Gfla002932.1
Basic Information
- Insect
- Gonatopus flavifemur
- Gene Symbol
- nfxl1
- Assembly
- GCA_018340375.1
- Location
- Contig12:8348868-8357367[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 2 2.3e+04 -5.0 1.9 15 19 128 132 128 132 0.85 2 21 1 1.1e+04 -3.1 2.4 4 10 163 169 160 169 0.90 3 21 5.6e-08 0.00064 20.0 15.1 1 18 177 193 177 194 0.98 4 21 5.8e-08 0.00066 20.0 12.2 3 18 232 247 231 248 0.93 5 21 0.79 9e+03 -2.8 0.9 5 10 272 277 272 277 0.93 6 21 2.7e-08 0.00031 21.0 13.0 1 19 283 303 283 303 0.97 7 21 1.2e-05 0.13 12.6 9.5 1 18 339 356 339 357 0.98 8 21 0.017 1.9e+02 2.5 9.3 1 11 391 401 391 402 0.95 9 21 0.0027 30 5.1 1.1 4 10 410 416 409 416 0.98 10 21 3.4e-08 0.00039 20.7 12.3 1 19 422 440 422 440 0.93 11 21 0.95 1.1e+04 -3.1 0.6 6 10 469 473 468 473 0.89 12 21 0.00012 1.4 9.4 10.0 9 19 488 498 486 498 0.90 13 21 0.00071 8.1 6.9 6.8 1 12 508 518 508 518 0.95 14 21 1.2 1.4e+04 -3.4 6.7 14 19 550 555 550 555 0.90 15 21 0.22 2.5e+03 -1.1 0.7 6 10 581 585 580 587 0.86 16 21 0.00089 10 6.6 7.3 1 12 591 602 585 602 0.82 17 21 0.6 6.8e+03 -2.4 1.8 6 10 619 623 618 623 0.89 18 21 0.0004 4.6 7.7 15.6 3 18 632 647 631 648 0.94 19 21 2 2.3e+04 -6.6 3.4 9 13 654 658 654 658 0.71 20 21 1.3e-05 0.15 12.4 12.7 1 16 693 707 693 713 0.89 21 21 0.77 8.8e+03 -2.8 1.2 6 10 743 747 742 747 0.90
Sequence Information
- Coding Sequence
- ATGAAAAGGTCAATGCAGAAGTTCAAGAAGGTTCAAGCTGAGAATAAGATATCAATTGAAAAACATTTGAAACTGAATACCTATGTTGATTCTTCGAGCGAAGATGAAGAAAGTTTGGAAGATGCGCAAGCAGTGATAAGTAAAGTCTTGTCATCGTATCAAGGCAACACGACAGACAAAGAGAACATCTTATCCCGTCTTATTAATTCGTTTGAAGGAGGAGGAGTTGTGTGTTTAATATGCATCTCAACTATCAAGAAGATAGATCCAATATGGAGTTGCGTTAAATGTTACTCATCTTTACATCTGCCTTGCATTCTTCAATGGATTCGTGATAGTTTGTCCTATAAACGAGAGAAAGGAATTACACCAGTATGGGTATGTCCAAAATGCCGTATGGAATATGAAGAAAATCAAATCCCGAACGAATACAAATGTTTTTGCGAAAAAGCAAGCGATCCGGCGTATCAACCTTGGTGCATACCGCATTCTTGCGGCGATACTTGCGGCAAATCTTTACAACCCGAATGTGGTCACAAATGTGTTTTACTCTGTCATCCAGGGCCATGTCCTCCATGCGCAAAAATGGTTTCCGTGGTCTGTTACTGCAAGAAGCGAGGACCCGAACCTCGACGTTGCAACGCAAAAAACTGGAGCTGCGGTCAAGCTTGTAATAAGAAATACAAAAATTGTACACACAAATGTGCTCAAATTTGTCACACTGGAGAATGTCCTCCTTGTTTCGAGGTAGTTTCAACAGAATGTAATTGTAAATCTAACAAAGAAACCAAAAGCTGTAGTCTTTCCTCGTGGAAATGCAACAAGATCTGCGGGAAGAAATTGTCGTGCGGTATTCACACCTGTCAAGAAACTTGCCACAAAGACGATGGTGACTGTGGGAAATGTCCAGACGAGCAGAACAGAACCTGTCCTTGCGGCAAGAAGAAACTCGCTATCTCGTGCCGTGAAAAACGAATAACGACTTGTGGAGATACGTGTGATAAATTGTTAAACTGTGGTTCCCATTTTTGCAACAAGAAATGCCACGCAGACGTTTGCGGTCCATGTGTGGAAATAGTCAAAAAAAGTTGTAACTGTGGAAGTTATGAGAAAGAAATCGCTTGTGCCAAAGAATTCCACTGTAATAAGAAGTGTCCGCAAATGCGGCTTTGCGGGAAACACCCTTGTAATAAAAAATGCTGTAATTGCTTGATTAATAATACCTTTCACACTTGCGAAAAGGTATGTGATAATTTATTGAATTGTCGAAAACATAGGTGTTCGGCTTTGTGCCACACAGGACCCTGTTATCCCTGTCCTCGTACGGACGTAATTCAATGTAGATGTGGGAATCGTAAAATAACTGTGCCTTGTGGAACTAGAAAGAAAATCAAACCTCCCTCTTGTAATAAATTATGTAAAATTCCTCCTATTTGTCACCATTCCAAAAGAGAATCGCACAAATGTCATCAGGGTCCTTGTCCACCTTGTAAAAAAGTATGTAGTTTGGTGTATAAGAGATGCGGGCATACCTGCGTGGCTGTGTGTCACACCAAAGTATGGATCAAAGTCAATACGAATGAGGGGGCTAAAACTCCTGTGGGTCCATGGGATAAACCAAAAGAGATATTACAGCTAAAAACTTTGCCTTGTCCTCCCTGCCAAGTATCCGTGCCCGTGACTTGTTTAGGGGGACATGAAACTCAGATGTGGCCGTGTTACATGTCCAAACCCACTTCTTGCCAAAGACCGTGCGGTAGACTGTTACCGTGTCAAAATCACACCTGTGAATTGATTTGTCATAAAATTGATGATCCTTCTAATGATTCAGATGTAAGTATAATGTGCATGGAATGCGAAGAACCGTGTCTTCTGCCGCGGCCAAAAGAATGTATCCACAAATGTCCAGACCCTTGTCATCCGGTACCATGTCGCCCTTGTGAAAAATTTCTTCGAATTCCTTGTCACTGTGGAATCAGTACTTTATATCGAAACTGCGCTGAATTTACGACAGCGTCAGAGAATGAGCGTATCGGATTGTTGACCTGCGGGAATCAATGTCCGAAGACTTACCCTTGTGGACATCGTTGCATCGATAACTGTCATCCGGGACCTTGTGAGAATGGAGATAAATGCAAAAAGAGAGTAAAAGTGTGGTGCAAGTGTAATCAAATTAAAAGAGACTTTCTTTGTTATCAAATGAAAGATCAGAACTTTACGGTGGAATGCAACGAAGTCTGTCAATCTAATAAAGAGCAAAAGAAACGCCTTCAAGAATTGGAATTGGCGAAGAAGCAGAAGGAAGAGATGCAACGAAATGAGGAAGAGATAGCCAAATTTGAACGGAAATTCAAACCACGTAAAAAAGGGAAAGACAAAAATAATATTAAAATGTCATTGCAAGAGAGCAACTTTGAAAAATACAAATTTTTATGGCTGTTTGCTATATTTTTTAGTATAACGGGAATTATTACGATTTATATAAATGTTCCTCAACAATACACATAA
- Protein Sequence
- MKRSMQKFKKVQAENKISIEKHLKLNTYVDSSSEDEESLEDAQAVISKVLSSYQGNTTDKENILSRLINSFEGGGVVCLICISTIKKIDPIWSCVKCYSSLHLPCILQWIRDSLSYKREKGITPVWVCPKCRMEYEENQIPNEYKCFCEKASDPAYQPWCIPHSCGDTCGKSLQPECGHKCVLLCHPGPCPPCAKMVSVVCYCKKRGPEPRRCNAKNWSCGQACNKKYKNCTHKCAQICHTGECPPCFEVVSTECNCKSNKETKSCSLSSWKCNKICGKKLSCGIHTCQETCHKDDGDCGKCPDEQNRTCPCGKKKLAISCREKRITTCGDTCDKLLNCGSHFCNKKCHADVCGPCVEIVKKSCNCGSYEKEIACAKEFHCNKKCPQMRLCGKHPCNKKCCNCLINNTFHTCEKVCDNLLNCRKHRCSALCHTGPCYPCPRTDVIQCRCGNRKITVPCGTRKKIKPPSCNKLCKIPPICHHSKRESHKCHQGPCPPCKKVCSLVYKRCGHTCVAVCHTKVWIKVNTNEGAKTPVGPWDKPKEILQLKTLPCPPCQVSVPVTCLGGHETQMWPCYMSKPTSCQRPCGRLLPCQNHTCELICHKIDDPSNDSDVSIMCMECEEPCLLPRPKECIHKCPDPCHPVPCRPCEKFLRIPCHCGISTLYRNCAEFTTASENERIGLLTCGNQCPKTYPCGHRCIDNCHPGPCENGDKCKKRVKVWCKCNQIKRDFLCYQMKDQNFTVECNEVCQSNKEQKKRLQELELAKKQKEEMQRNEEEIAKFERKFKPRKKGKDKNNIKMSLQESNFEKYKFLWLFAIFFSITGIITIYINVPQQYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -