Gbil021652.1
Basic Information
- Insect
- Gnoriste bilineata
- Gene Symbol
- stc
- Assembly
- GCA_026546565.1
- Location
- JANSWN010011770.1:4476-7511[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2.6 1.7e+04 -3.9 1.6 15 19 240 244 239 244 0.81 2 14 0.12 8.1e+02 0.4 0.5 4 10 273 279 272 281 0.94 3 14 0.0013 9.1 6.6 19.8 3 18 286 301 275 302 0.84 4 14 0.0013 8.9 6.6 8.6 1 18 338 355 338 356 0.93 5 14 5.3e-05 0.37 11.1 17.1 1 19 396 414 386 414 0.85 6 14 1.8 1.2e+04 -3.4 1.5 6 10 445 449 445 449 0.96 7 14 8.2e-06 0.056 13.7 13.1 4 18 462 476 455 477 0.86 8 14 0.0012 8.4 6.7 6.6 1 11 517 527 517 530 0.96 9 14 1.5 1e+04 -3.2 0.8 5 10 533 538 531 539 0.59 10 14 6.3e-10 4.3e-06 26.8 14.1 1 18 544 561 544 562 0.97 11 14 2.5 1.7e+04 -3.8 0.5 6 10 591 595 590 595 0.85 12 14 3 2.1e+04 -7.3 9.8 10 18 609 618 598 619 0.76 13 14 2.5e-07 0.0017 18.5 9.8 1 16 655 670 655 677 0.88 14 14 0.00053 3.6 7.9 12.2 4 19 689 706 687 706 0.91
Sequence Information
- Coding Sequence
- ATGGAAAAGAAGAAACAATACGATTTCAAGTCAAACAACGATTTCCAatcgaatcgagattaccgagatcagcaatcgaatcgagatcaccaatcaaatagagatcaccaatcaaatagagatcagcaatcgaatagagatcagcaatcgaatcgggattaccgagatcaccaatcgaatcgagatcaccaatcgaatcgagatcaccaatcgcatcgagatcaccaatcaaatagagatcagcaatcgaatcgagataaccaatcgaatcgggatcatcaatcgaatcgagatcaccaatcgcatcgagatcaccaatcgcatcgagatcatcaatcgaatcgagattaccgagataaccaatccaatcgagatcagcaatcgaatcgagattatcgagatcttcaatcgaatcgtgatcaccaatcgaatagagattaccaatcgaatcgagattacaaatcaaaaaatgaattcaaatcgaaccatgaattcaaatcgaatcgTAACAATTCCGAACAAAACAAAGAGGTTGATTGTTCGCAACGTGAAAAACTTATACGTGAAATAGATGTCGGCCGATTGGAATGTTTGGTTTGCTGTGAAAGTATTAAAACTTTTCAACAATGCTGGTCGTGTACGAATTGCTACCATATCATGCATCTGAGCTGTGTCATAAAATGGGCAAATAGCTCAAAATCGGAAGCCGGCTGGCGTTGTCCGGCATGCCAACACATAACCGAAAAAACGCCACACGAATACTATTGTTTTTGTGGCAAAATGAAAAATCCACCGTTCAATCGTAACGATGTGGCTCATTCGTGTGGTGAATTGTGTGGTAAAAAAGATGCGTGTGAGCATCCGTGTCGTATGCTATGCCATCCGGGTCCTTGTCCAACGTGTCATGCTAGTGTGACACGTAGTTGTGGATGTGGTCGTAGCAACAAAACAATGCAATGCTGTCAAAAAGAAGAAATCAATTGTGTCGAAGTTTGCGATAAATTACTGAATTGTTCCGAGCATCGATGCACAGACATCTGCCATGGCGATATATGTACCGAATGTGTAATCACAGTCGAACACAAATGCTACTGCAACAAAGATAGTAAAGAGGTCGCATGTACGGCCGAAACTAATGCCGAAAAACAATATTCGTGTGGAAAAAAATGTGGTGGCCAATTGACGTGCGAACGACATAAATGTAAAGATATATGTCATGCTGGTAAATGTGGCGAATGCAAATTACTTCCAGAAACGATTACATCTTGCCCATGTGGAAAAACGCCTATCATACAGGGACAACGAAAGATTTGTACAGACGCAATACCACTGTGTCAATCAGTATGTGGTAAACCATTAAAATGCGGTCAACCAAATTCACCGCATCAGTGTCAAAGCAAATGTCATTTGGGTGCATGTCCAACGTGTAATAAGGAAACTGCCATCAAGTGTCGTTGTGGACAAATGGAACAGATGGTGAAATGCCGAAATTTACTCACCCGTGCCGACGATGCACGATGTAAAAAGCGTTGCACCAAAAAACGCAATTGTGGCAAACATAAATGCAATCAAGAGTGTTGCATTGATATCGATCATATATGTCCGCTGCCGTGTAATTTTAATTTATCATGCGGAAAACATAAATGCGATCAGACTTGTCATAAAGGAAGATGTCAACCATGCTATCGTAGTTCATTCGTTGAATTATATTGTGAATGTGGAGCCAATGTGATATATCCACCGGTACCGTGTGGTTCAAAGAAACCACCTTGTGATCGTCTTTGTGCGCGTACACACGCTTGTGATCATCCCGTACAGCATAATTGTCACTCGGCGGCAACGTGTCCACCATGTATGGCATTCACTACCATCTATTGTCATGGTAAACATGAACAACGCAAAACCATTCCATGCAGTCAGGGTGAATTTTCGTGTGGATTAAAATGTAATCGTCCGCTACGTTGTGGTCAACATAAATGCATAAAAATTTGCCATGGCGGTGCCTGTGAATTGGAAAAAGACGTATGCAAGCAACAATGTGTAAAACCACGACACATGTGCGCCCATATCTGTGGTTCACCATGCCATTCAGGTTTGTGTCCGGATACACCGTGCCGTGAACAGGTAGAAGTTTTGTGTCAATGTGGAAATCGTAAACAAATCCGAACGTGTCAAGACTTTTCCACGGAATACCGACGCATAGCATCGGCTAAATTTGCATCGACAATGGAAGACATGCAGCGCGGCAATGCCATCGAATTGGCTGACGTATTGGGTCCGGTCAAATTAAATAACAACAAAACATTGGATTGCAATGAAGAGTGTAAAACATTAGAACGTAATAGGAAATTAGCAATGTGTTTGCAAATTCGTAATCCGGAAATTTCATCGAAACTACAACCCAAATATTCTGAATTTATCAAAGGTTGGGCACGAAAAGATCTACAATTGGTTACAATGATTCACGATAAATTGACAGAATTGGTTAAGCTGGCCAAACAAAGCCAACAACGTTCGCGCAGCCATTCGTTCCCAACTATGAATAGAGAAAAGCGACAGCTGGTGCATGAGATGTGTGCAATGTTTGGTGTGAAATCAGTTGCCTATGATGCCGAACCAAATCGGAACGTGGTTGCTAATGCCACTAAAGAAACATCTTGGCTGCCTGGTATGAGCATCCTGGAGGTGTTAAAACGAGAAAATGGACAGCGACGCATACCAGTTCCCAGTAATAATGCATGGGGATTCAAGGGATAG
- Protein Sequence
- MEKKKQYDFKSNNDFQSNRDYRDQQSNRDHQSNRDHQSNRDQQSNRDQQSNRDYRDHQSNRDHQSNRDHQSHRDHQSNRDQQSNRDNQSNRDHQSNRDHQSHRDHQSHRDHQSNRDYRDNQSNRDQQSNRDYRDLQSNRDHQSNRDYQSNRDYKSKNEFKSNHEFKSNRNNSEQNKEVDCSQREKLIREIDVGRLECLVCCESIKTFQQCWSCTNCYHIMHLSCVIKWANSSKSEAGWRCPACQHITEKTPHEYYCFCGKMKNPPFNRNDVAHSCGELCGKKDACEHPCRMLCHPGPCPTCHASVTRSCGCGRSNKTMQCCQKEEINCVEVCDKLLNCSEHRCTDICHGDICTECVITVEHKCYCNKDSKEVACTAETNAEKQYSCGKKCGGQLTCERHKCKDICHAGKCGECKLLPETITSCPCGKTPIIQGQRKICTDAIPLCQSVCGKPLKCGQPNSPHQCQSKCHLGACPTCNKETAIKCRCGQMEQMVKCRNLLTRADDARCKKRCTKKRNCGKHKCNQECCIDIDHICPLPCNFNLSCGKHKCDQTCHKGRCQPCYRSSFVELYCECGANVIYPPVPCGSKKPPCDRLCARTHACDHPVQHNCHSAATCPPCMAFTTIYCHGKHEQRKTIPCSQGEFSCGLKCNRPLRCGQHKCIKICHGGACELEKDVCKQQCVKPRHMCAHICGSPCHSGLCPDTPCREQVEVLCQCGNRKQIRTCQDFSTEYRRIASAKFASTMEDMQRGNAIELADVLGPVKLNNNKTLDCNEECKTLERNRKLAMCLQIRNPEISSKLQPKYSEFIKGWARKDLQLVTMIHDKLTELVKLAKQSQQRSRSHSFPTMNREKRQLVHEMCAMFGVKSVAYDAEPNRNVVANATKETSWLPGMSILEVLKRENGQRRIPVPSNNAWGFKG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -