Basic Information

Insect: Gonatopus flavifemur
Gene Symbol: -
Assembly: GCA_018340375.1
Location: Contig3:41948870-41985335[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.00029 0.04 14.7 0.2 1 20 162 181 162 183 0.95

2 23 0.96 1.3e+02 3.6 0.6 3 23 210 231 208 231 0.91

3 23 0.00066 0.091 13.6 0.6 1 23 644 667 644 667 0.97

4 23 1 1.4e+02 3.6 0.0 5 23 674 693 673 693 0.93

5 23 0.75 1e+02 4.0 2.4 2 23 700 721 699 721 0.96

6 23 0.36 50 5.0 0.2 2 22 749 769 748 769 0.92

7 23 0.00023 0.031 15.0 0.5 1 22 883 904 883 904 0.97

8 23 0.00022 0.03 15.1 0.3 2 23 912 934 912 934 0.92

9 23 0.0067 0.93 10.4 3.7 1 23 944 967 944 967 0.92

10 23 0.51 70 4.5 0.2 2 19 990 1007 989 1010 0.90

11 23 0.01 1.4 9.8 4.2 1 23 1017 1040 1017 1040 0.95

12 23 0.00079 0.11 13.3 6.1 1 23 1051 1074 1051 1074 0.94

13 23 7.6 1.1e+03 0.8 0.5 2 19 1119 1136 1118 1138 0.81

14 23 0.053 7.4 7.6 3.3 1 23 1145 1168 1145 1168 0.91

15 23 9.8 1.4e+03 0.5 0.2 1 9 1177 1185 1177 1186 0.86

16 23 0.12 16 6.5 0.0 2 21 1254 1273 1253 1274 0.94

17 23 0.72 1e+02 4.0 4.1 1 23 1281 1303 1281 1303 0.95

18 23 1.2 1.6e+02 3.3 0.2 1 19 1313 1331 1313 1336 0.92

19 23 0.00093 0.13 13.1 0.2 2 20 1444 1462 1443 1464 0.93

20 23 0.0089 1.2 10.0 5.2 1 23 1471 1493 1471 1493 0.98

21 23 1.7 2.4e+02 2.8 2.4 1 19 1503 1521 1503 1522 0.88

22 23 0.048 6.6 7.7 0.6 1 23 1715 1738 1715 1738 0.97

23 23 0.057 7.8 7.5 0.1 3 23 1760 1781 1758 1781 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.00029	0.04	14.7	0.2	1	20	162	181	162	183	0.95
2	23	0.96	1.3e+02	3.6	0.6	3	23	210	231	208	231	0.91
3	23	0.00066	0.091	13.6	0.6	1	23	644	667	644	667	0.97
4	23	1	1.4e+02	3.6	0.0	5	23	674	693	673	693	0.93
5	23	0.75	1e+02	4.0	2.4	2	23	700	721	699	721	0.96
6	23	0.36	50	5.0	0.2	2	22	749	769	748	769	0.92
7	23	0.00023	0.031	15.0	0.5	1	22	883	904	883	904	0.97
8	23	0.00022	0.03	15.1	0.3	2	23	912	934	912	934	0.92
9	23	0.0067	0.93	10.4	3.7	1	23	944	967	944	967	0.92
10	23	0.51	70	4.5	0.2	2	19	990	1007	989	1010	0.90
11	23	0.01	1.4	9.8	4.2	1	23	1017	1040	1017	1040	0.95
12	23	0.00079	0.11	13.3	6.1	1	23	1051	1074	1051	1074	0.94
13	23	7.6	1.1e+03	0.8	0.5	2	19	1119	1136	1118	1138	0.81
14	23	0.053	7.4	7.6	3.3	1	23	1145	1168	1145	1168	0.91
15	23	9.8	1.4e+03	0.5	0.2	1	9	1177	1185	1177	1186	0.86
16	23	0.12	16	6.5	0.0	2	21	1254	1273	1253	1274	0.94
17	23	0.72	1e+02	4.0	4.1	1	23	1281	1303	1281	1303	0.95
18	23	1.2	1.6e+02	3.3	0.2	1	19	1313	1331	1313	1336	0.92
19	23	0.00093	0.13	13.1	0.2	2	20	1444	1462	1443	1464	0.93
20	23	0.0089	1.2	10.0	5.2	1	23	1471	1493	1471	1493	0.98
21	23	1.7	2.4e+02	2.8	2.4	1	19	1503	1521	1503	1522	0.88
22	23	0.048	6.6	7.7	0.6	1	23	1715	1738	1715	1738	0.97
23	23	0.057	7.8	7.5	0.1	3	23	1760	1781	1758	1781	0.94

