Basic Information

Insect: Gonatopus flavifemur
Gene Symbol: T
Assembly: GCA_018340375.1
Location: Contig17:2518552-2524979[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.2e-07 2.5e-05 24.2 0.0 2 31 268 297 267 299 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.2e-07	2.5e-05	24.2	0.0	2	31	268	297	267	299	0.96

Sequence Information

Coding Sequence: ATGTCAACTCTCGAACACTGGCATATAGAGGGTTACTTGATTTTGGTTCCGATCGATGGTGCGGTCGCTGGAAATTTAAACCAAAAAGCAGATCATGGGCTTGTTCTAATGTTCCAATCCTTGGATGACATGCAAGCTGCTCAACCAATCAGTGTATTTGCGTCAAAAAGACCTGTTACAGGAACAGTGTTAGCACAGCTCATTGTTAAAGCAATTATCTTGCTCGAAAACTGTGGTGCACTGATTCATGGAGTTGTCAGTGATGGAGCTGCTCCAAATCGGAAATTTTGGTCAGAAATGGGGATCAATGGGAAGAGAAACGAGCTAAAAAGTTATTTTGAGCATCCAATAGATAATTCAAGAAAAATTTTCGTCTCCTCAGATACCCCACATTTGATTAAAACTATGAGAAATCGTGTATACCAACAGGATTTACAGACAGAAGCAGAAGGACCTTCTATTAGCTGGAAGCATTTTAATACTTCATACGACATTGATCACTCGATGCAGGTTCCTTTATGCCCTAAATTAACCGCCCATCATCTGAATTTGACAAATTGTGCAAAAATGCGAGTTCGTTTGGCTGCACAGATACTGAAGGAATCACTGGAAAAATTACATAAATGGGAAGTACTTGTAGAGCAAAAGCTCATCAGCGAAAAAATGTTTCTCACCAGACAAACTGCAGAAGGGCTAGCTGTCACTTTGAGGTCAATGATAGACATCACTGATTACTTGACAAATAATTTCAAGTTTTCTTGCGTACTGTCTGGGAATATAACACAAGATGCCCTAGAGTCTCAGGACAGAATGAATGAGGCCATACGAAAGGTTACGTCCGGTGAAATGACTCTGCGTCAAGCTGTTGATCCTTATGAAGTCCCTTATACTTATATTAATTATATTGGTATCACGCCAAAAAATGTTCGAAAGTATGCTTTTGATTATGCTGTTCGTCATAATTTGAAACATAACTTCAATTTAGAAACAAAACTGGCTGGTGAGGACTGGTTTCATAGATTTATGCTCCGAAATAAGAATATTTCCATCAGAAAACCAGAAGGTTTATCGAGAGCAAGAATCAATGGCATGCAGGAAGAGAAGGTTGAAGAATTTTACAAAGTGTTAGAGAAAGTTATTGATAACAACAACTTACGAGGTAGGCCAGAATGTATATATAACCAAGACGAAACAGGCTTACCATTGAATAACCGTCCTCCCAACCTTGTTACACAAAAAGGAAATAAGGATGTCGTTAGCATGACTAGCGTTGAACGTGGTGAAAACGTTACAGTTTTAACATGTATGAACGCTGCCGGTCATTTCATACCTCCTTTCGTTCTATTCAAAGGAGTTCACAAAGGAGATGATTTTATGGTAGGTATGCCCTCTGGAACAGATATTTTCATGACAGAAAATGGCCACTTATCCCACACTAACTTGGAAGTTATAGATATCTGCGAAGCTTCCGACATTGGACTTGTGCTCCTTCCACCACACACATTGCATGCTCTGCAACCACTGGATGTCTCTTTTTTCAAACCATTGAAAAGTTATTATCATCAACAAGCAACTTCATGGCAACACAGTAACACAGGATTTGAGAAAACTGGGATATATCCTCTCAATGTTCATACTATTCCACGTCATAAGTTCGTGTCAAGCCTTACATCGAATAACTTTCCACCGGAAAGACCTTCCAGTGATGAAAATCAACCAAATGTTAGTATTGATCTACAACTTTCGACTATTGTTGCCACACTTCCTGCAACAACACATGATGAAAGCAGTGAGAATATGAGGGATATCATACCATCACCTAAGAAACAAACATCTGTGAGCAAGGCTTGA
Protein Sequence: MSTLEHWHIEGYLILVPIDGAVAGNLNQKADHGLVLMFQSLDDMQAAQPISVFASKRPVTGTVLAQLIVKAIILLENCGALIHGVVSDGAAPNRKFWSEMGINGKRNELKSYFEHPIDNSRKIFVSSDTPHLIKTMRNRVYQQDLQTEAEGPSISWKHFNTSYDIDHSMQVPLCPKLTAHHLNLTNCAKMRVRLAAQILKESLEKLHKWEVLVEQKLISEKMFLTRQTAEGLAVTLRSMIDITDYLTNNFKFSCVLSGNITQDALESQDRMNEAIRKVTSGEMTLRQAVDPYEVPYTYINYIGITPKNVRKYAFDYAVRHNLKHNFNLETKLAGEDWFHRFMLRNKNISIRKPEGLSRARINGMQEEKVEEFYKVLEKVIDNNNLRGRPECIYNQDETGLPLNNRPPNLVTQKGNKDVVSMTSVERGENVTVLTCMNAAGHFIPPFVLFKGVHKGDDFMVGMPSGTDIFMTENGHLSHTNLEVIDICEASDIGLVLLPPHTLHALQPLDVSFFKPLKSYYHQQATSWQHSNTGFEKTGIYPLNVHTIPRHKFVSSLTSNNFPPERPSSDENQPNVSIDLQLSTIVATLPATTHDESSENMRDIIPSPKKQTSVSKA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -