Basic Information

Gene Symbol
ZBTB47
Assembly
GCA_018340375.1
Location
Contig6:20516265-20532686[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 1.3 1.9e+02 3.2 3.7 2 23 290 312 289 312 0.97
2 21 0.0017 0.23 12.3 1.3 1 23 360 382 360 382 0.98
3 21 0.014 1.9 9.4 0.5 1 23 431 453 431 453 0.96
4 21 0.0021 0.29 12.0 0.1 1 20 505 524 505 526 0.94
5 21 8.3 1.1e+03 0.7 2.1 1 22 538 559 538 561 0.77
6 21 0.031 4.3 8.3 0.9 2 23 567 588 566 588 0.95
7 21 0.034 4.7 8.2 2.1 1 23 628 650 628 650 0.96
8 21 0.00052 0.072 13.9 0.1 1 23 656 678 656 678 0.97
9 21 5.7e-05 0.0079 16.9 0.3 2 23 719 741 719 741 0.96
10 21 0.02 2.8 8.9 1.0 1 23 747 770 747 770 0.94
11 21 5e-05 0.0069 17.1 0.1 2 23 779 801 778 801 0.95
12 21 0.00028 0.039 14.7 0.1 1 23 810 832 810 832 0.95
13 21 1.2 1.7e+02 3.3 0.2 2 20 888 906 887 906 0.93
14 21 0.00015 0.021 15.6 0.1 2 23 926 947 925 947 0.96
15 21 0.074 10 7.1 5.5 1 23 961 983 961 983 0.96
16 21 0.00021 0.029 15.2 1.9 1 23 1005 1028 1005 1028 0.94
17 21 0.018 2.4 9.1 1.3 2 23 1085 1107 1084 1107 0.95
18 21 0.0028 0.38 11.6 0.2 3 23 1149 1170 1148 1170 0.91
19 21 0.00086 0.12 13.2 0.7 1 23 1176 1200 1176 1200 0.97
20 21 0.1 14 6.7 0.8 1 23 1205 1228 1205 1228 0.96
21 21 0.032 4.5 8.3 0.6 3 23 1259 1280 1258 1280 0.94

Sequence Information

Coding Sequence
ATGGTGGAAATTGTCGAACTGCAAAATGTGGAAGACGTTTGCAGGTTGTGTTTGTCGCCGGACGAGCCTAAATCTTCGATCTTCGGAGTTGAGGGTTCCGTGGTCCCACTGGTTGACAAAATACAAGCTTGTCTATCCATACAGATCAAATCTACCGATAAATTGTCCAAGTTGATTTGTAAGGAGTGCATACGGAATGTCAATCAATGGCATAATTATAAGGAAACGTGCCTGCAGTCTCAGGATAAACTTCGAAAATGGCTAGCACGTCAAACTCAGTCGGCTGCTCCAATGGTACGCGTGAAGGAAGAACCTGTGGATATAGATTTCTGCGAAGACAACATTGAAATTCTATCGGAGTCCACTGAATTAACCGAATCTCGGACAGGAGAGAATCAATTGAACGCAGGGGAGAAACGAAACGCCAACGATAGAATGCGGATTGGCGAATCGAGCACCGCCACTTCCAGCCCCGTGCAGATCGAAGTTACGGACAAAGAACCAAGAAATTCATTACAAGTGCAAGTGTTGAGCGACGATGAGGCTAAAAGCACCCGCGCCATGCGTAAACGAAAAACCAGCGAAAAACTCGTGGCTGAGAAGGGAAGACTCAAAGAGAAAGAACTGCGTATCAAGAACGAACCGCAAGACGATTACGATACCGATTGTACCGTAGAAATAGAATCCGTAACTGAAAATGACTTGATGTCGAGTTCCGGGGCGACCGCAACTTCCGCTGGGCAAGAAGATCGAGTGATGGAGGCGGATTCCACTCAAAAGTCAAGCGCCACCGCCTCGTCCGCGAATAAGAAAAAGTTGAGACGCGGACCGCACACGCATTTCCGAGGAGCCCGACTTTTTAAGAAGAAATGCGCCTATTGTCGCATCAATTTACATTCGAAATGGTCGTACAGTCAACATATGAAGAGATTCCACAGTCAAGCTACGGAAGAGAATAGTTCAAACGCGGGACAAGATTACGAGATGATCGAAGACGTCGAGGAGGAATTGAACAGTATGGAGAAAGATGCTCCCTTGACTCAAGTTCAACAGAATATTATTTCTCAATTGAAAACCTTTAGTTGTTACGAATGTCAGCAATCGTTCCCCGATAGAAGAAGTACTTTGAATCACATTCGTCAGCACATGCCCGATTTGCGACCTCATTGTTGTATCGCTTGTCTAACCGAGTTCCCCGACGCAGCGATGTATAAAATACATTGCGAAGCATCCTTCGAATGCGCTATGAAAATTGCTTTGGTCGTACCCAAACAGGGGGTGGAAAAGTACTTCATTTGTAATATGTGCTTGAAACCGTTGAACAACAGGAAGGAATTGTTGAGTCATTTATCTCAACATTCGGACAAGCAGTACGAGGAATTGATGTCACCCGTGAGATCACCTCCCAAGCTACAACCAATGACTTCCCTGACGTCACCGAAAATACTACATCACGCGAGATCGCAAATTCATATTCCAAGCCCTTACAGAAACGGGGATCCCGCTCATAATCACGTGTGCGATTTGTGCGGTATGATTTACAGATACAAACCAAACTTGGTGAAACATCGAGAGCTTTGCGAAAGAATTTCCCCGGACGTGAGAACCTCGTACAGATGCGTGAACTGTGGCATGACATATCTCGTATTCAAAAAGTTCCATTCTCACATAACGCAAGACCACAAGAAAAAGGATTTGGTTTGTTCGAAATGCTTCGCCAAATTTAAAGAACCCAGCGACTATTTGGCCCACCACGAACAACATCGTACGACGGGTAACAAGAAATCCTTCGATACTAACTTTTCTATTAAAAAATCTGACCATTCGCAAGAGATCCACAAAGACGACGGGAGCAGCAGTAGCGGCTGTACGATGCCGAAATTCTGTTGCGCTTTGTGTAGTCAACAATTCCAAACCAAGGCCGAATTGAGTGAACACAGGAATCTACATTTGAAGGTGAAGATTTATTCTTGCGTGATCTGTCGAAGTATGTTCAGCAGCGCGGGTGCGTTGGAGATACACATGAAGGATCACGGAATCGAGGATCCCAACGAGAGAAACGCGAACAGCTCTTGCGTGGAGTACGCTAGAATAGACGAAAATTCTCAAGACGCCAATACTTCGGTGACCTCGGATCCCGGGGGCAAGACAAACGAGTGCGAAACGTGTGGCAAACTCTTCTCGAATATGGCAAACGTTAAGAGACATATTAGAAATGTTCATGGAAACGGTAGCGGATTTCCGTGCCTCGAATGCCCTCTTACCTTCAAAACTAAAGAATTGTGTAATCAACATGCAAAAATCGAACACAATCAAACAACTAAAACGTTGCTCCCTTGTCCACAGTGTCCAAAGAGTTTTGTTTTCCAAGCAAACCTGGATCTCCATTATCGGAACGTTCATAGTAATGACGACGAGGAGAAGAGATACGATTGCAATATATGTGGTAAAATGTTCATGGAAGAGGCGTCTTTGAAGATACACAAGAGCTGGCATAGTCGAGCCAATTCCAAGTACAGTTTGCCAAATATGTATCCGACGAGACAAATGTCTATGAACGAACAACCGCCGTTGTCCCTTGGGGAAATGAGCCCGGAGAAACCGGCCAAAGCGAGAAAATCCTTCCCCAATCGTCCACCCCCGAAACCCGAAGGCGGATTGCAGTGTCAGGTATGCGACGATAGATTCTTCGAAGTTACGGAATTGAGGAAACACTTATGGGATGTTCACTGTGCGCGCAACAAACCGGAAAAAAGTTTCTCCGGGGATGAGTTGCAATGCGAGCTATGCACCAACGTGTTTCCCGATCAGGAAACATTGAAAGTACATATGCAATGGCATAAAGCGAATCCGATTCTAAGTGATTTACATAAAGAAACCTTTCCCTGCGATATATGTCACAAACATTATAGTTCAAAGAAAATATTGTACAATCATAAAAAACTTCACAAAGTCACTTCGATGGTCAATATGAAATTCCACTCGTTGGTAAGGAAACCGTTAGGAAATCATTACACCTGTACGATTTGTCGTAAGATATTTGCTAGTTTTCAATCGTTGAAACGTCATAGATACAACGTTCACGGTGACCTTAACGCCTTAGAGCCTCCTCCCATGATACCAATTCACAATAAACAACAGCACGTACCTTTCGAGGAACCGATGTTCAAGAAGCAAAGATTCGATATGGAGGAAACCCTGAAAATGCCTTTACCGGTAAACGCTGCCGGCGCGACCGGTAAAAAACCTGTCATGTGTCACGTGTGTAAGAAATTATTCGCCAACATGAGCGTTTTGTATAAACACAAACAAATCATGCACAAACCTTCCTTGCACAAGCCGCCAGTATTTTCAAATAAAATGATAAGCGTTCCGAAAGCCGCGAGTTCGAATTCGCAAAGCGATTACGTTCCCCTGCAGAGTAGAGACGGCAAAGGAGTGGCGTGTAACGTGTGCGGTAAACAGTTCCCAGGACTGCCAAATTTGAAACAACATTTCGTTAAACAACACAAGAGACCTCCGAAATTTAAATGTCAATTCGAGAGTTGTCGTATGGCCTTCCCAACTCCGACGAATTTGAAGAATCACGAGATGACTCACGTGAGCATGATGTATAGTTGTTTGCTCTGCGATCGACATGTATTTAACAAAGGTGCCATGTCGGATCACATGTATTCGGTTCATAAAACAATTTACGACGTCGATACCAATAAAAACTTCCACAGGGAAATTGATCTGACCTCGTACGTCGTGGCAGGAGCGGTTGGATCCTTCTGTCCTATATGTAAAATTAAATATCCAAATAATCGAGCGATGAAGATACATTATTTCAAATTCCACGATAAAGCTAACTACACTCCCGCTTCTCCCGCCGCCAACACCGAATCCGTCGCCGAAGAGATGTCCTAA
Protein Sequence
MVEIVELQNVEDVCRLCLSPDEPKSSIFGVEGSVVPLVDKIQACLSIQIKSTDKLSKLICKECIRNVNQWHNYKETCLQSQDKLRKWLARQTQSAAPMVRVKEEPVDIDFCEDNIEILSESTELTESRTGENQLNAGEKRNANDRMRIGESSTATSSPVQIEVTDKEPRNSLQVQVLSDDEAKSTRAMRKRKTSEKLVAEKGRLKEKELRIKNEPQDDYDTDCTVEIESVTENDLMSSSGATATSAGQEDRVMEADSTQKSSATASSANKKKLRRGPHTHFRGARLFKKKCAYCRINLHSKWSYSQHMKRFHSQATEENSSNAGQDYEMIEDVEEELNSMEKDAPLTQVQQNIISQLKTFSCYECQQSFPDRRSTLNHIRQHMPDLRPHCCIACLTEFPDAAMYKIHCEASFECAMKIALVVPKQGVEKYFICNMCLKPLNNRKELLSHLSQHSDKQYEELMSPVRSPPKLQPMTSLTSPKILHHARSQIHIPSPYRNGDPAHNHVCDLCGMIYRYKPNLVKHRELCERISPDVRTSYRCVNCGMTYLVFKKFHSHITQDHKKKDLVCSKCFAKFKEPSDYLAHHEQHRTTGNKKSFDTNFSIKKSDHSQEIHKDDGSSSSGCTMPKFCCALCSQQFQTKAELSEHRNLHLKVKIYSCVICRSMFSSAGALEIHMKDHGIEDPNERNANSSCVEYARIDENSQDANTSVTSDPGGKTNECETCGKLFSNMANVKRHIRNVHGNGSGFPCLECPLTFKTKELCNQHAKIEHNQTTKTLLPCPQCPKSFVFQANLDLHYRNVHSNDDEEKRYDCNICGKMFMEEASLKIHKSWHSRANSKYSLPNMYPTRQMSMNEQPPLSLGEMSPEKPAKARKSFPNRPPPKPEGGLQCQVCDDRFFEVTELRKHLWDVHCARNKPEKSFSGDELQCELCTNVFPDQETLKVHMQWHKANPILSDLHKETFPCDICHKHYSSKKILYNHKKLHKVTSMVNMKFHSLVRKPLGNHYTCTICRKIFASFQSLKRHRYNVHGDLNALEPPPMIPIHNKQQHVPFEEPMFKKQRFDMEETLKMPLPVNAAGATGKKPVMCHVCKKLFANMSVLYKHKQIMHKPSLHKPPVFSNKMISVPKAASSNSQSDYVPLQSRDGKGVACNVCGKQFPGLPNLKQHFVKQHKRPPKFKCQFESCRMAFPTPTNLKNHEMTHVSMMYSCLLCDRHVFNKGAMSDHMYSVHKTIYDVDTNKNFHREIDLTSYVVAGAVGSFCPICKIKYPNNRAMKIHYFKFHDKANYTPASPAANTESVAEEMS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-