Sequence Information

Coding Sequence: ATGGCACGAGTCGTGGAATACCAGAGACCTGTCGATGTAGTTATCACTAAATCCACCTTGCAAGAAGACCATAATATTCGTCTAATTGAGTCTGTGAAGATTAAAGAAGAATTACCAGACAACGCATCCAAAGAACGTCCTCACGATGCTGCAGATGGTACCACCGACGATGATTTTCAAACCCAGGAAATTCCAACAACTGATGAGCTGAAAGACTGTGCAGATAATGGAGCCAATCAATCTGTTTCCCAAGATGAGTGCAAACCCACAATCCCTCGAGTTCGGAAACCTAAAAAACGTGGACCCTGTTCCGAGTACATTAAGAGAAGAAGACCCAAAAAGAAGAAAAATATTCCTATGACAAATGAAGAACAATTGAATCTTTCGAATAAAGAATCATCAAAAACTCAAGATAAACAAGAAAAACAAGACAAACAAGTGATTCCGGGTAAACGTAAGTATTTCCCGAACTCAGCAGGTCTGTACGAATGTCCTGTGTGCTCCCTCTCGTATCGCAAAGCTTCAAATTTGAGCTCACATATCATACATAACAGTAAACCAAGGGAATATATCAATAGAAAATTATCATTTTGCAAAACGTACTCGGACTCTTATTTGAAATATGGATGTGCGTTCTGTGTAGAAAGATTTGTTCTCAAAGTGACTTTGCAAGCACATATATTTCATTTCCATTCTGATGAAGTTGGTGTTAATCGTTCTTCCACGATCGCATCCGTCGATACATCTTTTGATGCATCTGTCGACAGTAGTATGAATACTGCCGACACTTTCGATACTACCAATAATGAGTCGGATTTGGGACAATCTCGGCAAGTAAAAGGAAATCAAAAAGACTTGAAAAGTGAAAAACCTGTAAAAAAATTGCGACAAACTACGATGAACGAATTTCTCAGTGTCTCAAATAAAAAAGATAATGATACTGAAACCAGTACTCCCACCGCCATTACTAAATCGACAGTAGCTCAGGAAGAAAATGATGTATATCAAATGAGTGCTTCCTCGAATACTCCAAGAACAGTCAAAGATGCGAATGGTACTCCTACCCGGAAGAAATCTATTAGAGGGAATGAAAATTCTGATGAAGCGATTATGGCATCACTAGAAGACTCGAGTGACAATGAAAGTGTAACTCCGAGAGATCGTTATCCTCTCCGCAAATCCAGGGGCAATTATCTTCGGAATTTCCTTACTGAACGAGCTATGAGCACTCGCAGTTACAGAAGAACAACTAGCATCGGTGGTGAAGATTTTGAAACTACGGATTACTTTTTGAGACCATCGCGCACAGCGGCAAGGAATAGTCATTTATTTTCAAGTAATTATGGGTATTCGGATAGCTTTGATTCAGACGATGAATATAATTTCATGTTATCTTCGAGAAATTTGAGAGGTCGTAGTTCTTTCACAAAAGCTATCGAACGAGAGTTGAAATTCATATACCAATGTCGAGAATTCTCTATACCTTTAGTGAGATGCGATTATGACCAAAATCACGTGGATGGTGAGAATTCCGAAACTAGTTCACAATGTTCTACGGATTCTGTAGGAAGTTCTAACTGTAGTGAAATTCTTGACCGTTTGGATGATGTGAAGAAAGAAAAATCTAATCCTGAATATGAAAATCATGTAGTCGAAGTATCTCCTGATACTGTACTAGACCATGATCTTCCACAAATTAATTCTTCAAGACTGGAAGAGTTTTTAACGGATTGTAACAAGAGTGTTAAGTCTGAAAACTCACAGTCACAATTCTTTTCTCAAGAGGATATCAAAACGATAAGGTCATTCAACGTTCCTAACGTCGTTTTGAAAGAAGTGGAAATCAGATTAGTAAGATCACCTCATATTGACAATTTGGCCACTCAAACAAATACTTCGCAAGCGAGCACTTCCGACGATAGAACAACTTTTGTATGCAAAATTTGTGAAATGGGTTTTCCTTCTAAATATGATAAAAAACGGCATGTCAAATCAATTCACACAATTTATATGTCAAGCATATGTGGGGCAAGGTATACTATCAAGGACAAGCTAATTGAACATTATATGCAGCAGCATGTTGCAACAAAACAGAACAAGTGTTACGTTTGCTACGCATCATGCTTTTCTAAAGTTTTATTGAAACAACATTTAACGTTACACTGTATCAAGGCTTTACGATTACCAAACGATACTTTACCGGTGGATGTTGATCTCAAATGCGATGAAATATATAGAAACAATACTTGTCTTATTTGCGGACAAACATTCTGGTTACATTCCGGTTTAGAAGCTCATAAAAAAACATGCAAAGCCCCAACAACTCAAGTTCCACCAGAAGTGTCAGATACTGTGAGCAATGATAATCAGCACATTAAAAGCCCACGTGCGACAGTAGCGAGTGGACCGTTTACTCACTCAAGAGTCAAAAATCGAACCACTCAAAATAAATATCGGTCCTCTGCAAATGTAAACGGAACCGTTTTTTCATCCATGACAGAACCACCAACGTTTTTGAATCCGTATTCTGTGAATCAAAAACTTGACACTCTCCACCAAAACACTCCACAACTCGAAGCAAGTGACCTGTCCGCATCAGATGTGATCCCACAAGACGAGGAGAATGGTGGGATACAGGGAAAGAGATTCCCATGTGATATTTGTGGGACTAGATTTCAGACTTACAAGACTTTATGGCAACATCGGCGTACGTACATGGATCCACCGATTGAAGTTTGTGACGTATGCGGTACCGCTTTTGCCACAAAAAGACTGTTGCGAAAACATTTCACTTCCGCCCACGTGCATGAAATTTCTCAGACCTATCAGTTCCATTGCAACATTTGCAATCAAGGTTTCTTTAAGAAAGAAAATTTGAGGATACATGAACTACATCTGCATTATAATAAAGTTCATCCCCTTCCACAAGAATGGAAGAATCCTGATCAGCAGTGTAAAACGAACACTATGTGCAACATCTGTAATCTCATTTTCGAAACTCACGATCGTTTCATCGAACACAGTATGTACTACTATAAAAGTCAAAAGTTTCCCTGCTCTTTCTGTGGTAAAACGTTCGAAGGGATGTATATGTTGCATCATCATACCAAATTAACTCATTATCCAGAAGAAACCAGGAAATCTTATTGCTATGTTTGTAACGTTTGTGGCGAGGGATTTAAACATCAATCTCATTTCCACGCACATAAATTACACGTTCATGGCAAAGAAGAAGGTACAGTCAAATCAACGTCGTCTCATATCAATCATCCTGTGAAAGATGCGTCCGAAGTTTTAGAAGAAAAAGTTGCCGTGAATCAAGAATCGAGTGCCTTCACTCTACCGGATTTAACCAGATGTAAAATTTGTCACATAAAGTGCATAAGTGATATAGAAATGAGAATGCACGAAGCAGAGTTCTCTAACGATGGATATCCGTGCGATAAGTGCTCCAGAAAGTGTCGCACGATGCCTTTATTGCAGAGACACAAATATCTCACGCATTTCAATTCCACTTTGAATATTGGACACAAATGTACAATTTGTAATGAAGTCTTGCTTACTGTAGTCGCGTTATTGTGTCATAACAAGCATTTTCACAACGTTAAAGATTCGGACTTGAGTGCGTCGAGTAATACTGAAAAGAATTCTGCCGGAAATCAAGAATCTGAAAAATTATTGAATTGTACGGCTGGTGAAAGACGAGTTGATTCAAATTCAAATAAACCTTCGAGTGAAGCGACAACGGAAGGTATTCTCGTTTGTCAAACATGTCAAGCCAAATTTGTGACTGTCATGGAGTTGAAGGATCATATTATGGAACTGTCAAATCAAGGGAATCACGCATGTGATATGTGTCCAAGAAAATTTCTCAAACCATTGTACCTGGAACGGCATAAGTGTAAACACAGGGTTAAAAGTGTTGGTAACTTCAGGTACTTGTGTTCCGTCTGTAAAGAAGGATTTATTACAATCAATGGTCTTATTTCCCATGACTTACATTTACATGCACAAGAAATACATTCCGATCTTCTCAATAAATCAAATCAAAACGAACAAAACGAGGCAGATGTCTGTGTTGGACAAACAACAATCAATTCTTCCACGAATCAACCTTCAAGTGAACAAGTCGAAGAGGATCCCGCAGCCGGATGGATGAAAATTCGAAACAGTATGATACTAGCTACTAACGTGTCTTCTACTTCATCGAGTTCGAATAATCAAAAACTCTCCAGAAATATTCTACTACCTACGCAAAGTGAAACCACTCCCATCGATCCTCTTTTAAAATACTCCAACCCCGAAACCGCTCAAAAGCCTTTAATTATTCAGTGTACTGTTTGCAGTTTGAGATTCGATAGTTCTAGAAATCTTACGAGACACGTTTTACAGTACTCGAATCAAGGCGATTACGTATGCGAAGTGTGTGGTAGAAGATTTTCCTGCCCCTCGCGGTTTAGAGATCATCATCGGAAACACTTGAGCAAGGACGCCCAGAATTTAAGATATTTTTGTTTCGAATGCGGAGAGAGATTTCAAGATCCAAGATCCGCTCATGCGCATTGTGTACACTTCCATGGACCGCAAACGAGATTTGGTACAGGTAAAAATCCAGTGTCAACTACTGCTGTATTGTCTACTCCCAACAAAAACCCTACACAAACTCAACAAAGAACAACTGGAAATCTTTTAATCACCAAACCTCCCGAACAAAGTTCGGGTATTAGCAACGCTGGGAAAAATCTCACTGCTAATAATCCTATGAGAAATGTCGTCAACAACGTCAACAATTCTGGAAAAAAAAGTCTTCTCATCAATACCAACAACGGCAAAAGTTTAGTGAACAATAGAATCACGGTGAAAAAGTGGTCTTATTTCCAACCAGTTTCATCCGGACCCTCTAATCAAAGAAATTTATCGTACGATGTCGTTATCGACAATCCTAATTCCTTACCGATAGAAGATAGAGATCCTCTCGCGATAGATAACACCGCCACAGATGTCGAATTAATTGTACCAAATCTATCTGATATGATGAATAGACATAATCTACTTCAGAATAATAGTTCGAATAACATAATCGAAATCACAAATGGTACATCACAAATAAAAAATACGAATCCTTCGAATGAAACTATAACCTACACTTGTCCTATATGTATCTTAGAATATTCCAGCTTGAGACTCTTCCAAACGCATTATAGATACGTTCATGCAAATGCATGTGCAACTTCGGCCCAGCAAGCAATGATGATGGAGAACGATCCTATTATACATTGCGTAATTTGCAATGCACCTTTCACCGAAGAAATAGATTTCAAAGTCCATATGGACAGCGTTCATATGCCGCGTTGGAATGTTGTGCAAAATCATGACCCGAACAATAGCGAACAAATCTCACAACCTTTATTTCCGACTCAATCATTGAATCGTTTGGTGCACGAAGTTTCCGTGTCGCAAGGAGTAGAAGAGAGGAAAAGAAAATTAGAGGATATCCAGTCTAATACAACTCCACCTCCCCTTAAGCAATTGCGACTGCAAGTTGAAGATGATGTGGCGACGATTGAACCAGCGGTCAAACAAGAACCTAATGATGTGACTGACACGACTGATGTGACAAGTAAAAATACTGTCTCCGAAGATGCACCTGCACCACCTGATACCACTAAAATTGGTAAATTAAAAGTCCGATCGTTTGCTAAAATTGTAGAAACTTTATCTTCTGAAAGCGCTAACGATAATCAACTAACTGTCAACAATAATCAAACTAATCAGCCTTCGGTTTACGGTAGAACGTATGCAAGACCGAAAGAACCAATGGGTGTGATCAGGTATGTTCCAGCGAATCGAATATTCATCGCACAAACAGCTAATCTTTCTCAAAATTCCATGTATCTTCCATGA
