Gfla003795.1
Basic Information
- Insect
- Gonatopus flavifemur
- Gene Symbol
- HIVEP1
- Assembly
- GCA_018340375.1
- Location
- Contig2:16917321-16954212[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 4.9e-05 0.0069 17.1 0.6 1 23 111 133 111 133 0.98 2 8 0.023 3.2 8.7 2.0 1 21 139 159 139 163 0.86 3 8 0.014 2 9.4 0.1 1 21 372 392 372 393 0.95 4 8 1.1e-06 0.00015 22.3 1.6 1 23 1127 1149 1127 1149 0.99 5 8 1.2e-05 0.0017 19.0 4.3 1 23 1155 1179 1155 1179 0.92 6 8 1.5e-06 0.00021 21.9 0.1 2 23 1824 1845 1823 1845 0.97 7 8 0.0006 0.083 13.7 1.8 1 23 1851 1875 1851 1875 0.92 8 8 0.001 0.14 13.0 3.3 1 23 1896 1920 1896 1920 0.93
Sequence Information
- Coding Sequence
- ATGACGACAGAGACCCACACTGTGGCGATGACAGATCCACAGTTGACCAACAATAACAACAATAATAACAACAATAACAATAACAACAACGATGGAGAGCCAAAGTACCTGCACAAGAAGTTCAAAAAGATGGCAACAGCCGAAATGCCAAAGGTGGAAGCGAAGAAAGAACTCACTCCCCCCAACAATATTGTACCACTGGAGGTTAATAAGAAGAAAGAATCGTCAAAGGATCAAGCGATCAAGGCGGACGCAACTCCAGAAAATGATACCCCCACAACTACCACCGCATCTACGGCTGAACCAGCTCCGGAATCCAGAAAGAGCGGCTACGTGTGTCCTTACTGTAAACTTTCTTGTGCAAAGCCAAGCGTTTTGCAAAAGCACATCAGAGCTCATACGAATGAAAGGCCCTATCCCTGCGTGCCCTGTGGATTTGCCTTCAAAACTAGATCCAATCTCTATAAACACTGCAGGTCAAGGGCTCACGCTCTCAAAACAGAGGGTGGTGAAACAGGCAAGGTCTCCGAAGAATCTGACATAAGTCTTTCGGATAGTGCTAGTAATGGAACGGGTACACCACCTCCACCCCCAGCTTCAACGCCTATCGCCTCCGTCCCAGCTGCTACTACCACAGTATCAACTACCCTGTCCACTTTGAAGACCGTGAAAACAGGGAAAATTTACAAGCCAAAATTCCATACCGCGTTACAATGTGTGAATAATGATCCTGAGATATCTTTATCGAATTCTTCTAACAGCTGCTCTTCCACCTCAACGGTTTCAAGTACAAAACCAAATGTGGAGCAAGTGCAAGAACATATTGACAGAATTATAACAGACAACCAGGCAATTGTTGATGTGGTGGATCCGCGATTACATAAATTAATACATCGACAACAGAGTTTGATAGAAACAAAACACCCCGACCAACCACTGAATCTTTCATCCATCGAAGAAGCTGCTACGCGAAAACGTTGTTATAGTGAAAGTTTCACCCAGGAGAATAGAGACCCACTTCAGAATCAAGAAAGTTCTATCATCAAAGATTTACTTCTTAAAACTAGAAATTCTAATTCTGATTGTACCCGACCAGTTGAAAACAATGAACACTTTGTATGTCTTTCCTGTAATATAGCGTATACAAGTATAGATAATCTAGAAGCTCATCGAAGATATTACTGTAAGGGTATTTTGAGCCCTAAACGGTTGGATTATCAAATAGATATGGAGAGAAAGGCTGAACCCGATTTTGACAGTAAGTCAAACGATTATTATACGAGCCTTCAACCGTTACCTTCTCCTGGCCCTCTTTTAGGTAATACAAGACTTGTGGATGCGTACGCGCCACCTACAAAAAAGCAAAGATCTCCAGAATCGGTGCCAACTACTTTAAGATCCTTAGAAGAATTATCTAAATATCCTAGACCAAATTCTTTACAAATGTTTGGCGGTGAAGTTAGAATATTGGATAATACTGGCGAAACTAAGACTATGAGGATCGAGCCACGCCAAACGAATTCTCCTTCCTGCGAGCATATAGGGAGCAGCAAGTGTGTCACGTCCGAGACTGCATCTATAGTAGTGAGATCGGGTCTTCATTCGGGTGGTACGATGGTTCACAAACCTCCTGCTACCACGTCAGTCAGTACATCAAGCTCTTCTATATCTTTACCAAATACACCTAAAATTCTAGCATCCATTATACCAAACATATCAACTCCAAATATCGCTCCAACGATGTCATGTTATAATAATTATTTAGAATCGCCACATTTGAATGCTTTGACGAGCATTACTGCCTATAATCCTCTGACCTTACCACAAGCAGGTATCACAAGTATTCTTCACGGTGGTAAGGTTATACCCTACGTACCAGGAATGCCGGGACCACACACTTTATCCGCAACACCGACCATAGACATATCACCGAATATAAGATCCGGTGACGTTGGATACAAGGTGATACCTGGTTTGCCAGGCTTGCACATGATTCCTCAACAACCTTTAGATCTGGCCAGCCCTGTGAAACCTCCGACTCCGATATCTGGAATAGGTTTAAGTCAACCATTGGATCTCGTCAGTCCGGCCAAGGATTCCAAGTTGAATTTTAAAACTCCGAACGATGGGTTAAGAAGTCCTAAAGTTCCTAGTGTTAAAGTTGAACAAAACTCAACTGAGAACTACAGAAAAAGAATAATCCCTTCCAGCGAATTGAATAAACCAGAGCTCGATCGTCATATCAAAAACAACGTCGCGAAGTATAAAAATGTAGACAACTGGGACAGAAGAGAATTCAGTTACCAAGAAGCGAATTCTAAGTTGGAAAAACCTTTCAGTGCTAACGGTATTGATTCTTCGACAAATTCTTTCAATAAAGTTGGATTCTTTTCTAAAACCGCTGTTGAAAGTAGTAGTAGTAGTAATAATAATAGTAGTAGTAATAGTAGTAGTAGTAATAATATTTGTAACAATGGTAGTATTAACAGTAGAAAGAGACCTTCCGATTGGAACGTTGGAGAGTTAGAAGCGATAAAAACGACGGTGGTCGAAATACCTAGAAACAGTCCTGTATTGAAATACGATTCCACTCCACCTCCTTACGAAAATGGGCGAATGAAAATTAATTTCTCTGAGGGTAGTAAAACCAAAGTGATGGAAAATTATAACAATTTAACGAGTGGAAATAAAACGAAACCTGATTGTTTACCACAATCTCCAGTGATACTTGTGAATTTGGATTCTTCCAAGACAGAAGTGCCAAGTAAAAGTTGCGTAGAACTATTAGTTGTTAAGACAGATAAGTCTGAATCAAAGTCGCCCAAGAATTGTGACTACACCAATAGTAGTAAATTTCTGAGACCCACGTCTCTACCCCTGAAGCCTGGTACATTTACACCGAAAAAACATCATGGAATAACACCTACGGCCAATACTCTTCCTCTAATCAGTCCTGAAACTCCCAGACCCAGGAAGTCTTATGGGCAACTGTATTTGAATGGTCATGCCTATACATATCTTGGACTAAAGTGCTCGACCAGAGTCTTTTATTGCACTTTGAACAGACCTCAACCTATGTACGTTACTCAACAGCATGGTTTATCTATGTACTCTAATTGGAAGATATGCAAAGAAGCCCCACCGGATCTCGATATGGCTCATTACGATTCTAGACACAGACCTCTCAATTATACAATTGCTTGGAAAAAGCAAGAAGATATATTAACACATTCTTCACAAAGGCCAACAACTCCAACTAGTCCTGACAGTGGCATGGAAAGTGATATACAAGAAAAAACTAAAAGAGTGAAAATATTTGATGGAGGTTTCGAAAGTAACGAAGATTATACATATGTTAGAGGCAGAGGTCGAGGTCGATACGTTTGCGAAGAATGTGGAATTAGATGTAAAAAGCCATCTATGCTGAAGAAACATATCAGAACTCATACGGATGTGAGACCTTACACTTGTAAACATTGCGCCTTCAGTTTTAAAACGAAAGGGAACCTCACCAAGCACATGAAGTCCAAAGCACATTATAAAAAATGTGTCGAGTTGGGTGTAGTACCGGTACCTACAACAGTTTGCGATGAAAATATCGATAAGGAGGCGATTGCTTATTTAGCAGCAGGTGGGAATACAGAAGAGTCCTCGGAAGAGGAAGACGATACCGAAGGAGAAGAAAGTGAAGAATCCGGCAGCGAGGAACACGAAGCAGCGCAAAGTCTTCTAAGCCTGTCTCAACGTAATTCCAATAATAGATTGCCAGGTTTATTACCTTCGGGAAGACCAACAACTTATCCTTACACGTTAAGTTTCTCGACAACGACAACCACTCCGGTTACAGTGAGTTCATCGACGACGACGACAACAACAACAACCAATCCCACCTCTACGCTGAACAGTCAAAATACTACTAGCAGCACTCCAAGCACAACGGTCATTCAAAACGAAATGTCTCATCGTTATTATTTCCCTTCCAATCGATCAACTCAAGAAGGATCGAGAACAAGCGTCATACATTCTTCCAAAAAAGATGAATGTGAAACCGAATCGAGTTATTCGAAGCATCACTTTTCTCAACCCATGGATCTTACGACCAAACAAATCACGACGCAATGTCCGATATTGCAAAGAGCCAAACCAACGGACATCTTAACACCCGTATCCGAACCAATTTTATTACAAACGATAGTTCAAACTATGGAAAGATTACCAATACAGGGAAGAGAATGGAAACCAGATGCCGAAGGTCATATGTTGCAAGCGTATCTCACCGAAAGACATGTTATGGATAGTAAAATTAAACAGCAGTACCGGGTGGGGAATACGAAGAACGTTAAAGAAAATCAAGAAGTGTACCTGAATCATCAAGATCCTAACAGACCAAGAAATCTCGAACCAATCATTGTACCTACATTGACGTACTCTGATCCCAATAGTAAGATACAGCACCCTGTTATAGAATCAAGAATAAAAAATCCTACGAAAATAAATAATAGTGCGGATCAAAACAATATAAATAACGAGATTAGATCTTTGGATTTCGAGTTCAAAGAAAAGAATAGTATACTATTATCCGATAAAGAACATCCTGAACGAAATTTAACCAGCCCTATTAACAACTCGAGGATCAATCACAGTCCCATCATCGTGCATAATAATCCTGAAAGGGTGAATTATATTATAAACCCATCAAATATCGAATCTCCAAAGAATTTTAATTTGGAAATGAATAGAATTACGACGATCAGCGAAATCGATAGAAGTTCAATGTTCAATACAATGAAAATGATGAGCGAGATAGAGAAGACGAGAGAGTGTCATGATATCAGATCCTCATCCGCGGATCTCAGAATACAAAGTCCTCGGAATATTGATGTAAGATCACCCGGTAGACCAACTCAAGAGTATAGATCTCAGAGTCAAGAAGTGAGACCGATGAATCAAGATTTCAAGCAACCAGGGCAGGAAATGAGACCTCCTAGTTTAGAATTGAAACCAATAACGACGCATGATATTAGAATGAATCAGGATATATCGGTATCTCACATGAACACAGAGATGCGCCCCAACGCTAATTCTGATATCAGACCCCCGAGTAGAGACATGCGAGTATTACCAGAATACAGATCTCAACCTCAAGAGTCTAGATCGAATTTTGAAGTTCTAACACCAGTGATACACGACCCTTCTAAATTACAAGACATTTCGAGACCTCAGAATAACATTGAGATCAGAAATTTGGATCGCGTTGATATCAAATTCCCCGTTGAAATGACAAAACAGTGTGCCCCGGAGAATCTGAAGCATTCTGTCGTACCTCGTAAAATGGTTGTTGGAAGTCCAGGATTCAGATCTCCATCTCCAACTGTGGGAGGTGCAAAGCCACAAGCGGAATTTCTACAGCCATCCAGTGGACCGACGCCCAACTATGTCAGTTACAGTGTGACAGAAGATGGCAGAAGCGTGTGTGGAATTTGCAACAAAGTGTTCAGCAAGCCTAGTCAGTTAAGATTGCATATCAATATTCACTATTTCGAACGGCCATTCCGATGTGAAAGTTGCGCAGTTTCGTTCAGAACGAAAGGTCATCTTACTAAACACGAAAGATCCGTTTCACACCATAACAAGGTTAGTATGACTTCTACGTTTGGAGCAGCTACCACGAGCAATCCTAGACCTTTCAAATGTACAGACTGCAAAATAGCATTCAGAATACATGGACATTTGGCCAAACACTTGCGTAGTAAAATGCATATTATGAAATTAGAATGTTTGGGTAAACTGCCATTCGGAACTTACGCGGAAATGGAGAGATCTGGGGTTAATCTGAACGATATTGACACCACGGACTGTGATAATAGCCTAGCTAGTCTTCAGATACTGGCTCAGAGGCTCTGTGAGAAAGATCCTAATAAAATGGGACAATGGGATTCAGAAACAGTCCCTAATCAAACGGTCAGTGGAGGTGACACCTCTTCAGACGAAGGTGAGCCTATAGCACAGCATGTGATACATCAATATCCTGTTAAAGTGACTACAGATGCAGATGCGTCTAAATCATATCACATGACAGTATCCAATGAAGAGCCACAGTCCTTTAATGACGTTCATGTTGGTAATTCTCAGTTTAATCAACAACCGCCGCAAAGACGTGAATACAATATGGCAGAGCGACCAAAACAATCTGTAATCTCCACCGAGGAAACAAGAAAAGAGGACAATTCGCAATCGTACAAGTGCCAAGTTTGTGCTGTGTCTATGCACACGGTGAATGAATTGCAGGTACATTGTTTCGTTGAACACAATATTGAAATGGATTCTAGTACAAATAAGCACGGTGATAGAAATACAAACGAGTTTAGGGAGAAAGAGAATACTCAGAAAAGAGCCACCGAAGATTCGAATATCATCAAAGAAAGTCATAATGGAAACAAAGCTGATGATACGTAG
- Protein Sequence
- MTTETHTVAMTDPQLTNNNNNNNNNNNNNNDGEPKYLHKKFKKMATAEMPKVEAKKELTPPNNIVPLEVNKKKESSKDQAIKADATPENDTPTTTTASTAEPAPESRKSGYVCPYCKLSCAKPSVLQKHIRAHTNERPYPCVPCGFAFKTRSNLYKHCRSRAHALKTEGGETGKVSEESDISLSDSASNGTGTPPPPPASTPIASVPAATTTVSTTLSTLKTVKTGKIYKPKFHTALQCVNNDPEISLSNSSNSCSSTSTVSSTKPNVEQVQEHIDRIITDNQAIVDVVDPRLHKLIHRQQSLIETKHPDQPLNLSSIEEAATRKRCYSESFTQENRDPLQNQESSIIKDLLLKTRNSNSDCTRPVENNEHFVCLSCNIAYTSIDNLEAHRRYYCKGILSPKRLDYQIDMERKAEPDFDSKSNDYYTSLQPLPSPGPLLGNTRLVDAYAPPTKKQRSPESVPTTLRSLEELSKYPRPNSLQMFGGEVRILDNTGETKTMRIEPRQTNSPSCEHIGSSKCVTSETASIVVRSGLHSGGTMVHKPPATTSVSTSSSSISLPNTPKILASIIPNISTPNIAPTMSCYNNYLESPHLNALTSITAYNPLTLPQAGITSILHGGKVIPYVPGMPGPHTLSATPTIDISPNIRSGDVGYKVIPGLPGLHMIPQQPLDLASPVKPPTPISGIGLSQPLDLVSPAKDSKLNFKTPNDGLRSPKVPSVKVEQNSTENYRKRIIPSSELNKPELDRHIKNNVAKYKNVDNWDRREFSYQEANSKLEKPFSANGIDSSTNSFNKVGFFSKTAVESSSSSNNNSSSNSSSSNNICNNGSINSRKRPSDWNVGELEAIKTTVVEIPRNSPVLKYDSTPPPYENGRMKINFSEGSKTKVMENYNNLTSGNKTKPDCLPQSPVILVNLDSSKTEVPSKSCVELLVVKTDKSESKSPKNCDYTNSSKFLRPTSLPLKPGTFTPKKHHGITPTANTLPLISPETPRPRKSYGQLYLNGHAYTYLGLKCSTRVFYCTLNRPQPMYVTQQHGLSMYSNWKICKEAPPDLDMAHYDSRHRPLNYTIAWKKQEDILTHSSQRPTTPTSPDSGMESDIQEKTKRVKIFDGGFESNEDYTYVRGRGRGRYVCEECGIRCKKPSMLKKHIRTHTDVRPYTCKHCAFSFKTKGNLTKHMKSKAHYKKCVELGVVPVPTTVCDENIDKEAIAYLAAGGNTEESSEEEDDTEGEESEESGSEEHEAAQSLLSLSQRNSNNRLPGLLPSGRPTTYPYTLSFSTTTTTPVTVSSSTTTTTTTTNPTSTLNSQNTTSSTPSTTVIQNEMSHRYYFPSNRSTQEGSRTSVIHSSKKDECETESSYSKHHFSQPMDLTTKQITTQCPILQRAKPTDILTPVSEPILLQTIVQTMERLPIQGREWKPDAEGHMLQAYLTERHVMDSKIKQQYRVGNTKNVKENQEVYLNHQDPNRPRNLEPIIVPTLTYSDPNSKIQHPVIESRIKNPTKINNSADQNNINNEIRSLDFEFKEKNSILLSDKEHPERNLTSPINNSRINHSPIIVHNNPERVNYIINPSNIESPKNFNLEMNRITTISEIDRSSMFNTMKMMSEIEKTRECHDIRSSSADLRIQSPRNIDVRSPGRPTQEYRSQSQEVRPMNQDFKQPGQEMRPPSLELKPITTHDIRMNQDISVSHMNTEMRPNANSDIRPPSRDMRVLPEYRSQPQESRSNFEVLTPVIHDPSKLQDISRPQNNIEIRNLDRVDIKFPVEMTKQCAPENLKHSVVPRKMVVGSPGFRSPSPTVGGAKPQAEFLQPSSGPTPNYVSYSVTEDGRSVCGICNKVFSKPSQLRLHINIHYFERPFRCESCAVSFRTKGHLTKHERSVSHHNKVSMTSTFGAATTSNPRPFKCTDCKIAFRIHGHLAKHLRSKMHIMKLECLGKLPFGTYAEMERSGVNLNDIDTTDCDNSLASLQILAQRLCEKDPNKMGQWDSETVPNQTVSGGDTSSDEGEPIAQHVIHQYPVKVTTDADASKSYHMTVSNEEPQSFNDVHVGNSQFNQQPPQRREYNMAERPKQSVISTEETRKEDNSQSYKCQVCAVSMHTVNELQVHCFVEHNIEMDSSTNKHGDRNTNEFREKENTQKRATEDSNIIKESHNGNKADDT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -