Basic Information

Insect: Gonatopus flavifemur
Gene Symbol: salm
Assembly: GCA_018340375.1
Location: Contig19:3228409-3366306[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 3.1e-06 0.00043 20.9 0.9 1 23 425 447 425 447 0.98

2 7 6.2e-06 0.00086 20.0 2.1 1 23 453 475 453 475 0.98

3 7 0.039 5.4 8.0 3.8 2 23 860 881 859 881 0.98

4 7 2.7e-08 3.7e-06 27.4 0.6 1 23 887 909 887 909 0.97

5 7 0.00043 0.059 14.2 2.7 1 23 919 941 919 941 0.98

6 7 0.0013 0.18 12.6 1.9 2 23 1254 1275 1253 1275 0.97

7 7 0.02 2.7 8.9 1.4 1 14 1281 1294 1281 1295 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	3.1e-06	0.00043	20.9	0.9	1	23	425	447	425	447	0.98
2	7	6.2e-06	0.00086	20.0	2.1	1	23	453	475	453	475	0.98
3	7	0.039	5.4	8.0	3.8	2	23	860	881	859	881	0.98
4	7	2.7e-08	3.7e-06	27.4	0.6	1	23	887	909	887	909	0.97
5	7	0.00043	0.059	14.2	2.7	1	23	919	941	919	941	0.98
6	7	0.0013	0.18	12.6	1.9	2	23	1254	1275	1253	1275	0.97
7	7	0.02	2.7	8.9	1.4	1	14	1281	1294	1281	1295	0.92

