Basic Information

Insect: Gonatopus flavifemur
Gene Symbol: -
Assembly: GCA_018340375.1
Location: Contig1:44581556-44592193[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 30 4.6e-06 0.00063 20.4 1.0 1 23 221 243 221 243 0.98

2 30 0.0031 0.43 11.5 2.1 1 23 266 289 266 289 0.96

3 30 9.9e-05 0.014 16.2 0.5 2 23 296 318 295 318 0.96

4 30 0.77 1.1e+02 3.9 0.6 1 23 400 423 400 423 0.90

5 30 8.7e-05 0.012 16.4 0.1 1 23 486 509 486 509 0.96

6 30 0.0087 1.2 10.1 0.6 1 23 515 538 515 538 0.96

7 30 0.088 12 6.9 1.5 1 23 551 573 551 573 0.97

8 30 7.8e-06 0.0011 19.7 0.3 3 23 618 639 617 639 0.97

9 30 1.9 2.6e+02 2.7 0.2 1 23 671 694 671 694 0.89

10 30 0.0073 1 10.3 0.7 2 23 701 724 700 724 0.94

11 30 2.3 3.2e+02 2.4 0.0 2 23 733 755 733 755 0.84

12 30 0.019 2.6 9.0 0.1 2 23 762 784 761 784 0.95

13 30 9.5e-06 0.0013 19.4 1.2 1 23 792 814 792 814 0.98

14 30 0.19 26 5.9 0.7 2 23 851 874 850 874 0.91

15 30 0.00038 0.052 14.4 1.5 1 23 877 900 877 900 0.97

16 30 0.0011 0.16 12.8 1.0 2 23 907 929 906 929 0.96

17 30 0.00029 0.04 14.7 2.9 1 21 956 976 956 977 0.95

18 30 0.002 0.27 12.1 1.8 2 23 991 1012 990 1013 0.93

19 30 0.19 26 5.9 1.3 1 23 1016 1039 1016 1039 0.94

20 30 0.0037 0.52 11.2 1.4 2 23 1046 1069 1045 1069 0.93

21 30 0.95 1.3e+02 3.6 0.2 3 23 1078 1099 1077 1099 0.95

22 30 4.4 6.2e+02 1.5 0.0 2 23 1106 1128 1105 1128 0.87

23 30 0.12 16 6.5 3.1 2 23 1137 1159 1137 1159 0.96

24 30 0.85 1.2e+02 3.8 0.2 2 23 1165 1187 1164 1187 0.95

25 30 0.0079 1.1 10.2 0.0 1 23 1242 1265 1242 1265 0.95

26 30 0.0029 0.4 11.6 1.6 1 22 1296 1317 1296 1317 0.94

27 30 0.36 50 5.0 1.3 2 23 1427 1449 1426 1449 0.94

28 30 2.1 3e+02 2.5 2.6 2 23 1456 1478 1455 1478 0.96

29 30 0.12 17 6.4 1.8 1 23 1489 1511 1489 1511 0.97

30 30 0.015 2.1 9.3 1.3 1 21 1518 1538 1518 1539 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	30	4.6e-06	0.00063	20.4	1.0	1	23	221	243	221	243	0.98
2	30	0.0031	0.43	11.5	2.1	1	23	266	289	266	289	0.96
3	30	9.9e-05	0.014	16.2	0.5	2	23	296	318	295	318	0.96
4	30	0.77	1.1e+02	3.9	0.6	1	23	400	423	400	423	0.90
5	30	8.7e-05	0.012	16.4	0.1	1	23	486	509	486	509	0.96
6	30	0.0087	1.2	10.1	0.6	1	23	515	538	515	538	0.96
7	30	0.088	12	6.9	1.5	1	23	551	573	551	573	0.97
8	30	7.8e-06	0.0011	19.7	0.3	3	23	618	639	617	639	0.97
9	30	1.9	2.6e+02	2.7	0.2	1	23	671	694	671	694	0.89
10	30	0.0073	1	10.3	0.7	2	23	701	724	700	724	0.94
11	30	2.3	3.2e+02	2.4	0.0	2	23	733	755	733	755	0.84
12	30	0.019	2.6	9.0	0.1	2	23	762	784	761	784	0.95
13	30	9.5e-06	0.0013	19.4	1.2	1	23	792	814	792	814	0.98
14	30	0.19	26	5.9	0.7	2	23	851	874	850	874	0.91
15	30	0.00038	0.052	14.4	1.5	1	23	877	900	877	900	0.97
16	30	0.0011	0.16	12.8	1.0	2	23	907	929	906	929	0.96
17	30	0.00029	0.04	14.7	2.9	1	21	956	976	956	977	0.95
18	30	0.002	0.27	12.1	1.8	2	23	991	1012	990	1013	0.93
19	30	0.19	26	5.9	1.3	1	23	1016	1039	1016	1039	0.94
20	30	0.0037	0.52	11.2	1.4	2	23	1046	1069	1045	1069	0.93
21	30	0.95	1.3e+02	3.6	0.2	3	23	1078	1099	1077	1099	0.95
22	30	4.4	6.2e+02	1.5	0.0	2	23	1106	1128	1105	1128	0.87
23	30	0.12	16	6.5	3.1	2	23	1137	1159	1137	1159	0.96
24	30	0.85	1.2e+02	3.8	0.2	2	23	1165	1187	1164	1187	0.95
25	30	0.0079	1.1	10.2	0.0	1	23	1242	1265	1242	1265	0.95
26	30	0.0029	0.4	11.6	1.6	1	22	1296	1317	1296	1317	0.94
27	30	0.36	50	5.0	1.3	2	23	1427	1449	1426	1449	0.94
28	30	2.1	3e+02	2.5	2.6	2	23	1456	1478	1455	1478	0.96
29	30	0.12	17	6.4	1.8	1	23	1489	1511	1489	1511	0.97
30	30	0.015	2.1	9.3	1.3	1	21	1518	1538	1518	1539	0.92

Sequence Information

Coding Sequence: ATGGAGTCCAAGAAACGTTACCACGAACTCTGTAGGTTGTGTGCCTCTTATGATGCAGTTATGGTGAATATCTTCAATCAAGAGGGTAAAGATCGACAACTGATTGACAAGATTCAGACTTGTTTACCATTCAAAGTAACAGAAGATGACTGTTTACCTAAGTACCTGTGCTATCGTTGTATGTATAATCTCGAAAATTTTTATGACTTCAGAACGGCATGTGTCAATGCCGTAGTATTATTGGAAAGATGTTTACCTGTTAATAAAGCGGCAGGTGATGACGTTAAAGAAAATTCTGATAATCGTGGATCATCTTATTCAGATATTCTAACTATATCAGAAACCTTACCAATGATCATTCCCGAGGCTCCTATCGTGAATCCTAATGCTGCATTGGGTACCCCGCCAAGATTGAATTTTGAAGAAGAGGAAGAAGAAGAAATCGAGCAAGGAAAAGATGATCATGACAGTCGACGGGTATTTGAAAAAAATAAATTTGAAGAAGATGATCAAGAGGATCAAAAATCTGAAGAATATGAGATGGATATGGAAACAAATCCTAGTGATTTTCTAGAAATGACATCAATAGTGACGGATGATAATGATGGAAGTGTTCAACAATCTCAACCCCCTCATCGTATATCGGAACAACACGAAGTTTACGTCTGCTCGCTTTGCAATAAAGCATTTAGTTCCAAGGGTCATTTATCTCTTCACGCTAGAATTCATGTAGGTGCAGGAGACGTCATTGGTGAAAAAGTCATCACCGATGATCATACCTCTTACAAGAGACCTTACCGTTGTGACCTTTGTAATAAATCTTATTCAACCGCCAAACATCGATGGGGTCACGTATCTACGACCCATAGGGGTCATCCAGCGGTAACGTGCGGGTATTGTTCCAGAATATATTCAACCCGTACAAACCTCGAAGAGCATATAAAATCACGACACGCGGGATTACCTTTACAAATGGAAAGACTAGTATCTTCGTTTGCATCAGAAAAACCACATCAATATTTGAACGAAGAACACAAAGATTCTCAAACTATGGAAGCAAGTAGTTTACAATTACCGAATACCGTAAGTAATAATTTAACGTGGGACTTTGCGAATGATTTGAGACCAGAATGCAAAGACGAACAAATCGCGAGAAAAGGAAACCACGAAGATTCAAACAATAGCGATAATAAATCATTTACTTGCATACTATGTAAACAAGATTTTCTTCTAAAATCCTCGTTAACCCAACATATCTTGACTGTGCATGGAATTTCGCCATACAACATGACGGAGAAGCAAGGATGGTCTAAACAAATTAAAGAAGCTTGGGATCATCAAACTTCTTCTACCATATCTAACGATCTTAAACTATCTTCTAAGAAAAATTTGGAGAATGGAGGGGAAAGAAGTGGAGAGATATCTCGTGAAAACTTGGTAGAAATGGAAACAGTTTTTGTCTGTGAAATTTGTACAAGGGACTTCAACGATAGAGCTTCATTGTGGTTGCACATTCGTGCTACTCACAAAGAATTTGCCGCTTTCGCGTGTGGCGTGTGTTTGAAAATATGTTCCGACAACAATCAACTGTTGAATCATGTTAACATGTACCATGGAGGGTCTAAACTTTCCCTCTCTGAACAAAGAAGGTACAGTTGTACGATATGTGGAAGACAACACGATTCACGCAAGAAATTAATTACCCACGTATCAATTCACAATGTTGATCCTTCGTACGATCCTGCTACTTTTGTGCAGTTGAATTCTAATTATTATAATGACACTGTGAACAGCACTGATGGGAATGAACGTCTGTTTGATTTTGATGCAGAAGATGCAGAAAAAGTCGATTGTAATATTTGTTATAAATCATTCCCCAACGAAGATCAGCTCATAAGACATCAAAGAAATGCTCATAAGGTTGAGCAGATGGTCACTCAAGTTGAAGATCTTCACAATCCAAATCCAAGCATCAATGGTACCAACAATAAATCGCAGTATCATTTGTTTTTCGTTTGTGAACTTTGCGGGATTTCTCATTCTAGTAAATGGGAAAGATGGCTGCATGTCAACAATGCACATAGCACCGAACCAACCATCAAATGTGAAAGGCTGGATTGCGGTAAAATTTTTGCGACGAGTTCATTGCGCAACGAGCACGCTCAACACCACGTCATTCAAGGTTCTTCTCCGAATACTTGTGAAATTTGTGGTAAATTGTGGGGTAGTCGAGTAGATTATTGGAAACACGTGATGGGCGTGCACGCGGATACCGTACCATTGATTTGTGGGGTTTGTCTCAAAGTTTTTCCGGAAGTCTCGAAATTGAGTGCTCACGTTAAAACGAAGCACTGGCCATTAAAGAATGGGGATTTCAGTTGTGATATATGCGGTAGGCCTTACTCTAATAAATCAAAAATGTCTAGACACAGGAAGATTCATGGACTGAACAACGAAGATGCATTGAGTAAGATGATCAGTATTAAAAATCCTGTTAATGACGAATCAACGGGAGTTACTAGTCTCGATTACTTCAGCAATATCAATTTGAGTTGTGAATTATGCACCAATACAAAATTCTCCACTTTAGAGGATTTATCGAAGCATAGAAAATGGATCCACGGACTCTTCCCTTGTGACCTTTGTAATAAATATTATGGAAGGACTTCACATTTATGGAAACACGTTAATCGAGTTCACAAAGGTCACGAAGACGTAACGTGTCGCTATTGTTTCAAAACTAGCGCTTCCAAAGATCATTTAGCAGCACATATTTCAAAAATTCATAAATATGAACCTGACATCATGGAAGAATCGAGAAACAAAGATCACGGAAAGTCTGTAAACGTGGACGAGGGTATTCTACACGTTTGTGAGAAATGTAATAAAGGATTTCACAAAAGGTATTTGTTGCGGCGTCACATGAAAGGTTGTCAGAATTATCGAAAAGACGCTGGAGCTCTGTTGACTCGTTGCCGCGCTTGCGAAAGGATTTTCAAAGACCGCGCGAGTCTGCAGAAACACATTGAAAATCATCACAGTACGTATTCGTGTCATCTGTGCAACGAAACGGTCACGTCAAAATTAGGCATAATGACTCACAATCGTATAAAACATATGAATCATCCAGATTTGACCTGCGAGTACAGTAATTGTAAAAAACTCTTTCGTACTAAAGAAGATTTGGAATCTCACAGAAAGGATCATAAATATCACAATCCTACCAATATTTGCGATTTTTGTGGGGATACGGTGGAAAACAAACTCAAACTTAAAATGCATATACTTTCTCTGCACAGAAATGAAATTGGAGTATCTTGCGGAGTGTGTTTAATTCCAATGAAAGATCCGCAAGATTTGAAAAAACATGTCGAGGATGCGCATTTGTCCATACTTTCCAAGCCCAACACTTGTAAAGTTTGTGGCAAACAATATGCTTCAAAATGGAAAGCCTTCGATCACACGAAAAAATGTCACGGTAAAGTATTCAAAACTTGTAAGCAGTGTTTGGCGGTTTTCATCAGCGATTCTGAAATTCAAGATCATTACGAAAAAATCCACAATGTGTCGAAACATCAATTAACCGCTTATGAATATTTGGTATCCAAGACTGAAGGTTACGATAGCCAAAGAATGAATAAAGTGATCAAAGAGGAACCATCTGACAATGAAAATCAATTCTTATCGGACAAATTTAAACGAAAAAGATTATCTACCGATACTTACGATTGTGGTATTTGTCCTGAGATTTTTATCAGTTACATCGCTCTCCAAGAACATTATCAAAATGTGCATAATACCGATCTTGATAGCCGCGCACCGTACAAGAAAATGAAATTCAATTCGGCCGGCAGTGTCAAGCGTAAAACAAAGAAGAGAAAAGAATTCGAATGTAAAAACTGTAAAAAACAATTTAGTACTAAATCTATTTTCTGGAATCACCTAAATACCTGCAGAAAATATAACGTTGATAGCGGTAGTTTAATCAGACAAAGTAACAATCCTCTAACGTCGTCGCCGAATTTAGAGACTTTCTCTAAAAGTACTAATAAAAGTAATAACAAGAAAACAAACGCCGAAGCTCTTGTTAATATTTCAAATATAAACATTCCAGATTTTAATCTATTCGAGGATATAAATATGCAATTGTCATCCGTGGACTCGAGACCCACGACGACATTTTCATCGCGTACGATCAAGACCACCACCTCCGGTGGCAATAAATGTTCGAGAAAAGATTCCCGCAAGGTATACGATGAATCAACGAACACAGTTTGCGCTTGTGAAGTTTGCGGTAAACAATGGCCAGCGAAGAAACATCTCTGGCAACACCTTATCCGTTTCCATCGCAAAGAAGCAGCGGTGACTTGTGGAGTCTGTTTGAAACTTTGTCAAAATTATCACGATCTGAGCGATCATTTGCAAACCACGCATGCCGCTATTCTATCGTGCGATGGGAACAATTTTACATGTAAAATATGCGGTAGATATCACAACGCTCGAAGTAAACTCTTACTGCATATGAGTATTCACATCAATTACGAAGGGAATTTCCTTTGCGAGCATTGTCAACGAAACTTCGACAGCGAAAAAACTCTCGAAGAGCATAGAAAGAATTGTATACCCAGTAATACTGTCAAAAACGAAAACAACGAGGAGAATAGTTTAATAGAGATGGTAGAATCTGAATCGGAAATCGAAGGTGAAACTCGTAGTAGCGGAAAAAGTGAACATTCTGATATCGTCAGTTCTGATAGCGAAGAAGAGGCAAATGATAGCGATGGAGAGTCCAGTTCGAATAGCAGAGTAACTGGCCAAGCGACGGCAGAGGATTCGGATTTGGATAACTCTGAGGCCGAAAATGGTACCGATTGTTTCCGAATTAGTAATAACGAAAACGAAATGACCGCGAGGGTACAGGAATCGGGTGAAGACGATGTCAAGAGAAATCCTCCAGAAGAATCTTCTTCCAATCCCATGTTTGCCACGCTTGATTCTCGAGAGTCACATGACTTTCCTACAAAAAAGTCTGTCGACTTGGAAAGTAATTTTGTCAACAGCGACGCCAAAGATGAAAACGATGATGAAGATGAAGATGAGGATGAAGACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAAGAAGACGAAGACCAAGACCAAGATGGCGACGGTGGCGATGACGAGGAAGATGAAAATGGAGAAGAGGAAGACGACGAAGAAGAGGAGGACGACGATGGTCCTCCGGTTCTAAGTCCTATAATGCCTTTGGTAACCAGAGATGATACAGATGATTGTAATTCTCTAATTATGTTACGTGATTCTGGAGAAGGAGAGAGCAAGTCTTCCGTGAAATGTTACGAAGACGAAGTTGTACAAAATTCAAATTACGAATCTGACGATAGCAGCGAAGACAGTAAAGACGAACAAAATGAACAAATACCGCAAGATGAGGATTTCCGTTCGTATCATGGCCGTTTGCGTAGTAGATCGAGGGAAAGTATCGACGATTGCGAGGAAGAAATTTGTAGCGAGTATTTCGATGAAAGAATGGAAGAAGAAGGTAGCAGAGAGAACGTTCAAAATGACGACGATGTACGATTACGTAATTTAGGAACTGTTCTAATGGTATCCTCGTCAAATGATTTCGAAGATAATCAGACTTTGATGCGGCAAAATCTTCTTTCGGTTGACAACGAAGATTCCAGCGCCGAAGCCATGGAATACGACTATCGAGAAAACACCGAGTACGATGATAAATACTCTACGGGTTCCATTTTAGATTCTAATGAATTCCAAGATGTTTCTTATATCCAAGACGCTTCTGAAGAAGATTTGATAAGAAAAGTGATATAA
