Basic Information

Gene Symbol
grh
Assembly
GCA_018342105.1
Location
JAFIRS010000239.1:448190-720005[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2e-51 3.8e-47 161.5 1.2 26 221 515 689 501 691 0.92

Sequence Information

Coding Sequence
ATGATCGTAGCTTCGAAACCGTTTGATACCGTGCCGTGCTCTTCTCAAATCACGGATACACAGAATCTGTCGACATTCCATCAAAGGGAACGAAAAGAAAGTTCGGAATTTTCGTCCTCGCACCCAGCACGCGATTTACCAGTGGTGGGTTTCCGTGGTATGGCTGACTTGCCCGAGGGGGCGGCCCCTCCAGAGGATCAGCAGACTTGGAGAGCATATTACGAACACCCCCTGACCGCAGCTACAACAGCGATGTTGAATATAGGCGGTGGAGCAGAGGAACAATCCACAACGATGGGGCTCATATACGAATATTACAAATTCCCCTCTCTACCGACCGATTCCAAAGAAAAATTAGCTGATATTTGGTCGGCAGGTTCCCAGGCCGGAGGCATTCTGACGTCCCAGCTGAAGACAACGGCCAATGGGTTGGTGAGTGGGTCGGGCTTAGACATGCCGACTCCGCCTCTAAGCACTGCTGGTCAACTGAATTCACAGGAGTTGCAAGGTTTATTTATTAACCAACACGTCGGCTATACACAGCCCGCGGCCACTGGCCAGAATTTGCAGATTGTCAAAAGAGAGCCGGAAGATTTGAGTCACCATCGAAAGTTGGATTGTAGTTCTCCTAGTTCGGGGAGTCTTGATGGCTCCATAATCATCACGAAACAGTCCCGGCCAAAGGTCGTACTGGTGGCTTCTGCTGGTTGCCAACCCGGAGATCTGGTGGTGGACGTGAACTCTATAAAAGACGAGAGCCAACACGGACTCGGCTCTCCGCAGCACGGCTCTCGCTCAATCAACGGAACACCCAGCTCGACACACAGCAGCCTTCCAGCAGACGGTTCGAATACAGGGCCCATCGAATTCATCTCTGCGAATGGCCTCAAACCAGCGATGTACACAACGCAGATATTCGCCTCCATGAGCAATGCACCACACAGCAGCGGAAGTGGCACCCCTTCACCCATACCCTACACCGACCACGTTCAATACAGTACGCAAAGTTCGATTGCCGGTGGGAGTAATTCGGCAATTTATTCTTCCACCGGTAGACCTAGTAGTTCGACTGCTTTCTCCGTGTCCGATCCATACTATCGCGAGTATTTTACGACCATAGCGTCCGGACCAGGTACCCCTGAGCCCGTCTATTCGACACAGCTGAGGCAGAATCAGCTGGGTTATGGAGACGACGCAGCTAGTGGCGGAACTACAGCTAGTTTTGTGGAGAGATACGTGCGACAATCTGTTTATGGGAAAGGTGTGATAGCTGCTGCTGGACTCACCGTCGATCTTCCGAGCCCCGATAGTGGAATAGGCGCCGATGTTATCACACCCCGGGACCAGAGCACGCTACAGCAGTCTTTCGACTACACGGAATTGTGCCAATCAAACCCGACACTATTGGATCCTTTATCTCTTCCTCAAAGAAACAGTAGTAGTTCTCAATCACCCGGAGGGCACTCTACTAGTCGAAGTCGACCCTGGCATGACTTCGGAAGACAGAACGATGCGGATAAAATACAAATTCCCAAAACGTTCTCTTCAGTTGGATTCAAATACCACCTAGAAACACCAATTTCCACATCGCAAAGACGGGAGGACGATAGGATTACTTATATAAATAAGGGGCAATTTTACGGAATAACTCTGGAGTATATTCCGGATCAGGAGAAACAACTCAAATCCCAGACTGTCAAGagtgtCGTCATGCTGAtgttccgagaggaaaagaCACTCATGAAGCAACGGATATTAGATGCAGatacgAAAAATAGTGTAGGTATCGTTGGCTGCATTGAAGAAATATCACACAATGCGATCGCAGTGTACTGGAATCCCATGGAGAGCCCAGCAAAGATAAATATTGCAGTCCAGTGTTTGAGTACAGATTTCAGCAGTCAGAAGGGCGTCAAAGGTCTTCCTCTTCATTTACAAATTGATACCTATGAAGACCCCAGAGATTCTAACGTGTTCCATAggggttactgtcaaataaagGTGTTCTGCGATAAGGGTGCGGAGCGAAAGACTAGGGACGAGGAACGAAGAGCAGCGAAACGGAAAATGACAGCAACCGGAAGGAAGAAATTGGATGAGTTGTATCACCCTATGTGTGAAAGATCAGAATTTTATGCGATGAGTGATTTAACGAAACCACCCGTACTTTTTTCTCCAGCGGAAGACATCGATAAACTAACTTCGATGGAACTCCAGGGATTTTACTCCCACGAAGATGGCTCGTTAGGTGGTCCTGTCGATCACGGGAAAACTGGTTCACCGTTTCTTCTACATACAGCTCCAAAGCCACCAAATACACCAACCTTGAAATTTCATAACCATTTTCCTCCTGATACAGAGAAAAAAGATAGTAGTATGATGGATAGTAGTTTATCATCAGATGGAAATGTTTTCTCTCCTCCGATGAAGAGAACCAAACTATTGAGTGTTGGATCGGGTAGTGCATTACCTCCACCTCTCAGTGAAAGAGTCATGCTCTATGTTCGTCAAGAAAACGAAGAAGTTTATACACCATTACATGTTGTGCCACCCACAACTACCGGACTCCTGAATGCTATTGAGAATAAGTACAAAATAAGTGCTTCAAGCATAAATAACTTGTATCGCAAAAACAAAAAAGGCATTATAGCCAAGATTGACGACGATATGCTAGCTTATTACTGTAATGAAGATCTATTTTTATTGGAACTGAAAGCAGTAGATGAGGATTTATTCAATATTACTTTTGTGGAACTCATGGACCACTGA
Protein Sequence
MIVASKPFDTVPCSSQITDTQNLSTFHQRERKESSEFSSSHPARDLPVVGFRGMADLPEGAAPPEDQQTWRAYYEHPLTAATTAMLNIGGGAEEQSTTMGLIYEYYKFPSLPTDSKEKLADIWSAGSQAGGILTSQLKTTANGLVSGSGLDMPTPPLSTAGQLNSQELQGLFINQHVGYTQPAATGQNLQIVKREPEDLSHHRKLDCSSPSSGSLDGSIIITKQSRPKVVLVASAGCQPGDLVVDVNSIKDESQHGLGSPQHGSRSINGTPSSTHSSLPADGSNTGPIEFISANGLKPAMYTTQIFASMSNAPHSSGSGTPSPIPYTDHVQYSTQSSIAGGSNSAIYSSTGRPSSSTAFSVSDPYYREYFTTIASGPGTPEPVYSTQLRQNQLGYGDDAASGGTTASFVERYVRQSVYGKGVIAAAGLTVDLPSPDSGIGADVITPRDQSTLQQSFDYTELCQSNPTLLDPLSLPQRNSSSSQSPGGHSTSRSRPWHDFGRQNDADKIQIPKTFSSVGFKYHLETPISTSQRREDDRITYINKGQFYGITLEYIPDQEKQLKSQTVKSVVMLMFREEKTLMKQRILDADTKNSVGIVGCIEEISHNAIAVYWNPMESPAKINIAVQCLSTDFSSQKGVKGLPLHLQIDTYEDPRDSNVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPMCERSEFYAMSDLTKPPVLFSPAEDIDKLTSMELQGFYSHEDGSLGGPVDHGKTGSPFLLHTAPKPPNTPTLKFHNHFPPDTEKKDSSMMDSSLSSDGNVFSPPMKRTKLLSVGSGSALPPPLSERVMLYVRQENEEVYTPLHVVPPTTTGLLNAIENKYKISASSINNLYRKNKKGIIAKIDDDMLAYYCNEDLFLLELKAVDEDLFNITFVELMDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00395018;
90% Identity
-
80% Identity
-