Sequence Information

Coding Sequence: ATGTCACGTAGAAAGCAGGCTAGACCTAGCCGTGCCCATCTCGAGGAGGATCTTCTTGTTCATGGGCCTCTACAACTCGTTCAACAGCTGCAACCGCAAACCAGTGCCGATAGCACTCTAAACGACACTCGAGATGAAAACGAATTCGCATCAGACGGAGAGGAGAGTACCGTGGGAAACGGTGGAAGAGAGGAAGCGGTGGATCTTACGGCGTCGCGTTCCCATCATGGAGACGAGGATGAGAAGGATCAGGAGGATCCTTTGGACGAGGACGAAGAGGAAACGATTGACGAACAAGAGGAACAGGACGACGATGAGGAGGGATCGCGGAAACAAATACGACATCGTCAAGATGCGGAGAATAATAATAATTTTGTGGAGGGTGGCCCGCCAACAGGAATCTTTCCACCAGCTGGAACTAGTCATGTTACTCTCGAGGCTCTTCAAAATACTAAAGTGGCGGTCGCACAATTCGCGGCAACTGCTCTCGCCGGTGGAGTCGATAGCGAAGCGGCTTTACAAAATTTGGCTGTACTACAGAGTCATTTATACACGCTACAACACCAGCAAGTGTTCCAATTGCAGTTGATCAGTCAACTGCAACAACAATTATCGGTCACTCATACCCAGCCACCTGGACAAATGGGAACCGGATCTGGAACAGCAACGAATGAAACCGTAGCGACGGCCGCAACAACGACAACGGAATCATCTTTAATGAACAACGAGGAGGCCTCCCCATCACCGATCATGCTCCCAAAATCATTATCCAGTTTAACTTCTCCTCCCACTTCGCGTCCTCCGAGTCATCAGCAACCATCTCTGTCGCCAACGATGCCGAGCAGTACTTCTGGTCAGGAGAGACCGTTACCAACTGGCAGTGCATCGCCTCTTAATTTTCCAGTACTTCCATCCAATACTACCAACTCGACCAGTACGACGAATAACAACACCGTTGTGTCGATATCCACCACGTCGACGACAACGAACAGTAGCAGTCAAATCCCGTTATCTCATCAAATGCCACCACTTTGTTCCATAAGTTCTTCTCTCGCTTCGTCGATTATTACGAATACGGATCCTCCCCCGCTTCACGAGCCAAACACGTTGGAAATGTTACAGAAGCGTGCGCAAGAGGTACTCGATAACGCCAGCCAGGGTCTATTAGCAAACAATTTGGCAGATGAATTGGCATTTAGGAGCGGCAAAGGATCTCGACTATCTCCGTATGATTCGAAATCAGGTGGTGGTAGGGGCGAGTCGTTCTTCAAACATCGTTGCCGGTACTGTGGCAAAGTCTTTGGAAGCGATTCGGCGCTTCAAATCCACATAAGATCGCATACAGGTGAGCGACCCTTTAAATGCAACGTCTGCGGAAGCCGTTTTACCACCAAAGGGAATTTGAAGGTTCATTTTCAGAGGCATACCGCCAAATTTCCACACGTTAAAATGAATCCGAATCCCATTCCCGAACACCTAGATAAATATCACCCGCCATTACTCCAGCAAATAGCGACGGGTCAAAAGCCAATGCCGTCTCCGCCGCCACCACCACAGCCACCGCCACCCACTCACCATCCTACATTTCATCCTGCAGCAGCGGCAGCGGCAGCGGCAGCAGCGGCTCATGGTTTTCTTCCACCTCAACCACCTCTCCCCTTAAGTTTAACCCTGCCTGGAATGCCACCTTTGTACCGTTCCCCGGTCATTAACAATCGCGATGACCAGGATGTACCAGAAAATTTAAGTAAACCTGTAACTACCACCACCACAACCACGATGTCCCCGACCTCTCCCGTTGCATTGTCAAATTCTCGTCATTCCTTCACCGATAGTCAATCAAAACATCAGCTCGAGGAGAGGGGTGAAATCAAATCGGAACAAAGATCATCGCCTGTACAAGATCAAACTCAATTGTATCAAAGACCGGGGAGTAGAGACGACGTGGATCGAATCACACCCAAGAGAGAGCCCGAGGAACTAGAAGAGGTTGGCGACGAGGAAAACGAAGACTTCGAAGATACGTCGAGACGGTACCTTAATTCCCCCCAATCGACTATCCAAGCGAATCCATCTTTCCAGTCGCAAACTTACGAAGATTGTAGTATGGATAGTAAGATGAGCGCTCGATTAGAAGGGGATGCGGATGGGGATATGGAGGTTGACGACGAAATTGAGGAACAACCCGAAAACTTGTCAGGTAGAGGAGCCATCAATCGTTTACCCACCCAAATGTTAGCTTATCCAGGTGCCTCTCCGGCAAGCAGTAGTGCGAGCAGTGGCAGTTTACAAACCTCTTTCGCTGGAATTCTTTTTCCCGGGCCACCACCACCACCTGGACCACATCATCAGTTAGCACATATACCTATGACAACGTCACAAGGATCCACACCTGGCGGAACGGGCGAGATGATTGTGGATCCAGCCAAAGACCCAGCTATATACTCCAGTTTGTTACCTCGACCCGGTAGTAACGACAATTCCTGGGAAAGTCTAATCGAGATCACCAAAACATCAGAAACATCCAAATTACAGCAACTCGTCGATAATATCGAGCACAAACTCACAGATCCGAATCAGTGCGTTATATGTCATAGAGTACTTTCGTGTAAAAGTGCTTTGCAAATGCATTATCGGACTCATACCGGGGAACGACCCTTCAAATGTAAAATTTGCGGTAGGGCGTTCACGACCAAGGGTAACCTGAAAACTCACATGGGAGTGCATCGAGCTAAGCCACCGTTACGAGTTCTACATCAATGTCCCGTTTGTCATAAGAAATTCACCAATGGTTTGGTATTACAACAACACATAAGGCTACACACGGGCGAGCCAACGGATCTCAGTCCCGAACAAATACAAGCAGCCGAGGTTAACGAGTTCCCCCCAGGGTATCCGCATCATCCGCTCGCTTCGTTCCTACCGCAAGGCTTTCCGCCGATACACGCGCCCGGAGCTGCATTCCCATTGGGGTTCCACCCACCCAGACCTACCATAGATCGAGCTTCCCAAGAGAACGACCTTCACGATTCCAAAGAGGAATCAACCCAACATCACCAGCAGCAATCCCAACATAGGTTCATGGACGAACAAAACGAGGAAGTGGAAGATCAGGACGACGAGGAAGAAGACCGGAGGGAAGATGACGAGAGGTGCGAAATGAATCAAGATAGACGTAGTAGCGTGGACGGGGAAGACGATCAGGACAATGAAAATGATTCCGAACATAAAGAAAGCATTCCCACATTTTCGACCTCTTTGGCTGCTCTGGAGAACCAAGTGAGAACGATCACGACGACTGCTAATACTACGGTTGCCAACGTCGCCGGGTCTCCTCCGTTCCATCGTTTCAACGGCAGTGAGAAAAGCAACAGCCCACCGAGCGGAGGTGCTCCTTTGGATCTAACTCCTAGAGCATCTTCGACACCTGGTTCGATAGCTTCGACGGTCACCCCACCTCCCTTGCAACAACACCACCCTCCACCTCCGCCGCCACCTCCTCATCCATTTGGCATGTTCGCGGGTTTGTTACAAGCCGTTTCCACTAGTTCGGCATCCACGAATACGGCCTCCAATTTGAACACCAGCGTCAATAGCGTAAGCGCGAACGGAGGAGGAGCGGGAAACGGATCCAGCGGGAACAATAACGCAAATAGCGGTCCTCTAGCCTCTCTAACCACATCTGCCGTACTTGCCGCGACTTCGACTTACAATCCACTCGGTCTAGCCGTCGGAGGGCCAGCAGTACGTGGAAACACCACATGTAATATCTGCTACAAGACATTCGCGTGCAACTCAGCACTCGAAATACATTACCGAAGTCACACGAAGGAGCGACCTTTCAAGTGTACCATATGCGACCGAGGCTTCTCAACCAAGAAGGATAGCGGTACCACCAAGTTGGAGACTTGTTCCTGTGCACATCAACGTACTCCTCACGCTGTCACAACTATCCTCGAATCCAATCCCAACGAAAGAGAACGCAGGCGACGGCGGCCTGAGGAAAAGAAGAACCGGGGGCGGACAGGAGTTGGGAGGGGGCGGGACCTGACGTCTGTCTATCCTGCCGTCCGCCTGCCCCCGTTGATGCCACCCGCCCTCGGACTTCTACCCTCGAACCACCTCTTCCTGGGGAATATGAAACAGCACATGTTGACCCATAAGATTCGTGACATGCCACCGCATTTGTTCAGCGATGCCAAACAACCAATAACGTCACAGCAGCTCGCTCCACAACCACAACCGCAAATTCAGGATCACGAGAATTCGACGAGTCCGATGTGTGCGGACGAATCGAGTTTGCCCCCGCCACCGCCACCTCTACCACCTCCACCGTCGACGATGCCGCCAACTTCCATGGAGGCGGCTATGCCGGTCAAAAGATCTCCAACCGAGGGAGATTTACCGGCTCCAAAGAGACCGGCCAGTGCATATGGGAACACATATGTGGACCAACGGAGCCTCACGTCGAGGTCGTCGAATGTCGTTGGATCTGCCACCTCTACCGCTCACGTCCAAGGACTCGGAATTTCTACAAAGACGACCGGATCTCTTTTACCCGTATCTACCCGCGCCATTTCTTAA
Protein Sequence: MSRRKQARPSRAHLEEDLLVHGPLQLVQQLQPQTSADSTLNDTRDENEFASDGEESTVGNGGREEAVDLTASRSHHGDEDEKDQEDPLDEDEEETIDEQEEQDDDEEGSRKQIRHRQDAENNNNFVEGGPPTGIFPPAGTSHVTLEALQNTKVAVAQFAATALAGGVDSEAALQNLAVLQSHLYTLQHQQVFQLQLISQLQQQLSVTHTQPPGQMGTGSGTATNETVATAATTTTESSLMNNEEASPSPIMLPKSLSSLTSPPTSRPPSHQQPSLSPTMPSSTSGQERPLPTGSASPLNFPVLPSNTTNSTSTTNNNTVVSISTTSTTTNSSSQIPLSHQMPPLCSISSSLASSIITNTDPPPLHEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRSGKGSRLSPYDSKSGGGRGESFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVKMNPNPIPEHLDKYHPPLLQQIATGQKPMPSPPPPPQPPPPTHHPTFHPAAAAAAAAAAAHGFLPPQPPLPLSLTLPGMPPLYRSPVINNRDDQDVPENLSKPVTTTTTTTMSPTSPVALSNSRHSFTDSQSKHQLEERGEIKSEQRSSPVQDQTQLYQRPGSRDDVDRITPKREPEELEEVGDEENEDFEDTSRRYLNSPQSTIQANPSFQSQTYEDCSMDSKMSARLEGDADGDMEVDDEIEEQPENLSGRGAINRLPTQMLAYPGASPASSSASSGSLQTSFAGILFPGPPPPPGPHHQLAHIPMTTSQGSTPGGTGEMIVDPAKDPAIYSSLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRVLHQCPVCHKKFTNGLVLQQHIRLHTGEPTDLSPEQIQAAEVNEFPPGYPHHPLASFLPQGFPPIHAPGAAFPLGFHPPRPTIDRASQENDLHDSKEESTQHHQQQSQHRFMDEQNEEVEDQDDEEEDRREDDERCEMNQDRRSSVDGEDDQDNENDSEHKESIPTFSTSLAALENQVRTITTTANTTVANVAGSPPFHRFNGSEKSNSPPSGGAPLDLTPRASSTPGSIASTVTPPPLQQHHPPPPPPPPHPFGMFAGLLQAVSTSSASTNTASNLNTSVNSVSANGGGAGNGSSGNNNANSGPLASLTTSAVLAATSTYNPLGLAVGGPAVRGNTTCNICYKTFACNSALEIHYRSHTKERPFKCTICDRGFSTKKDSGTTKLETCSCAHQRTPHAVTTILESNPNERERRRRRPEEKKNRGRTGVGRGRDLTSVYPAVRLPPLMPPALGLLPSNHLFLGNMKQHMLTHKIRDMPPHLFSDAKQPITSQQLAPQPQPQIQDHENSTSPMCADESSLPPPPPPLPPPPSTMPPTSMEAAMPVKRSPTEGDLPAPKRPASAYGNTYVDQRSLTSRSSNVVGSATSTAHVQGLGISTKTTGSLLPVSTRAIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -