Basic Information

Gene Symbol
onecut
Assembly
GCA_018340375.1
Location
Contig2:42624692-42795288[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.2e-38 1e-33 115.5 0.5 3 78 566 641 564 642 0.97

Sequence Information

Coding Sequence
ATGGAAGGTATAGGGAACATAGCCGATCATCAATCGCATAGCGAGCAATTATTGGACTCGGTCGATTCCCCTCGGACAGTGGGAGGAACGGTGCAAGGGGTAGTGGCGGTCTCTACGCATGGCCGGAACAGCAGCGGGGGTGGTTCGAATGGGAACTGTGGTACAGGGGGCGGCGGAGGAGGAAGAATACTCTCCTCTTCGAGCGGTAACGGAGGGGGAAGACTTCTCCATCACCACCACCATCCCCACCACCAACATAATCACAATCACCACCACCAACATCAACAGCAACACTATCATCAAAGACAGCAACAACAACAACAACAACAACAGCACCACGAGCATCATCACGAGCACGAGGTTGTCATTGGGACTACGGCGGGAGCAGGTGCGAATAGTGGGGGCCTCGGTGGAGGTAGGGGCAACGGTAACGGTGGTGGGGGTGGGAGCAATAGTAGGAACGGGGATAGTGGAAGTATCGAGGGGATGTCGTCGGCTTCTCAAAGCCCCGATATCGCGTGCGCAGGCCTTCCTTTGGAACTGCTCGCGGCTGGAACGCTCAGCGTTAAGGAGGAGCGAGACCTCGTTGCTTCGGCGGAGGATCTGTCGTCGTCTCAGGAGCCACCTGGGGTGGCCGGTGGTAGCGGCGGTAGTGGTGGTACTAGTGGTAGTAGTGGTAGTGCCGGTGGTGGTAGTAATAGTTGTGGTGGTGGTGGTGGTGCTAGTGCAGGTTGTGTCGGAGGTGGCTCGAGGGGAGGAGGTAGAGCAGGCGCGAGGGAATCCCTGTCGGTGATCGTGCCGCCTCAGGACGTGGACGTGGATTCGCGCGACGCTGACTCGGAACTCCTCAGTCCGGGTAAGCTTACGCCGACCTCAGGGATCAGCGTCTCGGTCGCGAGTATGATCGACGCGACGGACTTCAGGGCGATGCAGCCGGAACCGACTTATCAGACCCTGACCTCGGTCGCGGAGAGAATGTCGCCACCCGGTTTTAGTCCCGGCTCATCTTACGCTACTTTGACACCTTTACAACCTTTACCACCTATATCGACGATGAGTGACAAGTTTGTTTACGGTGGACACGCGGCCGGGGGGGTTACCGGGAGTTTCGCCGTTATGCAAAACAACGGTCTCGGAAATATCGGCCTCGGTATGGGCGGTTCACCTTACACTTACGACAAATTACCCTCGATGGGTATGTCGCCGCCGCACAATTATCCTTCGCCCGGTGCTGGATTACAACCAAGCCCGTTGTCGCCTCAAAGCGCCTACTCTCAATCGGGGCTTAATTCGCCTCATAAATCTTCGGCGAGTCCGCATTACGATCCGGCCTTCTTACCAAGGTTACAACAAAGTCCGGTAGCCTTAAGTCCCTCGTCACCTCCAACGGTTTCGGCAACCGCGAGTTTCGCGCCATCTCATCATTCCCCTCCTACGCACTCGGTACCGGCAGCCTCGCCTCCACCCTCGATGCAAACGCAGTTGCAACAACAACAACAACAACAACAACAGCAACAACAACAGCAGCAACAGCAACAACAACAGCAACAGCAGCAGCAACAACAACAACAACAACAACAACAACCACAGCAACCTATACCGCAACAAACGATAGCTCACACGCAACATCAAGTGCAACATACGTCGGTAGTGATGAAGACTGTGTCGGCGGCCGGCAACGGAGCCGGAGAAGTCGAAGAAATTAACACCAAGGAATTAGCTCAGAGAATCAGCGCGGAACTCAAGAGGTACAGCATACCGCAAGCCATTTTTGCTCAAAGGGTGCTCTGTCGTAGTCAAGGTACTCTCAGCGATTTACTACGTAATCCTAAACCTTGGTCTAAACTAAAAAGTGGTCGGGAAACTTTCCGACGGATGTGGAAGTGGCTGCAGGAACCCGAGTTCCAAAGGATGTCCGCTCTACGTCTCGCAGCCCTGAGCAACTGCTCTGAGAGCGGCGGTGATGCGGAAGCCATGCTGGATATCCACCATCCAGGATCCGGGATCGAGTCTCACCATCAACAGTTTCACAACTCCTATGCTGCACAGATTCCACAACGAGGAACTTGCAAGAGGAAAGACGAGATGGCGACCCAAGCAGAACACCAACAGCCCGCCCCCAAGAAACCACGACTGGTTTTCACAGACCTACAGCGCCGTACTCTACAGGCTATTTTTAAAGAAACCAAGAGGCCATCGAAGGAGATGCAGGTGACAATCGCCCGGCAGTTGGGCCTTGAACCAACGACGGTTGGCAACTTCTTTATGAACGCGAGACGACGCTCCATGGATAAATGGAAGGATGAGGATCCAAAAACCGTAGCTGTCGACGAAGGACAATTGTCCCCAACGATAGGGATAGGTGGCGGAGGTGGCGGTGGAGGTGGTCAACAACGCCAGCAAAGCGACGTTTTGTGA
Protein Sequence
MEGIGNIADHQSHSEQLLDSVDSPRTVGGTVQGVVAVSTHGRNSSGGGSNGNCGTGGGGGGRILSSSSGNGGGRLLHHHHHPHHQHNHNHHHQHQQQHYHQRQQQQQQQQQHHEHHHEHEVVIGTTAGAGANSGGLGGGRGNGNGGGGGSNSRNGDSGSIEGMSSASQSPDIACAGLPLELLAAGTLSVKEERDLVASAEDLSSSQEPPGVAGGSGGSGGTSGSSGSAGGGSNSCGGGGGASAGCVGGGSRGGGRAGARESLSVIVPPQDVDVDSRDADSELLSPGKLTPTSGISVSVASMIDATDFRAMQPEPTYQTLTSVAERMSPPGFSPGSSYATLTPLQPLPPISTMSDKFVYGGHAAGGVTGSFAVMQNNGLGNIGLGMGGSPYTYDKLPSMGMSPPHNYPSPGAGLQPSPLSPQSAYSQSGLNSPHKSSASPHYDPAFLPRLQQSPVALSPSSPPTVSATASFAPSHHSPPTHSVPAASPPPSMQTQLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQPIPQQTIAHTQHQVQHTSVVMKTVSAAGNGAGEVEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLAALSNCSESGGDAEAMLDIHHPGSGIESHHQQFHNSYAAQIPQRGTCKRKDEMATQAEHQQPAPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDEDPKTVAVDEGQLSPTIGIGGGGGGGGGQQRQQSDVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_00754470;
80% Identity
iTF_00754470;