Basic Information

Gene Symbol
osa
Assembly
GCA_018340375.1
Location
Contig21:4485358-4542425[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.4e-25 7.7e-22 77.8 0.0 2 89 834 921 833 921 0.92

Sequence Information

Coding Sequence
ATGGCTGCAACGCAAGCCGAGAGCCAGCAAAACGATGTGAAACTTAATGAGTCTGTGAAATGCGCACAGAAGCGCTCGCAAGTCGGTGGAAATAGTGCAAGTGTTAGTACAAAACAGCAGCTGGATCCAGAGCCGGGGGAGGTAGTATCCCGGGGCGCGGCCCAGCTGCTTAAATATGTGAATCGCGGCGGGGACACAGGTTTCGAGATGAGTCAATACCGCGAGGACATTGTTGGACACACTACCGGTGAAGTCAAATCGCCCCGAGAAACGGTACAAACTTCTCAAGAACCGATCGGCAAACAGGAATCTCTTGATCCAACTGGACATTCGAGTCATCCGGGACATTCGTACCCGCCGAACGCTATTCGCGATTATTCCGAGGATTACAGTAACAAATCGAACGAGTTTGTTTCCAAGCCCTTGACCGATTATCCTGCTAAACAAGTGCCGGAATACGTTGGAAAACATGGAGAGTTTACGGGAAAACCATTGGATTATCATGGTACTACCCCAGGCAGTTTCCCAGGACAGCCAAGATTCTTGTCGGGTCAAAGTATATCGCAAGCTACAGGTCCAACTCCTACTTTAAATCAATTATTACAAGCGTCTACTCCTGTACATCGTTTTCATGGAAATTATCCTGGAATGGGACCTGAATCTTATCAACAGCCATGGCCTATGCAACGACCGCCAGTCGTTCCCCCTGTTTACCCTCAGCCAAGCCAACGTCCCCCACAAACGGGTTCCCCGAGGTTACACGGAGGCCCTGGAGGGCCAAGTTCTCCAACCCCAATGTCGTATCAACCGTACGCTCAACGTTATTCTTCACCCGCAAGATCTCACGCGCCGTACAGTCATCATCAGTTGAATTCATACACGGCGCAAGGAGCTCATCCTCCCAATTTATACCCTGAGCAAAGAGGATGGAACCAAGGTGGGCCTCCAAATCCACCTCCCCCACCACCTCCGCCCCCAGCTAATCAAGCGAATCCTTCGAATCAATCGCCACAAAGGGCTCTTTCGCAATCCCCGGCGTCGCCCCCTTCCGCTTCCCCGCAACCGCAAACAACCAACCAACCGCAAAATTTCCACAATCTTCAGCAGAGGTCAACAACACCAAATACTCAAGGCATCGATTCTGGGGAACTATCGGGTCAAAATAGTAATGACAGCTCAAATGGACCTGCTTGCCCAGGGACACCAAATTCACAGGGGATGAGGCCGACCCCTTCACCTACAGGATCCACAGGTTCTCGCTCCATGTCTCCAGCTGTTGGCCAACAAAACGTTCAAATGCCTCCACGGCCGTCAAGCAGCCAGTCAGATGGTAGTGGATCAGCACGCATGAGTCACTCTCCTATGACAAATCAAAATATATACCAACAACCATTGGGTTCTTCACCGCATATGCATAGCTACAAAATTAACAGCAGTAACCCTGGGATGGTTCAACCAGGGCCTGGTTCGACAAATTTGGGTGGAATTAGCTCAATGGGCGGGGGGATGGGGTATGCAGCCAGTAGCACGGCTGCGGGTCAGCCCGGTGGTTATCATGCTCAAAGTACCTATCCACCTTCGCGTACACACATGCAGTTCCCGCAAGGATATCCATCTCCGGCGAATTCTCAACCACCATCTAACAATCAATATCAACCTCCTAATAGACCAAACAATTTGGTGCAATATCCCCCTTATTCGCATAAAATGGGCTTCAACAGTGTGCCCCCTATGCCTCCCAGCCCAGGCCCTCCACAAGTTTACGGGAGTAGCGGGAGTACAGGAATGGTACCTCCAGGTTCATCGGGAATAGCTGTCATCGGTAACATGGGTCCTCCTGCGAGTTCAATGGGCCCACCTCCGCCATCCCCGAACCATGTCAGCAATCAATCTCCATCCACTAGCTCAACGGTCTCTCATTTGCATACCTCGGCAGCAACTCCACCGTTAAATCACGAGGGCAGCCCTATGCCACCACCGAGCACTACACCTAATTCTCATCCCGTATCAGTGCCAATACCAGCAAGCCATAATTCAACAGAATTAACAGCTGAAACTTCCAATGATATTAGTATAACTACAACTGCTTCAGGCACGTCTGCTATAAATGTGACATCAACATCAAGTGGCACTGTAACGTCTGTAATAACAACTGGCCCAGATGGTACGTCTCTTGATGAAGGCTCACAACAGTCAACATTGTCTAATGCTTCCGCTGCTTCTGGAGAGGATCCAGCATTCACACCAAAGGCTCGCAAAGAGATGATGGGAGGGTATCATAGTCATCCAGCTACACCACAAAGTACAGTTCCATCTCCTGGAGCTGCTAGTATCAATTCGATTCACGAAGAGTATTCTGATATGAATAGCCCTGGTTGGCCACGCACACCTGCTAGTCCTGTACGTAAGGTGTTTAACAGTCACGTGCCTCAAGACCCGTACAGATCTAAGAAACCAGATAGTTTGGCAAAATTATACGAGATGGATGATTCTATGGAACGGAGAACCTGGTTAGACAAATTGGTTACATTTATGGAAGAACGAAGGACACCGATTACCAGCTGTCCAACCATCTCCAAGAACCCCCTCGACCTATTTCGGCTGTACCTTTACGTGAAGGAAAGGGGGGGTTTCATGGAGGTATGCAAGGTAACAAAGAATAAAACCTGGAAAGATATAGCTGGTTTGCTTGGTATCGGTGCAAGCAGCAGTGCGGCATATACCTTACGCAAACATTACACTAAGCATTTGCTGCCGTACGAATGTCAATTCGATCGTGGAGGTGTTGATCCACAACCCATCATAAATCAAGTAGAAGCTGGATCGAAGAAAAAGGGTTCCAAGAATGCCGCATCTGTCCCTTCGCCTGGATCTTCTAATTCTCAAGATTCGTTTCCTGCGGCGGGATCGAGTAACACCTCGATGGACGGTTACGGAAGTTATCAAGGCAGTTATACAGCTGGAACTCCAGGTATACAAGGTAGTTACCAGAATGCTGGTTCTTATCAAAATTATCCTCAAGAGCAGTATATTCGACCTCAAGCCAATACATTATCTCAACAAGGAGAATTTAGTCAACCATACTCTTCTCGTTCTCATTATCCACCTTACATGCCAGACGTCGATAGGGGATATCCTGGAGCCAATATGCCACCAAACAACACCGCTGGACAGGATATGTACAACAGATACAGTAGTAGTCAACAACCTGGAAGTTACGCAGGAACACCTCCCACCGCTCGGAACAACAATTATTCTACCGCGGCACAATCTCATCCGGCTAATGTTCCACAACAAACGGCTACCAGCCAACCTTCTTCTCCTTCACAATCCCCCGCTAGTACATCATACCCATGCCCTCAAGAATATTATAGGACAGAGCAGGGTGGATATGGAACCAGTGGAAATCAAATTTATCCTGCAAGCGGAGCTACCAATAAAAATATGCCTCCCCCACCTCCAGGTCCCACCCAACCTAGGCGTCATCCTGATTTTGCCAAAGATCAACAATATCCTCAGTATAATCAACAACGACCAGCTTACCCAGGATGGCCAAATGCGCCGGCAAATCAATACAACAGTAGCAGTGGAAACAACAGAGTTCAATATCCAAACCAACAACCACAAACGCAATCGCAACCACCGCAAGTGTCACCTCAAGTTGCTCCCACCACTTCGGCAGTGTCTGGGGTTGGGACAATACCCAGCGCTCAACAATGGGCTACTCAGCAACCCAGCAGACCATCGTCTCAACAAACTTTGAATACCGTAGCTCATCCACCTTCGCCATGGGAACATCGTTATCCGAATCAAGCAACGCCCCTGTATCCACCTCCTCCGACACATCAAAATCAGCTTGGAATAAGTCCCATGATCAACCAACCGCCAGCATCGAAAAGAGAAATGACATTTCCTCCTGATAGCGTAGAAGCGGTAACTCCCCTTTTATACAAACGCCGGAAACTGACTCGCGTGGACGTGGCACCGGTAGAGGCTTGGCGTATCATGATGGCATTACGCTCGGGATTACTCGCTGAAAGTTGTTGGGCTCTCGACGTTTTAAATATATTATTATTCGACGACACGTCTGTGTGTTACTTTGGATTGGCGCATTTACCTGGATTATTGGATGTTCTTCTGGAACATTTCTCACGATCCCTTTCCGACATGTTTGAATCTTCGGAAAACGAAGATGATTGTTGGGGTCAAACGAAAGATGGTCCCGAAGTAGACCTTGGTGCTGTAACTCGTCCCGTAGACGTCGAGGATCGAACTAAATTATTGTCAACCTCAAATTACACGTTTCTGTCAAGAAGAGGACGTCCTGTAAAAATGATACCCAGAGACGAGGATTTGTTTATTTTGGATACGCGTAGGCAGTGGGATCACGAGGATTACGAACCAGAGATCGAGCCCTGGCAAGTAGACAGCACAACTACCAAGTATATCGTAACGTGCTTTCAATCCGAAATAGGTTCAATTCCTTTCGCCCGTCTTTTGAGAGACGAAAAGCCTCCTCTTTTAGAGAAGGAAGTTGAAAATGTGGAGTCGAAGGACGAAGCTAAAGCGGATAATAACGAAACGATAGAAGCCTCTTCGGGTTCTCCGCTTAGGCAAAATGAATTCGGCGAGGGGACGTCCAAGGACGCCAACGAACGGAGACAAACGACGGATAAAAAGAAGAGAACGAAAACTTTGAGCGACGTCATATCGAGAATAAAGAAAGAACCGGTCGAAATGAACGATCTTACGAGAGAATTGTTCGAGAAGAAGAACAACGATGGGTTCAAAAAGGAATGCGAAACCGAGACTAAAGCGAATAACAATATGGGCGAACATTTCGTTAATATAACTCCGAAAACGGAGGATGATGTGTTCATCAATCAAAATGGATTGAACAATTCGACAAACTCGGAAAATTTGGAAAACAGAGAGGAGGGACAAGGACAACAACAACAGCAGCAGCAACAGCAACAATCGGATGGTGTTGTCGATAATAAGCAAGAGCCCGCAGACGAGCCTACGGACGCGGAACCGAGAGACGAGCAACAGGAGGGACCAAGATTAGATATAAAAGATCCAGCGGGTACATTAAAGAGAAGACGAATAAGCGATTACGAGGACGAGAGTTATTCGAGGGACGAGGCGAGTCTCTATCTCATAACCGAAACACAAGACAGTTTAGCTCGACGTTGCGTTTGTCTGTCGACGATTTTGAGAAATCTCACGTTCATTCCTGGAAACGAATCGGAGTTCGCTAAAAATGTCACGTTCCTGAGTCTTCTTGGTAAATTATTATTGCTACACCACGAACATCCTGTGAGAGCCCAAAAGACGCGAAACTACGACCGAGAAGAGGATGCAGATTTTGCGGATTCGTGCAGTAGTTTACAAGGTGAAAGTGAATGGTGGTGGGATTTTCTGCATCACATAAGAGAAAACATACTCGTGATGGCGGCTAATATATCCGGACATATGGATTTGAGTCAATATCCGGAAGAAATATCTCGGCCGGTTCTCGACGGGCTTTTACATTGGGCGGTATGTCCGGCAGCTCACGGGCAAGATCCCTTCCCGACCGTCGGTTCGAATTCCTCTTTATCGCCGCAAAGACTCGCTTTGGAAGCTTTATGTAAACTTTGTGTGACCGAATGTAACGTCGATCTCGTTGTCGCTACTCCACCCTACTCTAGGCTTCAGAGACTTTGTTCCGTATTGACGAGGCTACTTTGTCGAAGCGAAGAGCAGGTGTTGAGGGAATTTGGCGTTAATTTGTTGCACTTCCTTTCGGCCGCTGATAGCGGCGTAGCGCGAACTATAGCATTACAAACACCTTGCGTGGCATTGCTCGTTGCTTTTATCGAACAAGCGGAGACGAGTGCTCTTGGTGTCGCGAACCAGCACGGATTGGCCGCGTTACGCGACAATCCGGAGTCAATGGGGACTAGCCTCGATATGCTGAGACGAGCAGCTGGCACGCTTCTCAACTTGGCCAGGCATCCGGACAATAGAACCCTTTTGCTCCAGCACGAATCACGTCTTCTCGCTCTTGTTATGAGCCAAATTCTCGATCAACAGGTCGCAGCGATAGTGGCGCGTGTGCTATTTCAGTGTTCCAGGAGCACGTAA
Protein Sequence