Protein Sequence: MARVVEYQRPVDVVITKSTLQEDHNIRLIESVKIKEELPDNASKERPHDAADGTTDDDFQTQEIPTTDELKDCADNGANQSVSQDECKPTIPRVRKPKKRGPCSEYIKRRRPKKKKNIPMTNEEQLNLSNKESSKTQDKQEKQDKQVIPGKRKYFPNSAGLYECPVCSLSYRKASNLSSHIIHNSKPREYINRKLSFCKTYSDSYLKYGCAFCVERFVLKVTLQAHIFHFHSDEVGVNRSSTIASVDTSFDASVDSSMNTADTFDTTNNESDLGQSRQVKGNQKDLKSEKPVKKLRQTTMNEFLSVSNKKDNDTETSTPTAITKSTVAQEENDVYQMSASSNTPRTVKDANGTPTRKKSIRGNENSDEAIMASLEDSSDNESVTPRDRYPLRKSRGNYLRNFLTERAMSTRSYRRTTSIGGEDFETTDYFLRPSRTAARNSHLFSSNYGYSDSFDSDDEYNFMLSSRNLRGRSSFTKAIERELKFIYQCREFSIPLVRCDYDQNHVDGENSETSSQCSTDSVGSSNCSEILDRLDDVKKEKSNPEYENHVVEVSPDTVLDHDLPQINSSRLEEFLTDCNKSVKSENSQSQFFSQEDIKTIRSFNVPNVVLKEVEIRLVRSPHIDNLATQTNTSQASTSDDRTTFVCKICEMGFPSKYDKKRHVKSIHTIYMSSICGARYTIKDKLIEHYMQQHVATKQNKCYVCYASCFSKVLLKQHLTLHCIKALRLPNDTLPVDVDLKCDEIYRNNTCLICGQTFWLHSGLEAHKKTCKAPTTQVPPEVSDTVSNDNQHIKSPRATVASGPFTHSRVKNRTTQNKYRSSANVNGTVFSSMTEPPTFLNPYSVNQKLDTLHQNTPQLEASDLSASDVIPQDEENGGIQGKRFPCDICGTRFQTYKTLWQHRRTYMDPPIEVCDVCGTAFATKRLLRKHFTSAHVHEISQTYQFHCNICNQGFFKKENLRIHELHLHYNKVHPLPQEWKNPDQQCKTNTMCNICNLIFETHDRFIEHSMYYYKSQKFPCSFCGKTFEGMYMLHHHTKLTHYPEETRKSYCYVCNVCGEGFKHQSHFHAHKLHVHGKEEGTVKSTSSHINHPVKDASEVLEEKVAVNQESSAFTLPDLTRCKICHIKCISDIEMRMHEAEFSNDGYPCDKCSRKCRTMPLLQRHKYLTHFNSTLNIGHKCTICNEVLLTVVALLCHNKHFHNVKDSDLSASSNTEKNSAGNQESEKLLNCTAGERRVDSNSNKPSSEATTEGILVCQTCQAKFVTVMELKDHIMELSNQGNHACDMCPRKFLKPLYLERHKCKHRVKSVGNFRYLCSVCKEGFITINGLISHDLHLHAQEIHSDLLNKSNQNEQNEADVCVGQTTINSSTNQPSSEQVEEDPAAGWMKIRNSMILATNVSSTSSSSNNQKLSRNILLPTQSETTPIDPLLKYSNPETAQKPLIIQCTVCSLRFDSSRNLTRHVLQYSNQGDYVCEVCGRRFSCPSRFRDHHRKHLSKDAQNLRYFCFECGERFQDPRSAHAHCVHFHGPQTRFGTGKNPVSTTAVLSTPNKNPTQTQQRTTGNLLITKPPEQSSGISNAGKNLTANNPMRNVVNNVNNSGKKSLLINTNNGKSLVNNRITVKKWSYFQPVSSGPSNQRNLSYDVVIDNPNSLPIEDRDPLAIDNTATDVELIVPNLSDMMNRHNLLQNNSSNNIIEITNGTSQIKNTNPSNETITYTCPICILEYSSLRLFQTHYRYVHANACATSAQQAMMMENDPIIHCVICNAPFTEEIDFKVHMDSVHMPRWNVVQNHDPNNSEQISQPLFPTQSLNRLVHEVSVSQGVEERKRKLEDIQSNTTPPPLKQLRLQVEDDVATIEPAVKQEPNDVTDTTDVTSKNTVSEDAPAPPDTTKIGKLKVRSFAKIVETLSSESANDNQLTVNNNQTNQPSVYGRTYARPKEPMGVIRYVPANRIFIAQTANLSQNSMYLP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -