Basic Information

Gene Symbol
NCOR1
Assembly
GCA_018340375.1
Location
Contig5:7570902-7675110[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.4e-07 0.0013 19.2 0.0 3 43 863 903 862 906 0.95
2 2 1.7e-17 2.6e-14 53.4 0.5 3 46 1328 1371 1326 1371 0.97

Sequence Information

Coding Sequence
ATGGAGACAGTGGGCAAACAAGTCCAGGTAGTGAGTGGACTGGGGGTGGGGGGTCCTGTGGGCCCGGTCGGGGGAGATTTGCATCACCATCATCACCCCCACCCCCACTCGCATCCTCCGCATTCCCACTCTCACCAACATCATCATAGTCATCCCCATGGGACACATAGTCATTCGCTGGTCGGCACGACGATGACCTCCGGAAGGGGTCAGGCCCAACCAGCAACCATGCATAACCAACACTTACCTGCAAGGTCCACCACTACACAGCTGCACAGGCCCACGCAAAGTTACGTCAACATCAAAAGCAGCAGTCCAGTGTCCCCTAGAACGGTTGGAGCCGGAGGAGGTGCTTACGTCCAAGGGGGTGCCGCCGTGGCCTCCGCGGCAGCGATAGCGGGTACGGCTGTCACGGGAACAACGGCGGCAACTGTGGGAAGTGTCAACACAGGAGTGACCCCCACCGTAGTTGGTTGTAGCACCGTTGTTGGTACTGCAACTACTGCCAGCATCGTCACCACTGCCAGTACAGGAGGAGTTATTAGTATTGGAGCCGATATCAATATCGGACCTCCCAATAACGGTGGCAATAATAGTAGCGTTACAATTAATACCGGTGGTAGCGGCAATACCGATAATATTAGTGGGATTGATAATAGCAATCCCGGAGCAGGAGGAGGAGGAGGTAGCACAACGTCTACGGGAAGTACTGCCACGACAACCGTTACCACTACGACGTGTACCGCCACGACCACCACTTGTACTACCACAACCACCACTACTACCACCACCAGCAACAGTCACAATAGTAGTACCAATAGTAGCAACAATAATAATAGTACCGGCGGTAATAGTAGTAATAATAACGTTACCGGTGGTCCCAATCCCGACAACGGTAGCGGTAATAGTAGTGGAAACAATTCCAATCCAGCGGCAAGTAACACAGGGAATTATGTCACTCTACCTGTACCTGGTGGTTTACGATATATTCATCCCTATCCTCCGACTCCAACTTCCGTATCGCCGCAAGTTGTGGCCGCTGTCGTTACATCTGCCGTATCCATTCCTTCGTCCGTACCTGTACCAGCTTCGGCGTCCGCACCTTCACCTCTATCCGCTTCTCTCCCAGTGACCGCGTCCGCCGCATCTGTACCAGTATCTACTATTAACCCCGCTACCACCAGTCAAAATCCATCGCCTTCGGCGTCGGGAACTGTTTACAACGCGAGAGATGTTTATCGCAACACTACTTGTGCCAATGTGAATGAAAGAATCGCCATTAGTATGAGCAGCAGTCCTCTCTCGCAGATTGGGGTTGGAGTTGGAGTAGTGGCTGCTGGAATAACTGCCGAGTATGCGAACAACAACAATACCGTAGGTAGCGGTAGAGGTGATAGACCTAGGATATCTCTTTTACCCTCCGTCTCGGTAGCTTCCTCTGCATCTTCGCCAACGGCTTCGGATTATCATGTGCCGGGTCCGAGGAATCTACGCGTTGGTCTCATACCTCTTCAGTCGGATCAGTATTGCAGTAGAGCGCCTCTCGAGATAACTGGCATGCAAGATGCGCCTCCCTTCAAAAAAATACGTTTAGGCCAAACACAACTTCAAATGCAGCAGTCGCAGTCACGATGTCAGAGTCTGTCTCCGGCTGACGTGTGCGCGAAGCAGGAACCCGCGGTACAATTACATCAACCGCTTAGGATAGACACCAGGCCTACGACAGGGGTATACACGCCGCAAACGGAAGCCATTTCGCCTACGCTTCCAGAGCCGAGTACGCAAGAGGATGCACAATTCAGAAGTAGTAAAGACGATCTTCTGCAACAAATTGCCAAGGTTGATCGGGAAATCGCTAAGAGAGAATCTCAAATTGCTAAACTTAGGAAAAAGTTGAAGGAATTAGAAGAAACGGCCAATAAACCTCTCGAGGCAAGTGGGCTCAAGCGTCAGGTGGAAGAACAGTCGCAGCAACCAAAACATCAATCTCTGGCTCAAAAAATTTATGCTGATAACAGAAGAAAAGCGGAAGAAGCTCATAGACTCTTAGACAGGCTTGGTCCAAAAGTAGAATTACCATTGTACAATCAACCATCGGATACAACGGTTTACCAAGAAAATCGTACGAAACACCAAACGTGTATGAAGGCCAAACTCATAGCAAGATTAAGGAGAGAACATGCCGAAAGAGCGTCTCTTCGTCAACAACAATCTCAAGCGTATACAATTCTTGTCCAGGAATGGCATCGTAAAGTTGACAGGCTTGAAGCGACACAGAAGAAGAAGTCTAAAGAAGCAAAGAATCGAGAATTTTTCGAAAAAGTATTCCCAGAATTACGGAAACAACGAGAAGATAAAGAACGTTTCAACAGAGTTGGAGCTCGGATCAAAAGCGAGGCTGATCTTGAAGAAATCATGGATGGTCTTCAAGAGCAAGAGATGGAGGATAAGAAAATGCGTTCCTATGCTGTCATACCCCCTGTATTAAAGGATATGAAACAAAGGAGAATTGCTTTTCAAAATAAAAATGGCCTCCTGCAACCTGAAGAATTAGAAGCTTTACATAGTGAAAGAAAATTAATAAACGTTTGGAGTTCGATAGAACATGAACTGTTTAAAGAAAAATACCTTCAGCACCCCAAAAATTTCGGAGTGATAGCTCAATCTTTAGAACACAAATCCGTTCCGGACTGCGTGCATCATTACTACCTCACTAAAAAAGCTGAAAATTATAAACAGCTGTTACGAAAGTCACGTTCGCGAACGCGTAGTTCTCGCAATAATCCTAATACTAAGGTAAATAATAGCAATTCTACGATCGGACCTATAGACATTTTAACAACAGGAGTTACGACAAGATTACAACGCGAACAGCAACAAAAGACACATGAAAATCCTCATAGTAGTAGTTCGACGTCAACTACGACGACCACGACGACAACTTCTTCTGTTACAACCTCCAGTACACCACCTACCACGGCCGTTGCCAGTACAGTTTCGTCAGGAACAACTTCCACGAGTTCATCAACCTCTACGACATGTTCAATGACAGATTCGACATCTACGACGATGACGATAGCGTCCTCGGGTACCATCACAACCACATCGAACACCGCATCTACTGTAACAACAGTTTCTAGTGCGGCGGATACGAGAGAATCCAATAAAGAAAATAAAGAAAACAAACCAGATTCGAAAGATGGGTATCATGTCAAAGTGGAAGCGAAAGAAGAATCGCAGTCTAGTTCGGAAACAACGCCTGGAAAGGACACCAAATTAATAACCGACAGTAAGAGTACGTTGTCGTCGTCATCGCCGTCATCTTTGAATGTCAACGCGGCAAACTCTGGTGCAATGCAAACAACGGACATTAAAGATGTAAATAAAAAGAAAATCAGCAACAGGGAAGCGGCCAGTGGCGTCGGTGGAAATTCAGCATCGCCTCTACTGGAAATTGGCAGAATAAAAGACAAAAAGAAAGAAAATCACGCTACACCCATGGAAACCAGTGACGAAGAGGCGCAGTCGCTCGATACCACTGATAACAAGCAAATAGGACCTCACGCGTGTGCCGTGTGTCAAACCGTGGTCGAAGGCAATACGCAAAGTCGAGCGTTACCTAGAAGCCAAGCGTCGCAATATGGTTTACGAGAGGATCAGGTACCTCCTGGGGCACGAGTTTGCAACACGTGCAGATGTAAAGCGGTTAGAGGACGTTACACCGCCTGTCCTTTACCCGGTTGTCCAAATCTCAACAGCGCCGGCTCTTCCAAAGGCAGAGTCAAACGTTTAAGAGCTCTACCGGCCAAGTGGCCGGACTTGCCGCCGGAGATACGGGAATCGATAGCGCGAGAATTTCAAATTCCAAACAGCGCGACCAAATGTTGTTCCGCTTGTTTCAATCGGATATCACGGCGTTTGGCGCCTCACGTCGCCGGCGGAACGGAAGTAACGGAGGACGGAGCCGAATCTTTGGCTCGACAATGGTCGGACGAGGAACTTGAATTGCTTCGTAAGGCCCTTCGAGAGCACGGTACCAATTGGTCGAAGGTTGCGGAACAGATACCGGGGAAAACGAATCATCAATGCAAAAACTATTATTTCACTTATCGGAAAAAACTCAGTTTGGATCAAGTTGTGGCAGAGTACTATCAATCTTTAGGAGAGGAACGAAGGCCCTGCTTGACCGACGAAGAAGAAAGCGGTAGCAGCACGAGCAGTTGCGATGAATTGGCTGTTCACGATTCGAGTGATACAGCGAGCGCTGGAAGTCCGATAAATACCATATCCGGTATAACGCCGGTATCGACGTGTTCCACGACAACCGCTGGCTTATCGATATTCCCCCGATCAACGGGGGAGTCGAAACATAACGAAAAGATATCCGATATAGCGGTGGTATCTCTCGTACCTCCGGGTAGCGTCGGACCGCCTCAGCATCAGTCTTCCACGAGCGGAGTTTTCAGCAGCGGTAACAATGCGGTGACCGGTAACAGAGAGGATTACGACAGTTCTGCCACGACTGCGGATGAAGGTCAGGGTGTTACCGATATGGACAATAGCAGCGTCGTAGTAACTTTGACGAGTTCCGGGGGAAGTTTGAATACTTCGATGCCCCAGCAGCCGCCACAACCGCAGCAACAACAGCCGCAGCCACAGCCACAACAGCAACAACAGCATCCCTCGATACCGGCCGTGGTTCATTCTCCCCCTTCGACGACCAGTAACAATAATCCTTTGACCGTCAAGGATCTCATGTTGGGTGTCATCGAAATGCAGTTGAAACGTAATCCTAACAGTCCAGGTAGCGCGAGTAGAGCTTCGATTCCCGTGAGTTCGGGCACTCCCACTATATCTAGTATATTGAAAACGGATCATCGTAACGATATCACCTTCGTACGGGAATATAAACCATCGTCGAGCGTCACCGGTACTGCCATATCCAATAGGGATTCGAACTTGGCAACTTTGTCGGTCGTATCCGGACCTCATCACGTCCACCGTTCGACCGCTAGTCCTCAACAAATTGGTCAAATGCAGGCCACGATTACTCCCTGTCCCCCAACCGTACCCAATAGTCAAGCGTCTCCGTCGGATATGCTTTCGAAGGAAGGGCTGGTAGTGATGCAAGTACAACAACCTTTACGGGAAACGGAAGGAACTCTTGATCTCAGTATAAAAAAGCCAAGACAGCAAGATTACAATCATTCTTTACAATCTTCGCATAAGCCCCCACCGTCCGTGACCGTTTATCGAACGGATCCTCCGCCGGGAGTTTACCATCACCCCCATGCGGCGCATCCGGAACGAAGTCACGGAGCGAAAAGTCCTCTCGTTTACGCATCTTCGCCGCGACCTCAAGCTCCTCTCACGCCAAAAATCAATAAAACTGGGGTACCGCCTCCCTCGCATCCAAAATTATCGCCCAAATTGAGCGCGATTCAATCGACCAGTCACAAAACTGGATCCATCACCCACGGAACGCCGGTTTCCAACACCCGCTACGAGGGTCTTCTCCGACAAATGACACCCCCGGGTAATCCTACGAACGTTAATACTCCCAACCCGGTGAATCCTGCCGCCATGAACGCTCATGCTCCAACTCAAAAGGAAACTGGCTCCATCACGCAAGGGACACCGGTTCATCCTTTCGCTGTTGACAAACGGGCACAAATGTACGATTATCATCGAACCATCAGACCTTCCCCGGCATCCTCGAATGTTTCGGCCCAGAGCCAAGGTCAAGGTCAAGTGGCTCCGGTTCCACCTCCGCAAGCGTCGCAAGGCGTAGGGGCCACGCATAACAATCAATACAACTCTTATTCCTCCCGACCTCCTCCCAGCTATACCATAGAACAACAGTTGTCCTCCCGGCAAATCATCATGAACGATTACATCACGAGTCAACAGATGCACGCTCGAAGTCGAAGCAACGGAGGCAGCGCCGGGGGCAGCGGAGGTGGGGCTGGCGGAGGAGCTCCACCTGCCGAAGTCGTGGGTAAAAGTGAAAATCCCTCGACGATATATTACACCAGCACTCCACCCCCTCAATCGCATACTCAAGCGCGTCAGGGAGTCATCCAAAGACACAATCCTCAAAAGCAAATCCATTACCCTCCCCCACCGCCGGGATTAGAAGCCTTTTCGAGTTTGGTCGATGTCGCGGTACAGCAACCAAGTTTACCCGTTCCCCATCCGCACACGCATTCTACGTCGAGCAATACGAGTCACGAAGGTCTCGGCAAGGCCATGGCCGACAGACTCCTCGCGGACCGTTACGTCGACAATAACAGGGTGTTCCGAGAACAAGAGATACGCCTGCAGGAACAGCATCGTTTGGCCATACAACAGGCCGAACACAGAATGGCGGTATCTCACCATCAGCGAGAAAGAGAAAGAGAACGGGACCTCGCTCATTTGAGGGAAAAAGAGGAACAGCGTTTACAACGCGAAAAAGAATTTCAACAATTCGAACACCGCATAGCCGTGCAGCAACAACAACAGCAACAACAGCAAGCGCAACATCATTCCCGAGAAAAGGATATGCATCAGCAGGATCACAGATTGGCCCAGCAGAGGGACAAAGATGGTCATCACCTGGAACACCGTCATCAGAAAGAAATCCAACACGTGGATCATCGTTTAACCATTCACCAACAAAGAGAAAAAGATATTCATCAACAGATGGCTGCCGCTGCTGCCGCTCAACGGGAAAAAGAGCATCAGGAACACAGATTGGCCGTGCAACAGAGAGAAAAAGAGATGCAACAGCAGGAACAACGACTAGCGATACAACAGCAAAGAGAGAAAGAAATGCAACAACAGCAACAGCAGCAGGCCGAACATCGTTTGGCCATGCAACAACAGAGAGAAAGAGACTTGGTCCATCTTCAACAACAACAGCAGCAACAACAGCAACAGCAACAGCAGCAGCAGCAGCAACAACACATACAACATCACATCCAACAGCAACACCGTATCGAAGCCGAAAGACGACATATAGCGCAATTATATAGAGATCAACAACAACAGCAACAACAGCAGCAGCAGCAACAGCAACAACAACAACAACAACAGCAACTGGAAAGGGAGACTTCCTCAAGGCTATTGAGTAGCGGATTTTCACAATCTTCTAGACTTCAACAACCCTCCCAGCAGTCATCGATGTCTAGAATGAATCAAAGTGTCGCGAGTCAACAAAACGAAGGTTCATCGACATTAACCGCTGCCAGTTTGATAGATGCCATCATAACACATCAAATTAATCAAAGCGTCGAAAATGTTGGAGGAAGTCAAGGAGCCAACAATCAATCCACCAGACCTGGAGATCGTCTTTTTCAGGGGTTTCAAAGGGACAATCCCACGGAACCGAATGGTATCGCGCATAGTCCTGCTGTTGATAATACGGGAGGAAGTAATACGGCGGGTAACGGAAGCGGTGGTGGAAATGGGAATAAAGCTATCACTCTTGGAGAACACGTTGATCATATTATTACTAAAGATTATGGACCAGCGCATCCTTCTTATAGAACTTATACCGGATATCAAATACCGGAAGATCAGTGGAAGAGAAGGAAAGGAATGGAGCCGGATTCGATGAAACCTGGAGACGAACGGCATATAATTCGTGTAACGCAACCGCAATCGCAACAACCACAACAGCCGCAACAACCGCAATCGTCGCATCATCATCCTCATCACCTTCATTCTCAACAACAACAACAGCAGCTTCATCATCCTCACCACCATCACCCGCATCATCACCATCAACAGCAGCAACAACAGCAGCAGCAACAGCAACAACAGCAGCAGCAACAACAACAACAACAACAAGCAGCTCAGCTATCCAAACAGCAATTTCATTCGGTCGAACCAGTTTCGCCTCCGGATGCTCCAAGCAATCACTACGGAAGACGCTTTTACGAAACGACCACTGCCACGACGACTTCCGGTACTCCAAATAAGCCACACCTTTCGCCTCTTGATTACGTGAAAAATAAAATCGTCGAAGTGATGCGTACGTCGGAGGATGACAAAGCGGGTAACGTGAGCAACGATAGGAACGGAAATAATCCAACGAGCGGAGAGAAGGAAGAAAAGATCGGAGGACCCAACACCGCCGACAGTCCTGCGGGAAACGAATTGGTGGTAGATGAAATATCTAATCAAAGTTCACAACAGCAACAACAACCTCCCCCCGTGCCCGGGCCAAATACAACTTTTTATCCTTTCAATGCGTTGGGAGTTCACACTGGACCGCCCCCGGCGCCTCCTCCTCCCACGTTGGTTTGCGCTTCCACGACTAAATCCGAACAGATGCAGGCGGAACCGGCACCTTTGCTTTCTGCCCAATACGAACCACTCTCAGACGAGGATTGA
Protein Sequence
METVGKQVQVVSGLGVGGPVGPVGGDLHHHHHPHPHSHPPHSHSHQHHHSHPHGTHSHSLVGTTMTSGRGQAQPATMHNQHLPARSTTTQLHRPTQSYVNIKSSSPVSPRTVGAGGGAYVQGGAAVASAAAIAGTAVTGTTAATVGSVNTGVTPTVVGCSTVVGTATTASIVTTASTGGVISIGADINIGPPNNGGNNSSVTINTGGSGNTDNISGIDNSNPGAGGGGGSTTSTGSTATTTVTTTTCTATTTTCTTTTTTTTTTSNSHNSSTNSSNNNNSTGGNSSNNNVTGGPNPDNGSGNSSGNNSNPAASNTGNYVTLPVPGGLRYIHPYPPTPTSVSPQVVAAVVTSAVSIPSSVPVPASASAPSPLSASLPVTASAASVPVSTINPATTSQNPSPSASGTVYNARDVYRNTTCANVNERIAISMSSSPLSQIGVGVGVVAAGITAEYANNNNTVGSGRGDRPRISLLPSVSVASSASSPTASDYHVPGPRNLRVGLIPLQSDQYCSRAPLEITGMQDAPPFKKIRLGQTQLQMQQSQSRCQSLSPADVCAKQEPAVQLHQPLRIDTRPTTGVYTPQTEAISPTLPEPSTQEDAQFRSSKDDLLQQIAKVDREIAKRESQIAKLRKKLKELEETANKPLEASGLKRQVEEQSQQPKHQSLAQKIYADNRRKAEEAHRLLDRLGPKVELPLYNQPSDTTVYQENRTKHQTCMKAKLIARLRREHAERASLRQQQSQAYTILVQEWHRKVDRLEATQKKKSKEAKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEMEDKKMRSYAVIPPVLKDMKQRRIAFQNKNGLLQPEELEALHSERKLINVWSSIEHELFKEKYLQHPKNFGVIAQSLEHKSVPDCVHHYYLTKKAENYKQLLRKSRSRTRSSRNNPNTKVNNSNSTIGPIDILTTGVTTRLQREQQQKTHENPHSSSSTSTTTTTTTTSSVTTSSTPPTTAVASTVSSGTTSTSSSTSTTCSMTDSTSTTMTIASSGTITTTSNTASTVTTVSSAADTRESNKENKENKPDSKDGYHVKVEAKEESQSSSETTPGKDTKLITDSKSTLSSSSPSSLNVNAANSGAMQTTDIKDVNKKKISNREAASGVGGNSASPLLEIGRIKDKKKENHATPMETSDEEAQSLDTTDNKQIGPHACAVCQTVVEGNTQSRALPRSQASQYGLREDQVPPGARVCNTCRCKAVRGRYTACPLPGCPNLNSAGSSKGRVKRLRALPAKWPDLPPEIRESIAREFQIPNSATKCCSACFNRISRRLAPHVAGGTEVTEDGAESLARQWSDEELELLRKALREHGTNWSKVAEQIPGKTNHQCKNYYFTYRKKLSLDQVVAEYYQSLGEERRPCLTDEEESGSSTSSCDELAVHDSSDTASAGSPINTISGITPVSTCSTTTAGLSIFPRSTGESKHNEKISDIAVVSLVPPGSVGPPQHQSSTSGVFSSGNNAVTGNREDYDSSATTADEGQGVTDMDNSSVVVTLTSSGGSLNTSMPQQPPQPQQQQPQPQPQQQQQHPSIPAVVHSPPSTTSNNNPLTVKDLMLGVIEMQLKRNPNSPGSASRASIPVSSGTPTISSILKTDHRNDITFVREYKPSSSVTGTAISNRDSNLATLSVVSGPHHVHRSTASPQQIGQMQATITPCPPTVPNSQASPSDMLSKEGLVVMQVQQPLRETEGTLDLSIKKPRQQDYNHSLQSSHKPPPSVTVYRTDPPPGVYHHPHAAHPERSHGAKSPLVYASSPRPQAPLTPKINKTGVPPPSHPKLSPKLSAIQSTSHKTGSITHGTPVSNTRYEGLLRQMTPPGNPTNVNTPNPVNPAAMNAHAPTQKETGSITQGTPVHPFAVDKRAQMYDYHRTIRPSPASSNVSAQSQGQGQVAPVPPPQASQGVGATHNNQYNSYSSRPPPSYTIEQQLSSRQIIMNDYITSQQMHARSRSNGGSAGGSGGGAGGGAPPAEVVGKSENPSTIYYTSTPPPQSHTQARQGVIQRHNPQKQIHYPPPPPGLEAFSSLVDVAVQQPSLPVPHPHTHSTSSNTSHEGLGKAMADRLLADRYVDNNRVFREQEIRLQEQHRLAIQQAEHRMAVSHHQRERERERDLAHLREKEEQRLQREKEFQQFEHRIAVQQQQQQQQQAQHHSREKDMHQQDHRLAQQRDKDGHHLEHRHQKEIQHVDHRLTIHQQREKDIHQQMAAAAAAQREKEHQEHRLAVQQREKEMQQQEQRLAIQQQREKEMQQQQQQQAEHRLAMQQQRERDLVHLQQQQQQQQQQQQQQQQQQHIQHHIQQQHRIEAERRHIAQLYRDQQQQQQQQQQQQQQQQQQQQLERETSSRLLSSGFSQSSRLQQPSQQSSMSRMNQSVASQQNEGSSTLTAASLIDAIITHQINQSVENVGGSQGANNQSTRPGDRLFQGFQRDNPTEPNGIAHSPAVDNTGGSNTAGNGSGGGNGNKAITLGEHVDHIITKDYGPAHPSYRTYTGYQIPEDQWKRRKGMEPDSMKPGDERHIIRVTQPQSQQPQQPQQPQSSHHHPHHLHSQQQQQQLHHPHHHHPHHHHQQQQQQQQQQQQQQQQQQQQQQAAQLSKQQFHSVEPVSPPDAPSNHYGRRFYETTTATTTSGTPNKPHLSPLDYVKNKIVEVMRTSEDDKAGNVSNDRNGNNPTSGEKEEKIGGPNTADSPAGNELVVDEISNQSSQQQQQPPPVPGPNTTFYPFNALGVHTGPPPAPPPPTLVCASTTKSEQMQAEPAPLLSAQYEPLSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-