MAATQAESQQNDVKLNESVKCAQKRSQVGGNSASVSTKQQLDPEPGEVVSRGAAQLLKYVNRGGDTGFEMSQYREDIVGHTTGEVKSPRETVQTSQEPIGKQESLDPTGHSSHPGHSYPPNAIRDYSEDYSNKSNEFVSKPLTDYPAKQVPEYVGKHGEFTGKPLDYHGTTPGSFPGQPRFLSGQSISQATGPTPTLNQLLQASTPVHRFHGNYPGMGPESYQQPWPMQRPPVVPPVYPQPSQRPPQTGSPRLHGGPGGPSSPTPMSYQPYAQRYSSPARSHAPYSHHQLNSYTAQGAHPPNLYPEQRGWNQGGPPNPPPPPPPPPANQANPSNQSPQRALSQSPASPPSASPQPQTTNQPQNFHNLQQRSTTPNTQGIDSGELSGQNSNDSSNGPACPGTPNSQGMRPTPSPTGSTGSRSMSPAVGQQNVQMPPRPSSSQSDGSGSARMSHSPMTNQNIYQQPLGSSPHMHSYKINSSNPGMVQPGPGSTNLGGISSMGGGMGYAASSTAAGQPGGYHAQSTYPPSRTHMQFPQGYPSPANSQPPSNNQYQPPNRPNNLVQYPPYSHKMGFNSVPPMPPSPGPPQVYGSSGSTGMVPPGSSGIAVIGNMGPPASSMGPPPPSPNHVSNQSPSTSSTVSHLHTSAATPPLNHEGSPMPPPSTTPNSHPVSVPIPASHNSTELTAETSNDISITTTASGTSAINVTSTSSGTVTSVITTGPDGTSLDEGSQQSTLSNASAASGEDPAFTPKARKEMMGGYHSHPATPQSTVPSPGAASINSIHEEYSDMNSPGWPRTPASPVRKVFNSHVPQDPYRSKKPDSLAKLYEMDDSMERRTWLDKLVTFMEERRTPITSCPTISKNPLDLFRLYLYVKERGGFMEVCKVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKHLLPYECQFDRGGVDPQPIINQVEAGSKKKGSKNAASVPSPGSSNSQDSFPAAGSSNTSMDGYGSYQGSYTAGTPGIQGSYQNAGSYQNYPQEQYIRPQANTLSQQGEFSQPYSSRSHYPPYMPDVDRGYPGANMPPNNTAGQDMYNRYSSSQQPGSYAGTPPTARNNNYSTAAQSHPANVPQQTATSQPSSPSQSPASTSYPCPQEYYRTEQGGYGTSGNQIYPASGATNKNMPPPPPGPTQPRRHPDFAKDQQYPQYNQQRPAYPGWPNAPANQYNSSSGNNRVQYPNQQPQTQSQPPQVSPQVAPTTSAVSGVGTIPSAQQWATQQPSRPSSQQTLNTVAHPPSPWEHRYPNQATPLYPPPPTHQNQLGISPMINQPPASKREMTFPPDSVEAVTPLLYKRRKLTRVDVAPVEAWRIMMALRSGLLAESCWALDVLNILLFDDTSVCYFGLAHLPGLLDVLLEHFSRSLSDMFESSENEDDCWGQTKDGPEVDLGAVTRPVDVEDRTKLLSTSNYTFLSRRGRPVKMIPRDEDLFILDTRRQWDHEDYEPEIEPWQVDSTTTKYIVTCFQSEIGSIPFARLLRDEKPPLLEKEVENVESKDEAKADNNETIEASSGSPLRQNEFGEGTSKDANERRQTTDKKKRTKTLSDVISRIKKEPVEMNDLTRELFEKKNNDGFKKECETETKANNNMGEHFVNITPKTEDDVFINQNGLNNSTNSENLENREEGQGQQQQQQQQQQSDGVVDNKQEPADEPTDAEPRDEQQEGPRLDIKDPAGTLKRRRISDYEDESYSRDEASLYLITETQDSLARRCVCLSTILRNLTFIPGNESEFAKNVTFLSLLGKLLLLHHEHPVRAQKTRNYDREEDADFADSCSSLQGESEWWWDFLHHIRENILVMAANISGHMDLSQYPEEISRPVLDGLLHWAVCPAAHGQDPFPTVGSNSSLSPQRLALEALCKLCVTECNVDLVVATPPYSRLQRLCSVLTRLLCRSEEQVLREFGVNLLHFLSAADSGVARTIALQTPCVALLVAFIEQAETSALGVANQHGLAALRDNPESMGTSLDMLRRAAGTLLNLARHPDNRTLLLQHESRLLALVMSQILDQQVAAIVARVLFQCSRST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00219586;
90% Identity
-
80% Identity
-