Basic Information

Insect: Gonatopus flavifemur
Gene Symbol: RREB1
Assembly: GCA_018340375.1
Location: Contig3:4731349-4757133[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.012 1.7 9.6 0.1 1 23 39 61 39 61 0.96

2 16 0.00024 0.033 15.0 0.1 1 23 75 97 75 97 0.98

3 16 5.7e-06 0.00079 20.1 2.7 1 23 103 126 103 127 0.97

4 16 6.2 8.6e+02 1.1 0.3 1 23 287 311 287 311 0.86

5 16 0.055 7.6 7.5 3.0 2 23 317 339 317 339 0.95

6 16 8.2 1.1e+03 0.7 0.6 1 19 395 413 395 415 0.88

7 16 0.14 20 6.2 0.1 1 23 556 578 556 578 0.96

8 16 2.2e-05 0.003 18.3 0.3 1 23 587 609 587 609 0.98

9 16 0.00094 0.13 13.1 2.8 1 23 615 638 615 638 0.97

10 16 0.00035 0.048 14.5 3.0 1 23 1055 1078 1055 1078 0.97

11 16 0.00041 0.056 14.2 0.1 3 23 1380 1400 1378 1400 0.97

12 16 0.045 6.2 7.8 4.5 1 23 1406 1429 1406 1429 0.97

13 16 0.00084 0.12 13.2 1.4 1 23 1494 1518 1494 1518 0.97

14 16 2.1 2.8e+02 2.6 2.2 1 23 1612 1635 1612 1635 0.91

15 16 0.0085 1.2 10.1 0.4 2 23 1698 1719 1697 1719 0.94

16 16 1 1.4e+02 3.6 8.2 1 23 1725 1747 1725 1747 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.012	1.7	9.6	0.1	1	23	39	61	39	61	0.96
2	16	0.00024	0.033	15.0	0.1	1	23	75	97	75	97	0.98
3	16	5.7e-06	0.00079	20.1	2.7	1	23	103	126	103	127	0.97
4	16	6.2	8.6e+02	1.1	0.3	1	23	287	311	287	311	0.86
5	16	0.055	7.6	7.5	3.0	2	23	317	339	317	339	0.95
6	16	8.2	1.1e+03	0.7	0.6	1	19	395	413	395	415	0.88
7	16	0.14	20	6.2	0.1	1	23	556	578	556	578	0.96
8	16	2.2e-05	0.003	18.3	0.3	1	23	587	609	587	609	0.98
9	16	0.00094	0.13	13.1	2.8	1	23	615	638	615	638	0.97
10	16	0.00035	0.048	14.5	3.0	1	23	1055	1078	1055	1078	0.97
11	16	0.00041	0.056	14.2	0.1	3	23	1380	1400	1378	1400	0.97
12	16	0.045	6.2	7.8	4.5	1	23	1406	1429	1406	1429	0.97
13	16	0.00084	0.12	13.2	1.4	1	23	1494	1518	1494	1518	0.97
14	16	2.1	2.8e+02	2.6	2.2	1	23	1612	1635	1612	1635	0.91
15	16	0.0085	1.2	10.1	0.4	2	23	1698	1719	1697	1719	0.94
16	16	1	1.4e+02	3.6	8.2	1	23	1725	1747	1725	1747	0.98

