Gfla016046.1
Basic Information
- Insect
- Gonatopus flavifemur
- Gene Symbol
- AFG3L2
- Assembly
- GCA_018340375.1
- Location
- Contig4:29679620-29687426[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.3e-06 0.00069 19.6 0.0 2 38 208 244 207 250 0.82 2 4 4.8e-10 9.9e-08 31.9 0.0 5 39 261 294 258 301 0.85 3 4 2.9 6e+02 0.6 0.0 21 34 328 341 314 346 0.80 4 4 3.8e-10 7.9e-08 32.2 0.0 4 39 372 407 357 413 0.93
Sequence Information
- Coding Sequence
- ATGTCTGAAATAGTTAATCAAATTGGCATGAATGATAGCTACTGTTTCAAATGGAATGATTATCAAAATCATATCCCCAATTTAGCTAGTCAACTGTTGGAAGAAGATTCTTTGGTGGACGTTATATTAGTCGCTGATGGAGAACGTATTCACGCACATCGTATTGTATTGTGCTCTTGTAGTACTCTATTCCAAGAAGTTTTGAGTGAGGTAAATGAAGATCGTCCCACTATCATTTTGAGCGATATATCTGCTGAAGATGTAAAGTCAATTATTGAATTCGTATATCATGGGGAAGTACGAATTCCAGTAGAAAATATCAATAGTTTGTTGGATGCCGCACGCTCTTTAAAGATATCTGGTCTCATTGAGATTGAAGGTTTGGAAGAAAGTGATACCGATACTAGAGATGGTCCCTGTCAAGAGGATTCTGGAACAGAATTGAATAATATTGATAGTACTGATTTCATAGAACCTTCAGACGATTTACCCTGTGATAGCAACCAAATTAATTATGAGAATGAAGGAACGTGTGATACAAAGAAAGAAAAAACTCCAGAGATATCTGCTTTGATGAAAAAAAGAAAACGTAGAAGAGATACAATAAAGAGGGATTATAGTGATGATATGTTGGTATCTGCTATCAATGACCTAAGAGCTGGGCAAACATTAATTGAAGCTGCTACAAAGCATAATATCCCACGTTCTACCTTATATATGCGTGCCAAGACATTAGGAATCCATTTAAATGCATCAAGAAACGAATATCCTGCTGAATGTATGAAAGCAGCTATAAATGCTGTTATAGGAGGTTCCAGTTTACAACATGCTTCCGAAATGTACAGTATCCCTAAAACAGTTTTATGGAGAAGAATTCAAAAAGAAGGATATCAAATTTTGAGATCTGAAATGAAAAGATCCTATGGATCGGATAAAAGAGAAGCAGCGGTCAAAGCCTTGGAAAGAGGGGAAAATCTTACTAAAGTTGCTCTTGAATTTAAAATACCAAAAACTACGCTGTTTAGAGATAAGGCAAGACTTGTAGATCAAGGGAAATTACCATTATCATTTTGGAAAAAGCGTAAAACAGAAAATGAAGAATTAAAAAGGTCAAGACTGGAAGAAGCTGTTGCAGCATGTAAAGGAGGAAAAATGTCTCAAGCAGCGGCATCTTTAACGTATCATATTCCAAAAACTACAATATGGAGAAGGCTTCAACAAGATGGGAAAAAATCTAAGCGATCCTCAAATTCGAAAAGAAGATTGATTAATACTGTACAAAATAAAGAAGATAAATCTCAGGATACATCCAATTTAACGTATTGTGAGATTTCATCTGAAATCCCTATAACTTATATAAACGAAAACAGTATACCTGAAGATTCAGTGATAATACTGACAACAGACGACGTGGGTGGACTTAATTTGGAAGATGCAAGACAGATTATTGTAAATTCTGTGAAAGGCAAAGAAACTCCTAAAACTGAGAAACCAACAGACGCAGTTTCCAAGGAAGCAAAAAATGAACCACAGAAAGAAACTGGTAGTAAAGAAGCGCCATCATCCTCATCGTCATCTTCAAGCACTTCTGCAAAAAAATCTGGAAGTACATGGTCTTTCGGTGGCTCCTTCGGGGCCGGTGGTCGTTCCGGTGGATCGAGTAAACCTTTTGAAACTGGAGATAAAGATAAAATGATGTTAACGTTTGGTGTGATCGGAGCAGTAGGAATTTTAGGTTTCCTGCTTTTCTCAGATTTTAGTGTGAAGGAAATCACATGGAGAGAATTTGTGTACAGTTATTTGAATAAAGGAATAGTGGAAAAATTAGAAGTTGTTAATAAAAAATGGGTTCGTGTCCATTTAACGCCTGGAAATTCGGCCGATGGATCAAACGTTTTGTGGTTCAATATTGGGAGCACGGATTCCTTCGAAAGAAATTTAGAAGTAGCACAATTGGAATTAAACATAGAACCACAAAATCATATTCCAGTGATTTACAAAAATGAAATGGAAATGGGAACTTTGATATCGTATTTACCAAATATATTTATGTTACTTGTTGTACTTTATTTAATGCGGCGATCGGCTGAAATGATGGGAGGCAAAGGAGGACGTAAAGGTGGACTTTTCGGTGGAGTAATGGAATCTACAGCAAAATTGATCAATTCGAATGAAATTGGAGTGAGATTCAAAGATGTAGCGGGATGTGAAGAAGCTAAAATTGAAATTATGGAATTTGTAAATTTTCTAAAAAATCCACAACAGTACATAGATCTGGGTGCTAAAATACCTAAAGGAGCTATGTTAACAGGTCCACCTGGTACTGGTAAAACGTTACTAGCCAAGGCTACTGCAGGCGAGGCAAACGTTCCTTTCATCACTGTATCTGGATCAGAATTTTTAGAAATGTTTGTGGGAGTTGGTCCATCTAGAGTACGCGATATGTTTGCAATGGCTCGTAAACACGCTCCATGTATATTATTTATCGACGAGATAGATGCGGTTGGAAGAAAAAGAGGAGGTCGTAATTTTGGTGGTCATTCTGAACAAGAAAATACTCTCAACCAACTGTTGGTTGAAATGGACGGTTTCAATACAACCACAAATGTAGTTGTACTAGCAGCCACCAACAGAGTGGATATTTTGGATAAAGCTCTTTTGCGTCCTGGCAGATTTGACAGGCAAATATTTGTACCTGCTCCAGACATCAAAGGACGTGCTTCTATCTTCAAAGTGCATTTAGGTCCTTTAAAAACGAATTTAGATAAAGTTCAGTTAGCTCGAAAAATGGCATCCTTGACTCCAGGATTCACAGGTGCGGATATCGCGAATGTTTGTAACGAAGCAGCATTAATCGCAGCAAGAGATATGCTCGACAACATTCAATTGAAACATTTTGAACAAGCTATAGAGAGGGTAGTTGCTGGTATGGAGAAAAAAACAAACGTATTACAACCTGAAGAAAAGAGAACTGTCGCGTATCATGAAGCTGGTCATGCGATCGCGGGTTGGTTTTTACAACACGCAGATCCTCTTTTGAAAGTATCTATTATTCCTCGTGGTAAAGGTTTAGGATATGCCCAATATTTACCCCGTGAACAGTATTTATATACGAAAGAACAATTATTTGATAGAATGTGTATGACGCTTGGAGGAAGAGTTTCGGAAGAAATATTCTTCGGTCGAATTACAACGGGAGCTCAAGATGATTTAAAAAAGATTACGCAAAGCGCGTATGCTCAAGTTGTACATTACGGTATGAACGAAAAAGTTGGCAATGTTAGTTTCGATATGCCCCAGCCAGGCGACATGGTTATGGATAAACCATATTCAGAGCACACAGCACAACTCATTGATAAAGAAGTCCAAGATTTAATTAAGTCGGCACACAAGAGAACTCTTGCCTTACTCACGCAACATAAAGAAGATGTCCGAAAAGTAGCAGAACGTCTTTTGAAGCAAGAAATTTTAAGTAGAGATGATATGATAGAGTTGTTAGGACCCAGGCCTTTCCCAGAAAAATCAACGTATGAAGAATTTGTCGAAGGTACAGGATCGATAGAGGAAGATACTAGTTTACCAGAAGGTTTGAAGGGGTGGAATGAATCGAAACAACCTTCTGATACCGACGGTAAGTCCAAAGAGAAAGAAGTCGCGCCTGAAGGGCAACAACAACCAATCACATCAACCACAACGACATCCAATCCTCCTAACAAAGATCAATCTCAGCACAGAGTATAG
- Protein Sequence
- MSEIVNQIGMNDSYCFKWNDYQNHIPNLASQLLEEDSLVDVILVADGERIHAHRIVLCSCSTLFQEVLSEVNEDRPTIILSDISAEDVKSIIEFVYHGEVRIPVENINSLLDAARSLKISGLIEIEGLEESDTDTRDGPCQEDSGTELNNIDSTDFIEPSDDLPCDSNQINYENEGTCDTKKEKTPEISALMKKRKRRRDTIKRDYSDDMLVSAINDLRAGQTLIEAATKHNIPRSTLYMRAKTLGIHLNASRNEYPAECMKAAINAVIGGSSLQHASEMYSIPKTVLWRRIQKEGYQILRSEMKRSYGSDKREAAVKALERGENLTKVALEFKIPKTTLFRDKARLVDQGKLPLSFWKKRKTENEELKRSRLEEAVAACKGGKMSQAAASLTYHIPKTTIWRRLQQDGKKSKRSSNSKRRLINTVQNKEDKSQDTSNLTYCEISSEIPITYINENSIPEDSVIILTTDDVGGLNLEDARQIIVNSVKGKETPKTEKPTDAVSKEAKNEPQKETGSKEAPSSSSSSSSTSAKKSGSTWSFGGSFGAGGRSGGSSKPFETGDKDKMMLTFGVIGAVGILGFLLFSDFSVKEITWREFVYSYLNKGIVEKLEVVNKKWVRVHLTPGNSADGSNVLWFNIGSTDSFERNLEVAQLELNIEPQNHIPVIYKNEMEMGTLISYLPNIFMLLVVLYLMRRSAEMMGGKGGRKGGLFGGVMESTAKLINSNEIGVRFKDVAGCEEAKIEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFAMARKHAPCILFIDEIDAVGRKRGGRNFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDILDKALLRPGRFDRQIFVPAPDIKGRASIFKVHLGPLKTNLDKVQLARKMASLTPGFTGADIANVCNEAALIAARDMLDNIQLKHFEQAIERVVAGMEKKTNVLQPEEKRTVAYHEAGHAIAGWFLQHADPLLKVSIIPRGKGLGYAQYLPREQYLYTKEQLFDRMCMTLGGRVSEEIFFGRITTGAQDDLKKITQSAYAQVVHYGMNEKVGNVSFDMPQPGDMVMDKPYSEHTAQLIDKEVQDLIKSAHKRTLALLTQHKEDVRKVAERLLKQEILSRDDMIELLGPRPFPEKSTYEEFVEGTGSIEEDTSLPEGLKGWNESKQPSDTDGKSKEKEVAPEGQQQPITSTTTTSNPPNKDQSQHRV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00754885;
- 90% Identity
- iTF_00754885;
- 80% Identity
- iTF_00754885;