Gfla002776.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Gonatopus flavifemur
Gene Symbol
ZNF236
Assembly
GCA_018340375.1
Location
Contig12:7515859-7554686[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 0.00018 0.025 15.4 2.7 2 23 147 168 146 168 0.96
2 26 6.2e-05 0.0086 16.8 1.0 1 23 174 196 174 196 0.98
3 26 1e-06 0.00014 22.4 0.4 2 23 202 223 202 223 0.98
4 26 0.0017 0.24 12.3 0.1 3 23 231 251 229 251 0.96
5 26 0.00011 0.015 16.0 0.6 2 23 262 283 262 283 0.98
6 26 1.3e-07 1.8e-05 25.2 0.6 1 23 304 326 304 326 0.99
7 26 1.8e-06 0.00024 21.7 0.4 1 23 332 354 332 354 0.96
8 26 0.00033 0.046 14.5 3.3 1 23 360 383 360 383 0.97
9 26 0.00068 0.094 13.5 2.8 1 23 392 415 392 415 0.98
10 26 1.3e-06 0.00017 22.1 2.8 1 23 531 553 531 553 0.98
11 26 0.00027 0.037 14.8 3.3 1 23 559 581 559 581 0.99
12 26 0.0023 0.31 11.9 3.3 1 23 587 609 587 609 0.98
13 26 6.7e-07 9.3e-05 23.0 2.4 1 23 613 635 613 635 0.98
14 26 0.0018 0.25 12.2 7.0 1 23 690 712 690 712 0.98
15 26 2.4e-05 0.0033 18.1 5.1 1 23 718 740 718 740 0.99
16 26 5.2e-06 0.00072 20.2 1.7 1 23 746 768 746 768 0.98
17 26 7.4e-05 0.01 16.6 7.2 1 23 774 796 774 796 0.98
18 26 0.21 30 5.7 1.5 2 23 1130 1151 1129 1151 0.94
19 26 0.0092 1.3 10.0 6.4 1 23 1157 1179 1157 1179 0.99
20 26 2.2e-08 3.1e-06 27.7 1.4 2 23 1267 1288 1266 1288 0.98
21 26 0.025 3.4 8.6 5.5 1 23 1294 1316 1294 1316 0.98
22 26 9.6e-05 0.013 16.2 1.6 1 23 1322 1344 1322 1344 0.98
23 26 0.00062 0.086 13.7 3.8 1 23 1350 1372 1350 1372 0.98
24 26 3.5e-05 0.0049 17.6 0.3 2 23 1569 1590 1568 1590 0.97
25 26 5.3e-06 0.00073 20.2 3.7 1 23 1596 1618 1596 1618 0.98
26 26 1.4e-06 0.0002 22.0 3.0 1 23 1624 1647 1624 1647 0.97

Sequence Information

Coding Sequence
ATGTTAACCGAGTCGACCATCACGGATTCTTCCGACAATCAAATGCCAATAGGTTTCATTACAATGGACGATGGTCGAACCCTACTCGCGGTTGCAGAACAAGAGGATGGAACCTTGGAAATCGTGGCAACACCTATATCTTTCATGCAGCAAAGTAGTTTGATTTCCCAACCATTGGTGAAGACCATCGATGGAGATATGATCCTACAACCTGTATTTCAGATTAGTTTAGAAAATATTAGCAATGAAACTCGCTTGTCAACATTAGATATACCGTCCAGCCCTGTTTCAGCTGAAACAAGACCAGAAAAAGAAGGAACAATCACAAAGATTGTAAAACCAAATTTATCTTCAGTGGATGACAGAGGGCAGCAAACGAATGTTAATCAAGTACGGAGGAGAAATCTTGGCCGACCAAAAAAAAATGAGGGTTTAATTAAATGCGATATATGTGGTCAATGTTTTGACAAGCAGTTCTTATATCGTAAGCATATGGACTATCATGCCAAGGAGAAACCGCATCGTTGTCCAAAATGCTCAGCTTCCTTCAATATTCCGTCGAATTTCACATTGCATATGGCAACTCATAATACAGGGGAACCAAAATGTCCTGAATGTGGTAGAAGATTTGCTAGAATGGCTAGCTTGAAATCTCACATGTTGACACATGAAAAAGAAGAAAATCTCTTCTGCAGTGAATGTGAAGATTCATTTCCTACCAGAGTTCAATTGGAAGCCCACTTGAGACTTCATGGTGAAAAATGGGCTACCGAAGACGTCAGAAAGTGCAAACTCTGCAACAAACAATTTGTTCAACCTGCTCTCTACCGACTCCACATACGAGAACATTACAAACAACAAAACAAAGTAGCCAAACAAACGAAAAGAGGAACGAAGCATAAAACAATGTACAAATGCACCATTTGTTTAAAATCTTTTCCAAAACCGAGTCAATTGATGCGACACATCAGAGTCCATACAGGAGAGAAACCATTCAAGTGCAATATCTGTAATCGAGCATTCACACAAAAAGGATCTCTACAAATTCATATAGGACAACATAAAGGAATCCGCCCTCATACGTGTCATTTCTGCAATGCCAAGTTTGGTCAAAAAGGTAACTTGAATTCTCATATTCTTCGAGTTCACAACGCTACACACGGACAGCCAATGTACGAATGCACATATTGTTCTTGCATATTCAAAAAACTTGGAAGTTTGAACGGTCACATGAAAAGAATGCATTTAAATCCAGTGCACACGGCAGAGCCTCCGCAAGATGATAACAACGCGGAAACTGACATACAAACCACGGTAGATAGCGTTTTATCGCAACTTGCATCTTTGAAATCCAGCATTGCTCCATTGGATTCTTCAACTAATTCCGAGTCGAATAAAAATGATATTCTACAGCAAGCGCTCAAAAATAGTGGTTTGTCTAGTAGAAACAAGACCACGGTCAGTCAAACCGACGAATCAAAGAAATCCGAAGCCCATACCACATTCGTAACCTTGTTGGACAGAGGAGTGGACGGTTCCATCAAGAAATACTTGACGATAAAACAACGTTGTATCGGTAATGTTAGATGGTACTCGTGTTCATTTTGCCATAAAGAATTCAAAAAACCGTCGGATTTGATACGGCATCTACGAGTTCACACGCAAGAAAAACCTTTCAAGTGCTCGCATTGTTTTCGATCTTTCGCTTTGAAGTCAACGATGATAGCACACGAACGAACCCATACAGATGTTAAAAAATACTCGTGTGGCTCCTGTGATAAGACTTTCGCATGCCATAGCAGTCTCATGGCGCATATCAAATCGCACATGCAGTCTCATAAATGCGAGGTCTGTGACAAAAATTTCAGTTCTCAGGCTCTTTTAAAAAGTCATATGAAAAGTCATACGAAAGCAAATGCCAAAATCTCACCGGAAGCAGAAGGTTTGGTATCGCAAATTGTGCTTCAAGAACCATTGATAATCAGTGATGCGGGAAACAAAATAAGTGTAGCTCAGGTGCAATCAAAACAGCAACAAGCTCTTGGAAATACCGAAGTCGCCAGGCCGCACAAATGTTGGGTTTGCCATGCAGCGTTCAGAAAAATAAGTCACTTGAAACAACATTATAGAAGACATACGGGAGAACGTCCCTACAAATGTACCAAATGCGACAGGAGATTCACGTCGAACAGTGTCCTCAAATCCCACTTACATACTCATGATGATTTGAGACCGTATAGCTGTTCAATTTGCAATACAAATTTTTCTACTCAAAGTAGCATGAAGCGACATTTAGTCACGCATAGTAACAAAAGACCATTCATGTGTCCGTATTGTCACAAGACTTTTAAAACTTCGGTCAATTGCCGAAAACATATGAAAATACATAAAAATGAATTAGCGCAAAGGCAATTGGAGGAACAAAAAAAACAAGAATCTGATATGAATAAACAAATTGTTGATGAAAAAGTAGAAACCACTGCCACAATTTCCGAAGATTTTGGTGTTCAATTTCAATCCCAAATAACCTCTGATTTCACTCAAGCCTTTTCAGAACAATTTGTAAACATTATCGATAAAAAAGAGAAATCATTTTTATCCAGTAATTCACTCAAGCCTTCCATAGATGAGAATATGATTGATACGAGAACATCGAATTCTATTTCATCGCAAACTCTTCATGCCGACGAGACCGGGACCATAACCTTGCAAAATTATTCGGGCGATCAGAGCCTTACACCTGAAAATATACGAGAAATAGAAGAAACTTTGAATCAACAATTATTTAACATTGGGGTGAATATCGACTTGAGTAATTCCGTCTCGAAGCATGAACAGAATAACAATTGTAAAATTGGCACAAACCAACAGCCTGTTTTGAGTATCATTTATGAAAACACTAAAAACATTGAAACGTCTGGTAACGAGATGTTTGCCTCGCAGTTTGAATCCTTCGACATGAGTCAAATTACGTTGCAGCCGGATACCGAGATGGATATGGGAATAAGTTCTGCAAACTCTACCAGTATGGCAAGTATTTTACCAAGATCGGCTCAAGAGGAACAACAGTTGGTTTCGGCGAAGGACACTTCTAGCGACATTCCAATAAGCGATGTACAGCAAACGTATTCGAAAGTCACGCGGGAACCGTACACGGTAACAGACTCAGATGTCACGTTGAACGCCAAAGAACTACAAAAACAAACCATAATGAGTTCTTCATCTCTCAATGCTAAAGACAATTCAACTTTAGGAAGTGGTTTATGCGGAGAAAATTTTTTGGACACTGAACAGTTGACAGTACACAAAAAATCATACGATAAAAGTGTCATTAGCGAATTGAATAATGGTCATGAGAATTCTTTGAATCAGTGCAATTCGCTATTACAGTGCCATATTTGCAGTAAACAAAATTTCACGATATCAGGTTTGAAGGAACATTTGAAAATCCACCGAGGGACCAAAGAATATCAGTGTCCAGAATGTTGTGCACGATTTTGTACGAATAGTGGACTCAGCAGGCATTTACATACTCACATGAGCAAAAGATCTCAGTCGACCGACCATGATAAATCGCATGATGAGAATTGGTCTCTCACCCTAGTACAATCGGAAGCATCTAAAATGAGCTTGATATCTAAAATGAATTTGTCTACGATATCGCAGTCGGATATGGAAACTGAATTGGAATCATCCGTATCTGAAAAAGTTTTATTAGCAACGGTCGCTGAAAAGAACATAGTAGAAGGAAAAGAGAAGCAAAAAGAAGAGGAAAAAGAAAAGAAGACATATGCGAATAAATGTAAATACTGTCCAAAAACCTTTCGTAAACCCAGCGATTTGATAAGGCATATTCGAACGCATACGGGAGAAAGGCCATTCAAATGTGATTGTTGCAATAAAAGTTTTGCAGTTAAATGTACTTTGGATTCACATATGAAAGTACATACAGGCAAGAAGACATTTTCTTGTCACGTTTGCAACAGTCTTTTTGCGACAAAAGGGAGTTTGAAAGTTCATATGCGTTTACATACAGGTTCGAAACCGTTCCGTTGTACGATATGCGATTTGAGATTTCGAACTTCGGGACATCGCAAAGTTCACACATTGAAACATATGAGAGAATTTAAAGGACTTTCAAGAAGAAAGTCAAGGCACACGAAGATAGCTGCGGTAGCTGAAGCCGCTGCTGATTTAGAAAAGACTTTGAAGAATGATATAGCACAGTCAGAGGTTGCAAAACAGCATCAATCTGATCCTGAATATTCAACTTTAGACACCATAACCATTGATACGAACGATCTGAATAATCAAATAACATTTAACGCCGACGAAACTGCAATCAACAATAATTCTGTGCTGAGCACAAACGACAGTAATCAACTTGTGACTAATTTTCTCTTTTCTCTCGCGAATGGCCTAGTCACGATACAAACGAATAATTCTTCTACTGTGTTACCTGAAAGTACTTCGGAGGTGAACATGTCTCAAGAGACCGAGAGCAACGATTTGGTCTTATCCGAGGCGTTCCAAGTTGACAATGCTAATACCAATCACATCGTGATCACCCAGGTACCATTGCACACCCTTACGACTTCTACCGATCAAAACCAAGTGGATAATTGTCCGAGTATGCCGCACATGGGACAATCCATCTGTACTAAACCGGATCAACAACGCATCAAAACGAATCAATCAAAAAAAGTATGCGATATTTGTGGAAAAATGTTTATGAAACCTTATCAAGTGGAAAGACATAAAAGAATACATACAGGGGAAAGGCCTTATAAATGTGAATTGTGCGAAAAATCTTTCGCACAAAAATCGACGCTTCAAATGCATCAGAAACATCATACTGGTGATCGACCGCATCCCTGTCCTTACTGCGAGCATTCTTTTACGCAAAAGGGAAATCTTCAGATGCATATGAAACGCGTCCATCAACTCGATACAACGGAAAACAAAAAATTCAGGCGAGGACAACAAGTTCTCAAAGCAAAGATCATTCAAGAAAAATTCACTGATTCCAAGATTTTTG
Protein Sequence
MLTESTITDSSDNQMPIGFITMDDGRTLLAVAEQEDGTLEIVATPISFMQQSSLISQPLVKTIDGDMILQPVFQISLENISNETRLSTLDIPSSPVSAETRPEKEGTITKIVKPNLSSVDDRGQQTNVNQVRRRNLGRPKKNEGLIKCDICGQCFDKQFLYRKHMDYHAKEKPHRCPKCSASFNIPSNFTLHMATHNTGEPKCPECGRRFARMASLKSHMLTHEKEENLFCSECEDSFPTRVQLEAHLRLHGEKWATEDVRKCKLCNKQFVQPALYRLHIREHYKQQNKVAKQTKRGTKHKTMYKCTICLKSFPKPSQLMRHIRVHTGEKPFKCNICNRAFTQKGSLQIHIGQHKGIRPHTCHFCNAKFGQKGNLNSHILRVHNATHGQPMYECTYCSCIFKKLGSLNGHMKRMHLNPVHTAEPPQDDNNAETDIQTTVDSVLSQLASLKSSIAPLDSSTNSESNKNDILQQALKNSGLSSRNKTTVSQTDESKKSEAHTTFVTLLDRGVDGSIKKYLTIKQRCIGNVRWYSCSFCHKEFKKPSDLIRHLRVHTQEKPFKCSHCFRSFALKSTMIAHERTHTDVKKYSCGSCDKTFACHSSLMAHIKSHMQSHKCEVCDKNFSSQALLKSHMKSHTKANAKISPEAEGLVSQIVLQEPLIISDAGNKISVAQVQSKQQQALGNTEVARPHKCWVCHAAFRKISHLKQHYRRHTGERPYKCTKCDRRFTSNSVLKSHLHTHDDLRPYSCSICNTNFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTSVNCRKHMKIHKNELAQRQLEEQKKQESDMNKQIVDEKVETTATISEDFGVQFQSQITSDFTQAFSEQFVNIIDKKEKSFLSSNSLKPSIDENMIDTRTSNSISSQTLHADETGTITLQNYSGDQSLTPENIREIEETLNQQLFNIGVNIDLSNSVSKHEQNNNCKIGTNQQPVLSIIYENTKNIETSGNEMFASQFESFDMSQITLQPDTEMDMGISSANSTSMASILPRSAQEEQQLVSAKDTSSDIPISDVQQTYSKVTREPYTVTDSDVTLNAKELQKQTIMSSSSLNAKDNSTLGSGLCGENFLDTEQLTVHKKSYDKSVISELNNGHENSLNQCNSLLQCHICSKQNFTISGLKEHLKIHRGTKEYQCPECCARFCTNSGLSRHLHTHMSKRSQSTDHDKSHDENWSLTLVQSEASKMSLISKMNLSTISQSDMETELESSVSEKVLLATVAEKNIVEGKEKQKEEEKEKKTYANKCKYCPKTFRKPSDLIRHIRTHTGERPFKCDCCNKSFAVKCTLDSHMKVHTGKKTFSCHVCNSLFATKGSLKVHMRLHTGSKPFRCTICDLRFRTSGHRKVHTLKHMREFKGLSRRKSRHTKIAAVAEAAADLEKTLKNDIAQSEVAKQHQSDPEYSTLDTITIDTNDLNNQITFNADETAINNNSVLSTNDSNQLVTNFLFSLANGLVTIQTNNSSTVLPESTSEVNMSQETESNDLVLSEAFQVDNANTNHIVITQVPLHTLTTSTDQNQVDNCPSMPHMGQSICTKPDQQRIKTNQSKKVCDICGKMFMKPYQVERHKRIHTGERPYKCELCEKSFAQKSTLQMHQKHHTGDRPHPCPYCEHSFTQKGNLQMHMKRVHQLDTTENKKFRRGQQVLKAKIIQEKFTDSKIF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-