Sequence Information

Coding Sequence: ATGGATTACTCTACCAAAGTTGCTGTTAAAAGTCATATCGATCAGGAACACGTTAATGAATCACAAGTTGATGATGCATCTCCTCCATCCAGTGTAGAACCATCGGAGAGTGGACATCCGTGTCCAGCATGTCCCACCATATTACCAAGCTCGCGCGAATTAACAAACCATTTACGCGGTCATAATTCTCCACGCAGCACCGACTGCAGCGGGGAGGAGGATTATTCCTGTGGAGTATGTCAAAAAGTTTTGAGTTCAGCCAGTTCTTTGGATCGCCACGTGCTCGTGCATTCTGGCGAACGACCATTCAAATGTAGATACTGTGAAATGGCGTTTACTACAAACGGAAATATGAATCGTCATTTGAGAACGGCGCATCATCACCACCACCATCACCATCATCATCATTCGCATCGGGATCGGAATTCAGCAGGACACTCACCGTCCCACAGTTATACCGACTCCGAAGGTGGTGGTAGTAGCGATTCCGAAAAGCCTCCCTCATTGAAACGTCGTCGACATCACGTCGATGACGAATACAACAATAACGAAATAGCCAAACGGAACTCATCTTCACCCTCGGAGGATAATTTACGCAACACGGACGAAGATCGTTTATTGGGGATCGGTGGTCGACGACGCGGTTGTTCACCACCGAACAATAACCATCGCAATAATCATCATCATAATCACATCAATCATCACACAGACAATATGAATTTGACGAAACGTAAATATCCAGACCATAGTAAGGACTCCGATACGCCACCTAGTCCACGGAAGCACAAAATAATGTTGAACGATTCGCGTACCGAGAGCACCAACGATAAAGGTACGGAAAATCACACTCCCATTACCCATACTTGTCCAGTTTGCGTTACGGAAGAATTTGCAACGGGCGCACTTTTGGAGGCTCATCTCGAACACAAACATCCCGACTTTCCAGCGAAATGTGATACTTGTAATCTTTCCTTCAAAAATCATCGTGTGCTCAATCTTCATCGGTTCATGATACATTTCTCCGATCGTTCAAATGGTAATGCTACACGAAATCTTCGCAATTCCGTTGTCGGTTTCAATGATTTGACTTTCGTAGATTTTTCCTCAGATAAGTTCCCGACCATAGCCCGTGCCGTGTGCGAACAGTCCTTGCATCGACCTCCATCAGGCGAAGTGACCAAATTTCAATGCTCCACGTGCCTACACGCTTTCCCATGTCGATCGGCTTTGGATGCACACGAGATTGATTGTGGCACGGCGGTGACCAACACCCAACAACAATTGGATCACCAATCGACGAGGCTTCGGGGCAAAGAGGAGCAGGAAGAGAACCAAGTGGAGGACGCTAAATCTCGTAGGGATGACTTTTTTGCAGGTCTAGATTTACAGAACAAAGCTGCTTTGGTGGAAGCGAAAGAAGGAAAAGATTTAGCCGATATCCAAAGTATCATTTCCGTGACGTCTGGACCCCCGATATTACAAAATTTTCCTCGTTCGGATGCGAGTACGCCGGAAAGTAATCTTATCAAGATTAATCCGACTGCTTCCATCGGTTCGTCCTCATCCGGTGGTTCCTCCGCCACTTTTTCCACTTCCGAATGTCACGAGGAAGAAGCGCAAGACGCTTTCGCCGCGGAATTCAGAAAAATGAAACTCAAAGGTGAATTTCCTTGTAGACTGTGCACCGCCATATTCCCTAATTTACGAGCCTTGAAAGGTCATAACCGAGCTCACATGGGTGTACCTCCTGGCATGCCTTATCCCTGTAACATGTGCCCATACACGAGCACGGACAAAGCTACTTTGGTTAGACATTTGAGATCTCACAATGGCGATAGACCATACGAATGCTCTCTTTGCAATTATGCTTTCACGACAAAAGCTAATTGCGAAAGACACGTGAGGAATCGTCATGGCAAACTCACGCGGGAGGATATCAAAAGTGTATTAATTTATCATCCAAATGAGGATTCGACCAACGATAATAGCGTAGAAAGGAACTCATCGAGATTGATTAAAGATGAAGTTCAAGCTCGGAAGAGTTTAGTTTATCCTCACGAACGCGAAGATCATCCACAACAACCATCGCAACTGTCACATTATTCGCCCGTACAATTGGAGGCGAAAACGGATATTCGAATAATAGAAGAAGCTAAATTACATAATCCTGGTTTACCCAACGCAACACCAAACTTCACACATATCAATCACTACGATAAATCGGAAACCTTTTCGTCGCGTGTGAGTTCTATCTTACCTCCCCCACCGCCTTTACCATTGGAGTTGTCTCAAAGAAACGCCGAAGAATCATTATCGATGGACACCCAAGATATGATGGCCAAAACGACGGATTATTCCAAGATCGAGGAAGATCTCGAGTCAAGATCATCGGAAGAAGAAAGCTTGTCTCTAGTCAGCGATACCAAATCAGATGCAGCACACCAAAGAATTCAAGCTAGTCCGATGAACTTGAAAAAAATTCCTATCGCCAATTCGAACGAAGATGGGCCCCTGGATCTGTCGATGGATGTCTTAGATCTGAGTAAAAAATCCAAAGACAAACAGAATCAAGAACTCACAAGTTCCGAATCATCTCAAGAACCATACGGTAAAGAACAAAAAGAACTTTACAGTGCGACGAGTCAACTTTTGCTAACTCAAGCTTTGCTCAAAGCAGGTCAACCACCGAATAATGACTCTCAGCAACAAGCTTTAGAGACGATTTACAATGCTCATCGTCTTTTGTACAGATCTTTTCCACCTGGAGTAGGTACGAGTTTGCTATCCCCTTACTTGTTCAATCCCCATGTTTTTGGACAAGATTTTTCGATGAAAGAACGACTCCAGAAAGAATTGGTACGAGGATTGCAGTTGACGAGCGGTGGCACGATCGTTGACCCTCCGCCTCTCGGTAGCGCCAGCTATGCCGCTGCCGCTGCAGCCGCTGCTTATTCCCAGGGTAGAGACATGTCCCTTCAATCCGCAACCGAACAAAATGATTATTCGAATTTAATGTCCTCAAAAATACCTCCGACCAAACCAATGGTGGTGCGAGAGAAAAGCGTCGATAGTAGCCCACCGTCGAACTCTGTTAAAATGGTGATCAAAAACGGAGTCCTCATGCCAAAACAAAAACAACGTAGATATCGGACCGAGAGGCCATTCACTTGCGAGCATTGTTCCGCAAGATTTACTTTGAGAAGTAACATGGAAAGGCATATAAAACAACAACACCCACAACATTGGAGTCAAAGACCCCGAGGTGGACATTCGACCAGAGGAAGACCCCCTTCCAGTCATTCCACGTTATTACAAAATCTCAATCAGCCTCCATCGTCCGGTCAAATATCTCAGTCGTATCCGAACATTCTTCCCAAAATGGAACAAAGAAACATTCAAGAATATGAGAAGCATTCTATTTCCGATCAGGTTAAATACGCGATTCTGGCGCAACAATTGAAAGCCAATAAACAAGAGGAAAACGACAGCGAAGAAGAACTTATAATCGACGAGGATCTCAATGAACATGACGATTATGAGTCTCAAGATCATCCCGAACGTACGACGAGTCTATTACGTGGACAATTGGAAGGACAAAATGAAACCAGAGAACACATTGCCAAAGTGAATTGCGTTCTCAACGGCAGTGACAGTTCAGACGCAATTGCCAATGATAACAGGAGACGAATGATATTCAACGATGATTCTAACAACAAGGAACAATCCGTTGGTCACAACAACGAAGATAACGGTTATGAGGATGACGAAGAGAATGAAAACGATAACGTCAACGATAATAACGAAGATAATCCACGCACCCAAGATCTAAGTATCAAAACGGAAACCGCACACGACGAACCAGATGATAAGAAGGATCCCACGGATCTGGCCAGTGTATCCGATATGTTGGAACAGGCTTCTCAACAATACCAACAATTCGCTCCACAGGATCCCAGCGACGAGGAAGGATTGGTTGCATCCACAAGCGATTGCAATAATTCCGGAAGCGAGGATAAATCTGATTCTTTGAACTCGGGTGGCAATTTCTCGAATCTATCCATGTCGAAAAAAAAGAAAAAGATCAAAAAGAAGAAGAAGAAAAAGTCAGCTTATTCGATGGCTCCCAACAGAGTGATTTGTCCGTTTTGTCAAAGACCTTTCCCTTGGTCGTCCTCATTGAGGAGACACATATTGACCCATACAGGACAAAAACCTTATCAATGTGATTATTGTTCTCTTCTATTTACCACCAAATCGAACTGTGATCGTCATCTTCTCAGAAAGCATAAAACGAATCCAGATAAAAATCGACGGGTTAGAAATTCGTTATCTCCGGAACCTTCAGGCTCAACTCCCCCGACAATTACCACAAACAATAATAACAATACCAGCAATAATAACAATAATAATACAAACAACAACAATAACAATAATATCAACAATAACACTTTCTCTATGAGAAACGTTCCAGAACGACCATATAAATGTAACCAATGTCCAAGTTCGACTTTTTCGACATTGGGAAATTTGAAAAAACATATATCAACGAAACATTCGCGAAGTAAAATCAAGTCAAGGTCGGAAACACCGTCGAACGATCCCCAAAACAGCCCGTTGGAATGTCAGAAGCAAAACGATCAAAGCGATTACGAGAGTCAATCCTCGAGCGTATCGGATAACATGTCGAGTCCTCCAGCGATGAATTCCTCAATGTCGAAATCGAATTCCAATTCGGTGGTACCCACCGGTAATCAGGATATCGCGGCGGTGGCGGCAGCAGCGCGTTCTCGTAGACCATCGCCCAGATCATCGCCAGGTCCTACCGACGTACCATTCAAATGTCACTTATGCGACAGCGGTTTTGCAGAGCGTATGGACTGTTTGGAACACATCAAAATCAACCACAAACGATCTTACGAGCAATTGGTCGCGAAAGGTGCCCTGGACATGGATTTAGAGATGACCGAGGATCAATCTTTGAATCCATCTTCTCTTCCTCCTCCGCCACCACCTCCACCTCCGGCGCCGCATCATCCGAGCGACGGTGAAGAAAAGAGAGGCAGATTTCCCGACTACAGCAACAGAAAGGTAGTGTGCGCTTTCTGCATGAGACGGTTCTGGTCTGCCGAGGATCTTCGTCGACACATGAGGACTCATACAGGAGAAAGGCCGTTTTCTTGCGATATATGTTGTAGAAGGTTCACCTTGAAACACAGCATGCTCCGTCATCGTAAAAAACACGAATCCGTGGATTCGACGATGTACGTGGGAACCAGCGGCGATGAAGAGAATACCCAGCCTCCCACAATATCGCTTAGAAGTCAGCAACATCAATCACAGCCCCCTGTGTCGACGACCATCAACAATTCCAGGATTCAAGAGAGAATCTCGTTACCCACTGTAGCGCCCGTGATACCAGGAGATGCTGCTCCCAGTGGGCTCATGAGATTCAATCCGTATGACAAACTAACCACCCTCACCGAGAAACTCACAAACATTCAAGAGAACGTTAACGCCAATGATATCAGTGAAAGTGCAGATAACGATCTTATTTCTAATTTATTGGGAATACGTGACAAAAGTATTATCGATCGAGTACTTCAAGCATCGGCGGACGACGCCGCTAAATTATTAGGTGTTAAGGAAAGTCACGAATGA
Protein Sequence: MDYSTKVAVKSHIDQEHVNESQVDDASPPSSVEPSESGHPCPACPTILPSSRELTNHLRGHNSPRSTDCSGEEDYSCGVCQKVLSSASSLDRHVLVHSGERPFKCRYCEMAFTTNGNMNRHLRTAHHHHHHHHHHHSHRDRNSAGHSPSHSYTDSEGGGSSDSEKPPSLKRRRHHVDDEYNNNEIAKRNSSSPSEDNLRNTDEDRLLGIGGRRRGCSPPNNNHRNNHHHNHINHHTDNMNLTKRKYPDHSKDSDTPPSPRKHKIMLNDSRTESTNDKGTENHTPITHTCPVCVTEEFATGALLEAHLEHKHPDFPAKCDTCNLSFKNHRVLNLHRFMIHFSDRSNGNATRNLRNSVVGFNDLTFVDFSSDKFPTIARAVCEQSLHRPPSGEVTKFQCSTCLHAFPCRSALDAHEIDCGTAVTNTQQQLDHQSTRLRGKEEQEENQVEDAKSRRDDFFAGLDLQNKAALVEAKEGKDLADIQSIISVTSGPPILQNFPRSDASTPESNLIKINPTASIGSSSSGGSSATFSTSECHEEEAQDAFAAEFRKMKLKGEFPCRLCTAIFPNLRALKGHNRAHMGVPPGMPYPCNMCPYTSTDKATLVRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLTREDIKSVLIYHPNEDSTNDNSVERNSSRLIKDEVQARKSLVYPHEREDHPQQPSQLSHYSPVQLEAKTDIRIIEEAKLHNPGLPNATPNFTHINHYDKSETFSSRVSSILPPPPPLPLELSQRNAEESLSMDTQDMMAKTTDYSKIEEDLESRSSEEESLSLVSDTKSDAAHQRIQASPMNLKKIPIANSNEDGPLDLSMDVLDLSKKSKDKQNQELTSSESSQEPYGKEQKELYSATSQLLLTQALLKAGQPPNNDSQQQALETIYNAHRLLYRSFPPGVGTSLLSPYLFNPHVFGQDFSMKERLQKELVRGLQLTSGGTIVDPPPLGSASYAAAAAAAAYSQGRDMSLQSATEQNDYSNLMSSKIPPTKPMVVREKSVDSSPPSNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPSSHSTLLQNLNQPPSSGQISQSYPNILPKMEQRNIQEYEKHSISDQVKYAILAQQLKANKQEENDSEEELIIDEDLNEHDDYESQDHPERTTSLLRGQLEGQNETREHIAKVNCVLNGSDSSDAIANDNRRRMIFNDDSNNKEQSVGHNNEDNGYEDDEENENDNVNDNNEDNPRTQDLSIKTETAHDEPDDKKDPTDLASVSDMLEQASQQYQQFAPQDPSDEEGLVASTSDCNNSGSEDKSDSLNSGGNFSNLSMSKKKKKIKKKKKKKSAYSMAPNRVICPFCQRPFPWSSSLRRHILTHTGQKPYQCDYCSLLFTTKSNCDRHLLRKHKTNPDKNRRVRNSLSPEPSGSTPPTITTNNNNNTSNNNNNNTNNNNNNNINNNTFSMRNVPERPYKCNQCPSSTFSTLGNLKKHISTKHSRSKIKSRSETPSNDPQNSPLECQKQNDQSDYESQSSSVSDNMSSPPAMNSSMSKSNSNSVVPTGNQDIAAVAAAARSRRPSPRSSPGPTDVPFKCHLCDSGFAERMDCLEHIKINHKRSYEQLVAKGALDMDLEMTEDQSLNPSSLPPPPPPPPPAPHHPSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESVDSTMYVGTSGDEENTQPPTISLRSQQHQSQPPVSTTINNSRIQERISLPTVAPVIPGDAAPSGLMRFNPYDKLTTLTEKLTNIQENVNANDISESADNDLISNLLGIRDKSIIDRVLQASADDAAKLLGVKESHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -