Basic Information

Gene Symbol
zfy1
Assembly
GCA_018340375.1
Location
Contig6:32844057-32874146[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 3.2 4.5e+02 2.0 4.0 1 23 518 542 518 542 0.92
2 13 0.02 2.8 8.9 0.6 3 21 600 618 598 622 0.89
3 13 0.0024 0.34 11.8 0.5 2 23 637 659 636 659 0.93
4 13 0.85 1.2e+02 3.8 4.6 1 23 676 700 676 700 0.93
5 13 0.87 1.2e+02 3.8 0.1 1 21 747 767 747 768 0.93
6 13 6.9 9.5e+02 0.9 0.4 2 16 792 806 791 813 0.81
7 13 0.0043 0.6 11.0 2.2 1 21 828 847 828 849 0.94
8 13 7.5e-05 0.01 16.6 0.7 1 21 855 875 855 876 0.95
9 13 3.4e-05 0.0047 17.6 1.2 1 23 895 917 895 917 0.97
10 13 0.00058 0.081 13.7 0.0 1 23 922 947 922 947 0.96
11 13 0.00012 0.016 16.0 1.5 1 23 956 978 956 978 0.98
12 13 0.003 0.42 11.5 1.8 1 23 990 1014 990 1014 0.96
13 13 0.003 0.42 11.5 1.7 1 21 1020 1040 1020 1045 0.94

Sequence Information

Coding Sequence
ATGGAGGGTTACGAGGATGACGACGATACTCATTTTTGTATCAAATGTCATTTAACGATAAACGGTCTTGAAAATTACGTACGTCATCGACAATCGGGATGTCGCCCAAACGACGATAAAGTCGTTCACGAGGAACCACCTTCCACGCCAACTACAGTCACTTATCCCGAGATTTTGAATGCTGACGCTTTTTTCAGTTCCCTCGAACTGCAAAGCAGTTCGAAAACAAATCCCCGTCGAGCGACGCCGTTATTGGACAGCGAAAGAAAATCGAAGAAGGACGATCGTAGAAGACGCAATCGAAAGTCACAAGGCGAGGATTCAGGATCCAAAGAAAAAATCCACAGTATGTTACCGGTAGTAGAGGAGGATCTCGATGATCCTACGGAACATTTATGCATTCCGTCGCTCGTTGGATTTCCCGATATCGTGGCCTCATCTTCCTCCTCCTCCGCCAAAGTCGTCCCAACTTCCGTCGTCGGAGGAACAACGACGACCAACAAATTGATTCAAACCTCCAGCGGGACGAAAACGATCGAACCTACAACGTTTTCCAAACACGAACCCGACACCTCTCTCGAAAGTTTAATGGATTCGAAACAGACGGGCGAAAGGAAACGACAGGACAATTCGCAAAGAATGGAACAAGATCATCAAAATTGGTTGGACGATACCATCATCCTCTCTGATCTTGAAAATAAAGATTTAGCGAGGTATCAGTTCGAATACCACCAACACGTGGATGAGGAGGAAGACGACGACGAGGAGGATTCGGAAGATGATATATTGATCAACGATTCAGCTGACGAGGAAACCGAATACGAATCCGATGAGGCGGAAGATCGCGAGCGTCCCCCGCGTGGGCATACGGGAGGTAAATGGAAACCAGGTCTGGAGGAGATGCATCAAAATCTAAGACAGATTCATCACGATGACGAAATTGATCAAGACGAGGAACATCACGATCATCATCAGGACCATCCTCCTCCATCTTATACGGGAGGCAAGTGGAAACCTACGGAATCCACTCAGAAAATCGAGGAATATGAAACCAAACATAGTCCGAGACAACCTCCGCCAGGGCATACACGAGGAAAATGGATTCCGGGGGCACAAACGGATATCGAAGCAGGATATTGGTGCAATCCTTGCGGTCGGAAACTCGCATCGAGATTGGTCTACAACAGACACCTTCTATCCGATTTACATGCGAAGAGAAGCGTCAGAGAATTAGATGGAAATCTTGACCTACCGCGGGGCGTTGATACATTTCTGCAGAGAAAAACAACTCGACGTCGTACAGCGACTTTGATGAAAAGAGAAGAGGAGGAAGGAGAAGCATCGGAAAGCGCAGAAATGACAACGAGATCTCGAAGAAGAGAGAAAGAAGTGATTTTGTGCGAAATGTGCCATGTTCGCGTGAAACGAGCACAGATTGGCAAACATTTACTCTCGCATTATCATTGTCGCGTGGCCGGAATCAATCCGGGAAGTCCCAGGGCACGTAAATTTCTCTTAGAAAATATGGGAAACGTGGTTCGACAGTGTCCTTTTCAGTGCTCTTCTTGTCGCTTCTATTGTAACACGGAAGATACCTTCTTACAGCACTGGCGATCTACTCTTCACACGAAAAACATAGATCAGATATCTGGAAGTTTTCGATGCGCTCCGTGCGATTTTTGGTGCGAGGATAATGAAACTATGGAATCGCATCTATTGAGTTCGAGTCATCGGGACGTAGTTTCGATGATGAATGGTTCCGTGCCGGTAGTAATCAGTCGTCAACTGGCATTGTTTTGCGGCAGTTGCGATCGTCGATTTCGTTACAATCTACAACTGAGATTACACGCGAGAGATACAGGTCACGTGGAAAGTTTCACGGCATCGGATGAGTATCAGAAAAGAATTACTTGCAATCTGTGTCCGCAAGTCGTGAGATCCCTAGTTTCTCTTCAGCGTCACCAATTGGCTTGTCACGTGAAGAAGGATGAAAACGAATTGGATGTGAACTCGCGTCCACCTCTTTACTTCTGTTCCTTTTGTCGATTGAACTTTTCTACTTGCCAAGAAGCCACTCTTCACCGTAGGACCTCGAATCACAAAGAGACCGTGAAAGCATTCAAATACGGCGAGGATCATAGAAAATCATTGATTCGGGAATGTCCTCATTGTAACGAGACGCAATCGACTCTCACTCAACATAAACAACATCTCCTCCAAAAACATTCCGAACTCTGTCACAGCTGTCCTCGATGTGGTTCACTCTTCGCTCTTTCGCAAGAAGTCGCCAGGCATACCAGGGAAAACGCGTGTTGCGAAGGCGGAGGACGCGTCGATAGTCCCGACGATGCGTTATCTTTGAAACAAACATGGAGATGCACCGAGTGTAAATTCTCCTCCGATACGCAAGCTGAATATCTCTTTCACAAGGTACTTCACACGGGGGACGTTGAAATAGATCAACGTAACGGGTGCAAAAGGTATCCATGTCCTATCTGCAAAAAGATATTCAAAAAAGTGACTTTGCGCGATCACCTGAGATGTCATACCGGTGAACGACCCTTCTCTTGCGTCAAATGTCGTGCCTCGTTTTCAACTAGATCGCAATTAAACGCTCATCAAAAACAATGTGCCAGATCCGGTTCGTCCGAGTGGATAGACGAAACTGGTCGCCGACGGAATTTCATCTGTTCGGAATGCGATGGTGCTTTCTACACAAAGCACGCTCTTCGACAGCATATGCTACGACACGCGGGAAAAAAGTACAAGTGCGGTCTTCCTGGTTGTCCCACGGTACTTCGAACGGCTTCCGAGTTGAAAGCTCATCGAAAGTTAGTCCACGATAGCACGGCATCCGATAGACGATTTCCTTGTACCGACTGTTCTTACGCTGCAAAAACTAAAACCCAACTTCGTCGGCATCGGATGAAACACGAAGACGCTTTGCAATCGGAGAAATTGAATTCCTACGCCTGTTCTTACGCTGGCTGTGACTTCAAAACTAAATTAAATTCTCATCTTCGGCGGCACGTGCGTTTGCATACGGGAGCAAGACCTTACAAATGCCGTCACTGTTCTTACGCCAGTAACAATTTGGAGAATCTAAGGAAACACGTCTTGTCGACCAATCTACATCCGGATAAGAAGATTTACGAATGTGAGTTTTGTCAAGGGAAGAACAACGCGGTACCTTTTGACACTAACTTTGCGAAAGAATTACGCGCTCATCTGTTGGAGATGCACATGGACGATTTTCCAACTCCGATTCATGCGACCAGTTATGTTAATGGAATATTTGAAACGAATCCAATCACCGTTTCCGTAGACGAGTCGTCTGTTTAG
Protein Sequence
MEGYEDDDDTHFCIKCHLTINGLENYVRHRQSGCRPNDDKVVHEEPPSTPTTVTYPEILNADAFFSSLELQSSSKTNPRRATPLLDSERKSKKDDRRRRNRKSQGEDSGSKEKIHSMLPVVEEDLDDPTEHLCIPSLVGFPDIVASSSSSSAKVVPTSVVGGTTTTNKLIQTSSGTKTIEPTTFSKHEPDTSLESLMDSKQTGERKRQDNSQRMEQDHQNWLDDTIILSDLENKDLARYQFEYHQHVDEEEDDDEEDSEDDILINDSADEETEYESDEAEDRERPPRGHTGGKWKPGLEEMHQNLRQIHHDDEIDQDEEHHDHHQDHPPPSYTGGKWKPTESTQKIEEYETKHSPRQPPPGHTRGKWIPGAQTDIEAGYWCNPCGRKLASRLVYNRHLLSDLHAKRSVRELDGNLDLPRGVDTFLQRKTTRRRTATLMKREEEEGEASESAEMTTRSRRREKEVILCEMCHVRVKRAQIGKHLLSHYHCRVAGINPGSPRARKFLLENMGNVVRQCPFQCSSCRFYCNTEDTFLQHWRSTLHTKNIDQISGSFRCAPCDFWCEDNETMESHLLSSSHRDVVSMMNGSVPVVISRQLALFCGSCDRRFRYNLQLRLHARDTGHVESFTASDEYQKRITCNLCPQVVRSLVSLQRHQLACHVKKDENELDVNSRPPLYFCSFCRLNFSTCQEATLHRRTSNHKETVKAFKYGEDHRKSLIRECPHCNETQSTLTQHKQHLLQKHSELCHSCPRCGSLFALSQEVARHTRENACCEGGGRVDSPDDALSLKQTWRCTECKFSSDTQAEYLFHKVLHTGDVEIDQRNGCKRYPCPICKKIFKKVTLRDHLRCHTGERPFSCVKCRASFSTRSQLNAHQKQCARSGSSEWIDETGRRRNFICSECDGAFYTKHALRQHMLRHAGKKYKCGLPGCPTVLRTASELKAHRKLVHDSTASDRRFPCTDCSYAAKTKTQLRRHRMKHEDALQSEKLNSYACSYAGCDFKTKLNSHLRRHVRLHTGARPYKCRHCSYASNNLENLRKHVLSTNLHPDKKIYECEFCQGKNNAVPFDTNFAKELRAHLLEMHMDDFPTPIHATSYVNGIFETNPITVSVDESSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-