Protein Sequence: MESKKRYHELCRLCASYDAVMVNIFNQEGKDRQLIDKIQTCLPFKVTEDDCLPKYLCYRCMYNLENFYDFRTACVNAVVLLERCLPVNKAAGDDVKENSDNRGSSYSDILTISETLPMIIPEAPIVNPNAALGTPPRLNFEEEEEEEIEQGKDDHDSRRVFEKNKFEEDDQEDQKSEEYEMDMETNPSDFLEMTSIVTDDNDGSVQQSQPPHRISEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVITDDHTSYKRPYRCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCGYCSRIYSTRTNLEEHIKSRHAGLPLQMERLVSSFASEKPHQYLNEEHKDSQTMEASSLQLPNTVSNNLTWDFANDLRPECKDEQIARKGNHEDSNNSDNKSFTCILCKQDFLLKSSLTQHILTVHGISPYNMTEKQGWSKQIKEAWDHQTSSTISNDLKLSSKKNLENGGERSGEISRENLVEMETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICSDNNQLLNHVNMYHGGSKLSLSEQRRYSCTICGRQHDSRKKLITHVSIHNVDPSYDPATFVQLNSNYYNDTVNSTDGNERLFDFDAEDAEKVDCNICYKSFPNEDQLIRHQRNAHKVEQMVTQVEDLHNPNPSINGTNNKSQYHLFFVCELCGISHSSKWERWLHVNNAHSTEPTIKCERLDCGKIFATSSLRNEHAQHHVIQGSSPNTCEICGKLWGSRVDYWKHVMGVHADTVPLICGVCLKVFPEVSKLSAHVKTKHWPLKNGDFSCDICGRPYSNKSKMSRHRKIHGLNNEDALSKMISIKNPVNDESTGVTSLDYFSNINLSCELCTNTKFSTLEDLSKHRKWIHGLFPCDLCNKYYGRTSHLWKHVNRVHKGHEDVTCRYCFKTSASKDHLAAHISKIHKYEPDIMEESRNKDHGKSVNVDEGILHVCEKCNKGFHKRYLLRRHMKGCQNYRKDAGALLTRCRACERIFKDRASLQKHIENHHSTYSCHLCNETVTSKLGIMTHNRIKHMNHPDLTCEYSNCKKLFRTKEDLESHRKDHKYHNPTNICDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPQDLKKHVEDAHLSILSKPNTCKVCGKQYASKWKAFDHTKKCHGKVFKTCKQCLAVFISDSEIQDHYEKIHNVSKHQLTAYEYLVSKTEGYDSQRMNKVIKEEPSDNENQFLSDKFKRKRLSTDTYDCGICPEIFISYIALQEHYQNVHNTDLDSRAPYKKMKFNSAGSVKRKTKKRKEFECKNCKKQFSTKSIFWNHLNTCRKYNVDSGSLIRQSNNPLTSSPNLETFSKSTNKSNNKKTNAEALVNISNINIPDFNLFEDINMQLSSVDSRPTTTFSSRTIKTTTSGGNKCSRKDSRKVYDESTNTVCACEVCGKQWPAKKHLWQHLIRFHRKEAAVTCGVCLKLCQNYHDLSDHLQTTHAAILSCDGNNFTCKICGRYHNARSKLLLHMSIHINYEGNFLCEHCQRNFDSEKTLEEHRKNCIPSNTVKNENNEENSLIEMVESESEIEGETRSSGKSEHSDIVSSDSEEEANDSDGESSSNSRVTGQATAEDSDLDNSEAENGTDCFRISNNENEMTARVQESGEDDVKRNPPEESSSNPMFATLDSRESHDFPTKKSVDLESNFVNSDAKDENDDEDEDEDEDEEEEEEEEEEEEEEEEEEEEEGEEEEEEEDEDQDQDGDGGDDEEDENGEEEDDEEEEDDDGPPVLSPIMPLVTRDDTDDCNSLIMLRDSGEGESKSSVKCYEDEVVQNSNYESDDSSEDSKDEQNEQIPQDEDFRSYHGRLRSRSRESIDDCEEEICSEYFDERMEEEGSRENVQNDDDVRLRNLGTVLMVSSSNDFEDNQTLMRQNLLSVDNEDSSAEAMEYDYRENTEYDDKYSTGSILDSNEFQDVSYIQDASEEDLIRKVI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -