTAATTGATTCTACAAATAAGACAAATTTAAATGGGAATTTTCCTGTTAAAATTTCAGTGAAAATTGAAACTAATCTGGTAAAAACTGAAAGAAGTCCTGTGAAAGTTGAAGAAAGttcatttgtcaaaattgaaaatttggctAGCTCATCGGTAAAAATAGAACCGGCGCCTATTAAAATAGAAAAGAATTCCACTCCTCCCGTGAAATCAGAACCACTTACGATGAGTCTAGAAAGAGTGAAAAAAGAAGTGACGGAGACAAAGGAGGATACCATTTCCATTAAAACAGAATCAGTTGTATGTCCAGTCACCACAGCGGCAACAACAGTTTCAGTGGGTGTGGTTATGCCTCCTGTTGAAGGAAAGGAAAACATACCACTCATCACAACCGATGAAGGAAGTGCAAAAAGCAATCTGGAAGTTATTGAAGGTCTATTCAAACCCCAAATCTCAGAGATAATAGAGGAAACTGATACATTTCGCAACAATTTTTCACAAGAAGTTAAAAAAAGAAAACTGGACATTTTGAAAGAGGGAGGACTTGAAGTTACTCCAGTTAGACCATTATCGATGAGTTCTACAAAAGATGGACGCCCTTCAGTCATTCATCAGACAATGCCTGTACAAATGGTGCCCAAACCTGGAAAAATAGAAGTGATGCCACCACCAACAAGCACAGCTCCCCAGAAGAGAATACACATAACAAACATTCAAAGTCACATCGGCCACGTCAAAAACACATCAAAAACtccaacaaaaaaaataccaCCCTGTACTACTTCTTTTGCATTTGCTAACGGTTCAACCCCACCCAAAGTTGTGCAGTCCAAATCAATCTACTCCTATTCCGAAAAAACCATTTACGGTAACCCAAAAGATATTTTGTGCCCTACAATGAAAGCCATGGCTCATACACCAAAGTTTGTTGACTGCTTGCCACGATATAATGGAGGCGATCCTGTCGATTTATCTGTTAATAGTCCGCAAAAACCTGTAATTGAAATAATGCGTGTGCCATACAGTTCATCATGTTCACCTTACAATCGAGATAGTGTTACGAAAAACCTTTATAAAACTAATTCCCCATTAATGGATGGACGACGATTGGGACCTAATTTAGAAATCACCTTAGTTGCCCCAAATAGTAAAAACGTTTCTAATGCACAAAAGTTACACAATTTCACACAAACCTCATCTTCCCAAATGCACATTCAAAGTGGTCCTCACCAATCACTCAAAATGGCTTCTGCTGACTACTATTCACCACGTAAATCGGCGAGAAATGAAGTCAATAGAAAGCACAACAAATCGCCTTCACCTCACGTGGATGCAAATATGTTCACAAGACCGGAAACCAGCAGTTCTAGTCAAATGAAAATGATGTCACAAAGTCCTTCAAGTGTTAAGCATTATACTAATCAAAGTTTACCTACTTTCCCACCTTACTTATCACAACTCTATGAGCAAGCGAGTAAGGGACTGCCACCATATTTACCTCTGATAGATCCAGCGACTTATTATGCTGCTGCTGTGCAGAACATGTATTCCACTAGTGCTATGAATTCCGCGCCACTGATACCAATCCCTTCGCCAGAACAACTTAAGTTTTATGCAGAACTGATGGCTCAGAACAGATTACCTTTTCCTTTTCAATTGCCAACAGATACCTCagtaaataacaaaaatatgaaaaaacaatag
Protein Sequence
MSDQTIEQTLMRMFKSSGGLTHGRSISESTLASWTLGMIRLQDVCEQITEYCNITLDTSEQHVDYRDARDEVLAISEKVVIRVEDLITWIIVEAEWTWGRLAKCEGEVEAVDTLESVPPRKATGLSFTSIDSGLDFYDVENERKNLDSYKNEKGPHVVILSFPKYCRYRGMMKRLEGVEDVYLKYKIVNALGGFYVIHPNTRVLFCKDTFDYPELEGHELLCNHLTPKLKGRPRGKRKKRSVSPGSESNESESSHSTNNLNTRGESKDGLRCESGAAPRRSTRCHENNENKDFLRKLGSFMKSNRTPIGRIPSLGYKELNLYEFYTKVQKLGGYDCVTGNRLWKTIFDDMSGHQNSTSAATVIRRHYERFLLSYERHIRGEEYKPLPISERRRLKSKRGCNSMSDPESSSCDNIAAATTSKKSLTAIASSENKEIKTEGKTSSLRSVRVKSDRQKDKQIQSEKHSLQNNNNNKYNSENWQPTTNTYSEISSPEIKPKIDKLIMKTESMTVKTELSTVITQSKPVKIEYATVKSECSAKNDAPLIDSTNKTNLNGNFPVKISVKIETNLVKTERSPVKVEESSFVKIENLASSSVKIEPAPIKIEKNSTPPVKSEPLTMSLERVKKEVTETKEDTISIKTESVVCPVTTAATTVSVGVVMPPVEGKENIPLITTDEGSAKSNLEVIEGLFKPQISEIIEETDTFRNNFSQEVKKRKLDILKEGGLEVTPVRPLSMSSTKDGRPSVIHQTMPVQMVPKPGKIEVMPPPTSTAPQKRIHITNIQSHIGHVKNTSKTPTKKIPPCTTSFAFANGSTPPKVVQSKSIYSYSEKTIYGNPKDILCPTMKAMAHTPKFVDCLPRYNGGDPVDLSVNSPQKPVIEIMRVPYSSSCSPYNRDSVTKNLYKTNSPLMDGRRLGPNLEITLVAPNSKNVSNAQKLHNFTQTSSSQMHIQSGPHQSLKMASADYYSPRKSARNEVNRKHNKSPSPHVDANMFTRPETSSSSQMKMMSQSPSSVKHYTNQSLPTFPPYLSQLYEQASKGLPPYLPLIDPATYYAAAVQNMYSTSAMNSAPLIPIPSPEQLKFYAELMAQNRLPFPFQLPTDTSVNNKNMKKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-